RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 DZIP1LQ8IYY4 767 aaKnown RBP37■■■■□ 3.51
CHKB-212ENST00000492582 USP31Q70CQ4 1352 aa36.99■■■■□ 3.51
CHKB-212ENST00000492582 PMFBP1Q8TBY8 1022 aa36.98■■■■□ 3.51
CHKB-212ENST00000492582 RGS3P49796 1198 aa36.97■■■■□ 3.51
CHKB-212ENST00000492582 NPM2Q86SE8 214 aaKnown RBP36.97■■■■□ 3.51
CHKB-212ENST00000492582 CALD1Q05682 793 aaKnown RBP36.97■■■■□ 3.51
CHKB-212ENST00000492582 FTSJ3Q8IY81 847 aaKnown RBP36.97■■■■□ 3.51
CHKB-212ENST00000492582 PCDHB15Q9Y5E8 787 aa36.96■■■■□ 3.51
CHKB-212ENST00000492582 TTC21AQ8NDW8 1320 aa36.95■■■■□ 3.51
CHKB-212ENST00000492582 PIK3R4Q99570 1358 aa36.95■■■■□ 3.51
CHKB-212ENST00000492582 PEAK1Q9H792 1746 aa36.94■■■■□ 3.5
CHKB-212ENST00000492582 TRIM27P14373 513 aa36.94■■■■□ 3.5
CHKB-212ENST00000492582 EIF4A2Q14240 407 aaKnown RBP36.94■■■■□ 3.5
CHKB-212ENST00000492582 FAM161AQ3B820 660 aa36.94■■■■□ 3.5
CHKB-212ENST00000492582 RGPD8O14715 1765 aaPredicted RBP36.93■■■■□ 3.5
CHKB-212ENST00000492582 DLG5Q8TDM6 1919 aa36.93■■■■□ 3.5
CHKB-212ENST00000492582 THUMPD2Q9BTF0 503 aaKnown RBP36.93■■■■□ 3.5
CHKB-212ENST00000492582 PAK3O75914 559 aaPredicted RBP36.92■■■■□ 3.5
CHKB-212ENST00000492582 ALDH1L2Q3SY69 923 aa36.92■■■■□ 3.5
CHKB-212ENST00000492582 ATF7IPQ6VMQ6 1270 aa36.92■■■■□ 3.5
CHKB-212ENST00000492582 LAS1LQ9Y4W2 734 aaKnown RBP36.92■■■■□ 3.5
CHKB-212ENST00000492582 LMOD3Q0VAK6 560 aa36.91■■■■□ 3.5
CHKB-212ENST00000492582 IFT57Q9NWB7 429 aa36.91■■■■□ 3.5
CHKB-212ENST00000492582 C8orf34Q49A92 452 aa36.9■■■■□ 3.5
CHKB-212ENST00000492582 NOB1Q9ULX3 412 aaKnown RBP36.9■■■■□ 3.5
CHKB-212ENST00000492582 KIF16BQ96L93 1317 aa36.9■■■■□ 3.5
CHKB-212ENST00000492582 KCNA6P17658 529 aa36.9■■■■□ 3.5
CHKB-212ENST00000492582 ANKARQ7Z5J8 1434 aa36.89■■■■□ 3.5
CHKB-212ENST00000492582 ZNF853P0CG23 659 aa36.89■■■■□ 3.5
CHKB-212ENST00000492582 GNAI1P63096 354 aa36.89■■■■□ 3.5
CHKB-212ENST00000492582 ZNF428Q96B54 188 aa36.89■■■■□ 3.5
CHKB-212ENST00000492582 ZBTB47Q9UFB7 747 aaPredicted RBP36.87■■■■□ 3.49
CHKB-212ENST00000492582 NGDNQ8NEJ9 315 aaKnown RBP36.87■■■■□ 3.49
CHKB-212ENST00000492582 SETD1BQ9UPS6 1966 aaKnown RBP36.86■■■■□ 3.49
CHKB-212ENST00000492582 RGPD1P0DJD0 1748 aa36.86■■■■□ 3.49
CHKB-212ENST00000492582 ZNF142P52746 1687 aaPredicted RBP36.85■■■■□ 3.49
CHKB-212ENST00000492582 AEBP1Q8IUX7 1158 aa36.84■■■■□ 3.49
CHKB-212ENST00000492582 FMN2Q9NZ56 1722 aa36.84■■■■□ 3.49
CHKB-212ENST00000492582 IPO8O15397 1037 aaKnown RBP36.83■■■■□ 3.49
CHKB-212ENST00000492582 BRPF1P55201 1214 aaPredicted RBP36.83■■■■□ 3.49
CHKB-212ENST00000492582 SULT6B1Q6IMI4 303 aa36.83■■■■□ 3.49
CHKB-212ENST00000492582 RWDD1Q9H446 243 aaPredicted RBP36.83■■■■□ 3.49
CHKB-212ENST00000492582 HSP90AB2PQ58FF8 381 aa36.82■■■■□ 3.49
CHKB-212ENST00000492582 DDX19BQ9UMR2 479 aa36.82■■■■□ 3.49
CHKB-212ENST00000492582 PIK3C2AO00443 1686 aa36.82■■■■□ 3.48
CHKB-212ENST00000492582 MBIPQ9NS73 344 aa36.82■■■■□ 3.48
CHKB-212ENST00000492582 VAMP4O75379 141 aa36.81■■■■□ 3.48
CHKB-212ENST00000492582 ITPRIPQ8IWB1 547 aa36.8■■■■□ 3.48
CHKB-212ENST00000492582 CFAP44Q96MT7 982 aa36.8■■■■□ 3.48
CHKB-212ENST00000492582 MAP3K19Q56UN5 1328 aa36.79■■■■□ 3.48
CHKB-212ENST00000492582 FAM83GA6ND36 823 aa36.78■■■■□ 3.48
CHKB-212ENST00000492582 SOX12O15370 315 aa36.78■■■■□ 3.48
CHKB-212ENST00000492582 TMEM57Q8N5G2 664 aa36.78■■■■□ 3.48
CHKB-212ENST00000492582 ANKLE2Q86XL3 938 aa36.76■■■■□ 3.48
CHKB-212ENST00000492582 TSPYL6Q8N831 410 aa36.76■■■■□ 3.48
CHKB-212ENST00000492582 SBNO1A3KN83 1393 aa36.76■■■■□ 3.47
CHKB-212ENST00000492582 CHD2O14647 1828 aaKnown RBP36.75■■■■□ 3.47
CHKB-212ENST00000492582 FLT4P35916 1363 aa36.74■■■■□ 3.47
CHKB-212ENST00000492582 VIRMAQ69YN4 1812 aaKnown RBP36.74■■■■□ 3.47
CHKB-212ENST00000492582 ARHGEF10O15013 1369 aa36.73■■■■□ 3.47
CHKB-212ENST00000492582 DCTN1Q14203 1278 aa36.73■■■■□ 3.47
CHKB-212ENST00000492582 MRPL50Q8N5N7 158 aaKnown RBP36.73■■■■□ 3.47
CHKB-212ENST00000492582 PDZRN3Q9UPQ7 1066 aa36.73■■■■□ 3.47
CHKB-212ENST00000492582 USP54Q70EL1 1684 aa36.69■■■■□ 3.46
CHKB-212ENST00000492582 TWISTNBQ3B726 338 aaPredicted RBP36.69■■■■□ 3.46
CHKB-212ENST00000492582 ZBTB40Q9NUA8 1239 aa36.69■■■■□ 3.46
CHKB-212ENST00000492582 HDAC1Q13547 482 aaPredicted RBP36.68■■■■□ 3.46
CHKB-212ENST00000492582 ARHGAP45Q92619 1136 aa36.68■■■■□ 3.46
CHKB-212ENST00000492582 MARF1Q9Y4F3 1742 aaKnown RBP36.68■■■■□ 3.46
CHKB-212ENST00000492582 DDRGK1Q96HY6 314 aa36.68■■■■□ 3.46
CHKB-212ENST00000492582 C8orf58Q8NAV2 365 aa36.67■■■■□ 3.46
CHKB-212ENST00000492582 ELL2O00472 640 aaPredicted RBP36.66■■■■□ 3.46
CHKB-212ENST00000492582 NLRP6P59044 892 aa36.65■■■■□ 3.46
CHKB-212ENST00000492582 KDM4FA0A1W2PPD8 638 aa36.64■■■■□ 3.46
CHKB-212ENST00000492582 AMPHP49418 695 aa36.63■■■■□ 3.46
CHKB-212ENST00000492582 KDRP35968 1356 aa36.62■■■■□ 3.45
CHKB-212ENST00000492582 IGSF1Q8N6C5 1336 aa36.59■■■■□ 3.45
CHKB-212ENST00000492582 MCM10Q7L590 875 aa36.59■■■■□ 3.45
CHKB-212ENST00000492582 KIF24Q5T7B8 1368 aa36.59■■■■□ 3.45
CHKB-212ENST00000492582 CHL1O00533 1208 aa36.58■■■■□ 3.45
CHKB-212ENST00000492582 EYA1Q99502 592 aa36.57■■■■□ 3.44
CHKB-212ENST00000492582 PHF8Q9UPP1 1060 aa36.57■■■■□ 3.44
CHKB-212ENST00000492582 ABCC4O15439 1325 aa36.56■■■■□ 3.44
CHKB-212ENST00000492582 ADGRL3Q9HAR2 1447 aa36.55■■■■□ 3.44
CHKB-212ENST00000492582 CRB1P82279 1406 aa36.55■■■■□ 3.44
CHKB-212ENST00000492582 NUTM2GQ5VZR2 741 aa36.55■■■■□ 3.44
CHKB-212ENST00000492582 SMC5Q8IY18 1101 aa36.55■■■■□ 3.44
CHKB-212ENST00000492582 ABTB2Q8N961 1025 aa36.55■■■■□ 3.44
CHKB-212ENST00000492582 MTHFSDQ2M296 383 aaKnown RBP36.53■■■■□ 3.44
CHKB-212ENST00000492582 NPHP4O75161 1426 aaPredicted RBP36.53■■■■□ 3.44
CHKB-212ENST00000492582 ZBTB7BO15156 539 aaPredicted RBP36.52■■■■□ 3.44
CHKB-212ENST00000492582 HOXC9P31274 260 aa36.52■■■■□ 3.44
CHKB-212ENST00000492582 CHMP4BQ9H444 224 aaKnown RBP36.52■■■■□ 3.44
CHKB-212ENST00000492582 KIAA0232Q92628 1395 aa36.52■■■■□ 3.44
CHKB-212ENST00000492582 RBM33Q96EV2 1170 aaKnown RBP36.51■■■■□ 3.44
CHKB-212ENST00000492582 API5Q9BZZ5 524 aaKnown RBP36.5■■■■□ 3.43
CHKB-212ENST00000492582 FOXO3O43524 673 aa36.49■■■■□ 3.43
CHKB-212ENST00000492582 HAP1P54257 671 aaPredicted RBP36.49■■■■□ 3.43
CHKB-212ENST00000492582 USP19O94966 1318 aa36.48■■■■□ 3.43
CHKB-212ENST00000492582 NWD1Q149M9 1564 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms