RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 COG3Q96JB2 828 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 TRPC5Q9UL62 973 aaPredicted RBP10.85□□□□□ -0.67
SSR1-210ENST00000489567 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
SSR1-210ENST00000489567 KIF20BQ96Q89 1820 aa10.84□□□□□ -0.67
SSR1-210ENST00000489567 COL18A1P39060 1754 aa10.83□□□□□ -0.68
SSR1-210ENST00000489567 AATKQ6ZMQ8 1374 aa10.83□□□□□ -0.68
SSR1-210ENST00000489567 RXRBP28702 533 aa10.83□□□□□ -0.68
SSR1-210ENST00000489567 VPS72Q15906 364 aa10.83□□□□□ -0.68
SSR1-210ENST00000489567 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
SSR1-210ENST00000489567 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
SSR1-210ENST00000489567 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
SSR1-210ENST00000489567 GLI3P10071 1580 aa10.82□□□□□ -0.68
SSR1-210ENST00000489567 PER1O15534 1290 aaPredicted RBP10.82□□□□□ -0.68
SSR1-210ENST00000489567 RBM6P78332 1123 aaKnown RBP10.82□□□□□ -0.68
SSR1-210ENST00000489567 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
SSR1-210ENST00000489567 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
SSR1-210ENST00000489567 RGS12O14924 1447 aa10.81□□□□□ -0.68
SSR1-210ENST00000489567 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
SSR1-210ENST00000489567 CCDC9Q9Y3X0 531 aaKnown RBP10.81□□□□□ -0.68
SSR1-210ENST00000489567 LTN1O94822 1766 aa10.8□□□□□ -0.68
SSR1-210ENST00000489567 MAP3K19Q56UN5 1328 aa10.8□□□□□ -0.68
SSR1-210ENST00000489567 RGPD5Q99666 1765 aa10.8□□□□□ -0.68
SSR1-210ENST00000489567 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
SSR1-210ENST00000489567 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
SSR1-210ENST00000489567 EVA1CP58658 441 aa10.79□□□□□ -0.68
SSR1-210ENST00000489567 KNSTRNQ9Y448 316 aa10.79□□□□□ -0.68
SSR1-210ENST00000489567 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
SSR1-210ENST00000489567 SPATA31A1Q5TZJ5 1347 aa10.78□□□□□ -0.68
SSR1-210ENST00000489567 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
SSR1-210ENST00000489567 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
SSR1-210ENST00000489567 ABCC6O95255 1503 aa10.77□□□□□ -0.68
SSR1-210ENST00000489567 HOXC9P31274 260 aa10.77□□□□□ -0.69
SSR1-210ENST00000489567 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.69
SSR1-210ENST00000489567 IP6K1Q92551 441 aa10.77□□□□□ -0.69
SSR1-210ENST00000489567 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
SSR1-210ENST00000489567 PEAK1Q9H792 1746 aa10.77□□□□□ -0.69
SSR1-210ENST00000489567 ANKRD26Q9UPS8 1709 aa10.77□□□□□ -0.69
SSR1-210ENST00000489567 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
SSR1-210ENST00000489567 ERBB3P21860 1342 aa10.76□□□□□ -0.69
SSR1-210ENST00000489567 WDR17Q8IZU2 1322 aa10.76□□□□□ -0.69
SSR1-210ENST00000489567 NSD2O96028 1365 aa10.76□□□□□ -0.69
SSR1-210ENST00000489567 AMPHP49418 695 aa10.76□□□□□ -0.69
SSR1-210ENST00000489567 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
SSR1-210ENST00000489567 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
SSR1-210ENST00000489567 CRB1P82279 1406 aa10.76□□□□□ -0.69
SSR1-210ENST00000489567 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
SSR1-210ENST00000489567 HSP90AB2PQ58FF8 381 aa10.75□□□□□ -0.69
SSR1-210ENST00000489567 TOM1L2Q6ZVM7 507 aa10.75□□□□□ -0.69
SSR1-210ENST00000489567 SEPT12Q8IYM1 358 aa10.75□□□□□ -0.69
SSR1-210ENST00000489567 ANKRD24Q8TF21 1146 aa10.75□□□□□ -0.69
SSR1-210ENST00000489567 LTV1Q96GA3 475 aaPredicted RBP10.75□□□□□ -0.69
SSR1-210ENST00000489567 POLKQ9UBT6 870 aa10.75□□□□□ -0.69
SSR1-210ENST00000489567 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
SSR1-210ENST00000489567 MORC1Q86VD1 984 aa10.74□□□□□ -0.69
SSR1-210ENST00000489567 TCP11L2Q8N4U5 519 aa10.74□□□□□ -0.69
SSR1-210ENST00000489567 RTL1A6NKG5 1358 aa10.74□□□□□ -0.69
SSR1-210ENST00000489567 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
SSR1-210ENST00000489567 THSD7AQ9UPZ6 1657 aa10.74□□□□□ -0.69
SSR1-210ENST00000489567 FLT4P35916 1363 aa10.73□□□□□ -0.69
SSR1-210ENST00000489567 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
SSR1-210ENST00000489567 CARD10Q9BWT7 1032 aa10.73□□□□□ -0.69
SSR1-210ENST00000489567 MAP2P11137 1827 aaKnown RBP10.73□□□□□ -0.69
SSR1-210ENST00000489567 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
SSR1-210ENST00000489567 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
SSR1-210ENST00000489567 A0A0G2JS52 829 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
SSR1-210ENST00000489567 NLRP2Q9NX02 1062 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 INSRP06213 1382 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 EP400Q96L91 3159 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 SOCS7O14512 581 aa10.72□□□□□ -0.69
SSR1-210ENST00000489567 THRAP3Q9Y2W1 955 aaKnown RBP10.71□□□□□ -0.69
SSR1-210ENST00000489567 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.7
SSR1-210ENST00000489567 RGPD2P0DJD1 1756 aa10.71□□□□□ -0.7
SSR1-210ENST00000489567 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
SSR1-210ENST00000489567 FAM182BQ5T319 152 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 NBPF6Q5VWK0 638 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 NBPF4Q96M43 638 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 DISP2A7MBM2 1401 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 KRT27Q7Z3Y8 459 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
SSR1-210ENST00000489567 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
SSR1-210ENST00000489567 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
SSR1-210ENST00000489567 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
SSR1-210ENST00000489567 MTHFSP49914 203 aa10.68□□□□□ -0.7
SSR1-210ENST00000489567 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
SSR1-210ENST00000489567 PARP4Q9UKK3 1724 aaKnown RBP10.68□□□□□ -0.7
SSR1-210ENST00000489567 LRRC37A3O60309 1634 aa10.68□□□□□ -0.7
SSR1-210ENST00000489567 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
SSR1-210ENST00000489567 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.78e-16■■■■■ 32.6
SSR1-210ENST00000489567 IL2RBP14784 551 aa10.66□□□□□ -0.7
SSR1-210ENST00000489567 DDB1Q16531 1140 aa10.66□□□□□ -0.7
SSR1-210ENST00000489567 EYA1Q99502 592 aa10.66□□□□□ -0.7
SSR1-210ENST00000489567 MEGF6O75095 1541 aa10.66□□□□□ -0.7
SSR1-210ENST00000489567 CDCA7Q9BWT1 371 aaPredicted RBP10.66□□□□□ -0.7
SSR1-210ENST00000489567 NCAPD2Q15021 1401 aa10.65□□□□□ -0.7
SSR1-210ENST00000489567 PDE3BQ13370 1112 aa10.65□□□□□ -0.7
SSR1-210ENST00000489567 MARCH10Q8NA82 808 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms