RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-210	ENST00000490546	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	ADAMTS2	O95450	1211 aa		13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	CHRNA2	Q15822	529 aa		13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	HSP90AB2P	Q58FF8	381 aa		13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	FAM9B	Q8IZU0	186 aa		13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	LTV1	Q96GA3	475 aa	Predicted RBP	13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	INSR	P06213	1382 aa		13.81	□□□□□ -0.2
PUM1-210	ENST00000490546	U2SURP	O15042	1029 aa	Known RBP	13.8	□□□□□ -0.2
PUM1-210	ENST00000490546	MEX3C	Q5U5Q3	659 aa	Known RBP	13.8	□□□□□ -0.2
PUM1-210	ENST00000490546	CRYBG1	Q9Y4K1	1723 aa		13.8	□□□□□ -0.2
PUM1-210	ENST00000490546	ABCA3	Q99758	1704 aa		13.79	□□□□□ -0.2
PUM1-210	ENST00000490546	FAM83G	A6ND36	823 aa		13.79	□□□□□ -0.2
PUM1-210	ENST00000490546	CSB-PGBD3	P0DP91	1061 aa		13.79	□□□□□ -0.2
PUM1-210	ENST00000490546	EVA1C	P58658	441 aa		13.79	□□□□□ -0.2
PUM1-210	ENST00000490546	PNISR	Q8TF01	805 aa	Known RBP	13.79	□□□□□ -0.2
PUM1-210	ENST00000490546	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.78	□□□□□ -0.2
PUM1-210	ENST00000490546	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	2e-8	■□□□□ 9.2
PUM1-210	ENST00000490546	EIF4A2	Q14240	407 aa	Known RBP	13.78	□□□□□ -0.2
PUM1-210	ENST00000490546	PNN	Q9H307	717 aa	Known RBP	13.78	□□□□□ -0.2
PUM1-210	ENST00000490546	BLM	P54132	1417 aa	Predicted RBP	13.78	□□□□□ -0.2
PUM1-210	ENST00000490546	IL13	P35225	146 aa		13.77	□□□□□ -0.21
PUM1-210	ENST00000490546	ANKRD24	Q8TF21	1146 aa		13.77	□□□□□ -0.21
PUM1-210	ENST00000490546	PEAK1	Q9H792	1746 aa		13.77	□□□□□ -0.21
PUM1-210	ENST00000490546	ABCC6	O95255	1503 aa		13.76	□□□□□ -0.21
PUM1-210	ENST00000490546	NEFM	P07197	916 aa		13.76	□□□□□ -0.21
PUM1-210	ENST00000490546	NGLY1	Q96IV0	654 aa		13.76	□□□□□ -0.21
PUM1-210	ENST00000490546	AXIN2	Q9Y2T1	843 aa		13.76	□□□□□ -0.21
PUM1-210	ENST00000490546	RGPD5	Q99666	1765 aa		13.76	□□□□□ -0.21
PUM1-210	ENST00000490546	NLRP2	Q9NX02	1062 aa		13.75	□□□□□ -0.21
PUM1-210	ENST00000490546	BTG4	Q9NY30	223 aa		13.75	□□□□□ -0.21
PUM1-210	ENST00000490546	ADAMTS8	Q9UP79	889 aa		13.75	□□□□□ -0.21
PUM1-210	ENST00000490546	COL14A1	Q05707	1796 aa	Known RBP	13.75	□□□□□ -0.21
PUM1-210	ENST00000490546	C8orf37	Q96NL8	207 aa		13.74	□□□□□ -0.21
PUM1-210	ENST00000490546	STRN4	Q9NRL3	753 aa		13.74	□□□□□ -0.21
PUM1-210	ENST00000490546	COL3A1	P02461	1466 aa	Predicted RBP	13.74	□□□□□ -0.21
PUM1-210	ENST00000490546	COL18A1	P39060	1754 aa		13.73	□□□□□ -0.21
PUM1-210	ENST00000490546	TOM1L2	Q6ZVM7	507 aa		13.73	□□□□□ -0.21
PUM1-210	ENST00000490546	EYA1	Q99502	592 aa		13.73	□□□□□ -0.21
PUM1-210	ENST00000490546	ERBB3	P21860	1342 aa		13.72	□□□□□ -0.21
PUM1-210	ENST00000490546	FCHSD2	O94868	740 aa		13.72	□□□□□ -0.21
PUM1-210	ENST00000490546	HMOX1	P09601	288 aa		13.72	□□□□□ -0.21
PUM1-210	ENST00000490546	SULT6B1	Q6IMI4	303 aa		13.72	□□□□□ -0.21
PUM1-210	ENST00000490546	WDR17	Q8IZU2	1322 aa		13.71	□□□□□ -0.21
PUM1-210	ENST00000490546	NBPF6	Q5VWK0	638 aa		13.71	□□□□□ -0.21
PUM1-210	ENST00000490546	NBPF4	Q96M43	638 aa		13.71	□□□□□ -0.21
PUM1-210	ENST00000490546	CAMTA1	Q9Y6Y1	1673 aa		13.71	□□□□□ -0.21
PUM1-210	ENST00000490546	MAPK8IP3	Q9UPT6	1336 aa		13.7	□□□□□ -0.22
PUM1-210	ENST00000490546	IGSF1	Q8N6C5	1336 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	LARP1	Q6PKG0	1096 aa	Known RBP	13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	UNC5CL	Q8IV45	518 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	CCDC146	Q8IYE0	955 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	USHBP1	Q8N6Y0	703 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	RUNDC1	Q96C34	613 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	CCDC9	Q9Y3X0	531 aa	Known RBP	13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	LMO7	Q8WWI1	1683 aa		13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	FAM208A	Q9UK61	1670 aa	Known RBP	13.69	□□□□□ -0.22
PUM1-210	ENST00000490546	COL5A2	P05997	1499 aa	Predicted RBP	13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	PRKAR2B	P31323	418 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	RAPGEF4	Q8WZA2	1011 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	CARD10	Q9BWT7	1032 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	USP21	Q9UK80	565 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	PLCH1	Q4KWH8	1693 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	LRP6	O75581	1613 aa		13.68	□□□□□ -0.22
PUM1-210	ENST00000490546	NWD2	Q9ULI1	1742 aa		13.67	□□□□□ -0.22
PUM1-210	ENST00000490546	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.67	□□□□□ -0.22
PUM1-210	ENST00000490546	RSPH6A	Q9H0K4	717 aa		13.67	□□□□□ -0.22
PUM1-210	ENST00000490546	RGPD2	P0DJD1	1756 aa		13.67	□□□□□ -0.22
PUM1-210	ENST00000490546	AFF2	P51816	1311 aa		13.66	□□□□□ -0.22
PUM1-210	ENST00000490546	TAT	P17735	454 aa	Predicted RBP	13.66	□□□□□ -0.22
PUM1-210	ENST00000490546	AEBP1	Q8IUX7	1158 aa		13.66	□□□□□ -0.22
PUM1-210	ENST00000490546	YTHDC1	Q96MU7	727 aa	Known RBP	13.66	□□□□□ -0.22
PUM1-210	ENST00000490546	USP35	Q9P2H5	1018 aa		13.66	□□□□□ -0.22
PUM1-210	ENST00000490546	CRB1	P82279	1406 aa		13.65	□□□□□ -0.22
PUM1-210	ENST00000490546	SLIT2	O94813	1529 aa		13.65	□□□□□ -0.22
PUM1-210	ENST00000490546	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PUM1-210	ENST00000490546	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.65	□□□□□ -0.22
PUM1-210	ENST00000490546	RGPD1	P0DJD0	1748 aa		13.64	□□□□□ -0.23
PUM1-210	ENST00000490546	KDR	P35968	1356 aa		13.64	□□□□□ -0.23
PUM1-210	ENST00000490546	VPS72	Q15906	364 aa		13.64	□□□□□ -0.23
PUM1-210	ENST00000490546	TCP11L2	Q8N4U5	519 aa		13.64	□□□□□ -0.23
PUM1-210	ENST00000490546	NGEF	Q8N5V2	710 aa		13.64	□□□□□ -0.23
PUM1-210	ENST00000490546	APAF1	O14727	1248 aa		13.63	□□□□□ -0.23
PUM1-210	ENST00000490546	IL2RB	P14784	551 aa		13.63	□□□□□ -0.23
PUM1-210	ENST00000490546	AMOT	Q4VCS5	1084 aa		13.63	□□□□□ -0.23
PUM1-210	ENST00000490546	PLEKHF1	Q96S99	279 aa		13.63	□□□□□ -0.23
PUM1-210	ENST00000490546	THRAP3	Q9Y2W1	955 aa	Known RBP	13.63	□□□□□ -0.23
PUM1-210	ENST00000490546	NEUROD2	Q15784	382 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	ZNF772	Q68DY9	489 aa	Predicted RBP	13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	GAS2L2	Q8NHY3	880 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	SPG7	Q9UQ90	795 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	SPATA31A1	Q5TZJ5	1347 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	SPATA31A5	Q5VU36	1347 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	SPATA31A7	Q8IWB4	1347 aa		13.62	□□□□□ -0.23
PUM1-210	ENST00000490546	BCL9L	Q86UU0	1499 aa		13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	NFE2L2	Q16236	605 aa		13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	ILDR1	Q86SU0	546 aa	Predicted RBP	13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	PHACTR3	Q96KR7	559 aa		13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	QTRT2	Q9H974	415 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 323.7 ms