RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 KIF24Q5T7B8 1368 aa9.16□□□□□ -0.94
PDAP1-203ENST00000488214 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
PDAP1-203ENST00000488214 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
PDAP1-203ENST00000488214 ABCC6O95255 1503 aa9.15□□□□□ -0.94
PDAP1-203ENST00000488214 COL18A1P39060 1754 aa9.15□□□□□ -0.94
PDAP1-203ENST00000488214 EIF4A2Q14240 407 aaKnown RBP9.15□□□□□ -0.94
PDAP1-203ENST00000488214 KCNH5Q8NCM2 988 aa9.15□□□□□ -0.94
PDAP1-203ENST00000488214 RUNDC1Q96C34 613 aa9.15□□□□□ -0.94
PDAP1-203ENST00000488214 VIRMAQ69YN4 1812 aaKnown RBP9.15□□□□□ -0.95
PDAP1-203ENST00000488214 SPATA31A3Q5VYP0 1347 aa9.14□□□□□ -0.95
PDAP1-203ENST00000488214 APAF1O14727 1248 aa9.14□□□□□ -0.95
PDAP1-203ENST00000488214 ADRA2BP18089 450 aa9.14□□□□□ -0.95
PDAP1-203ENST00000488214 IL13P35225 146 aa9.14□□□□□ -0.95
PDAP1-203ENST00000488214 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
PDAP1-203ENST00000488214 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
PDAP1-203ENST00000488214 SOS2Q07890 1332 aaPredicted RBP9.13□□□□□ -0.95
PDAP1-203ENST00000488214 HMOX1P09601 288 aa9.13□□□□□ -0.95
PDAP1-203ENST00000488214 HOXC9P31274 260 aa9.13□□□□□ -0.95
PDAP1-203ENST00000488214 PRKAR2BP31323 418 aa9.13□□□□□ -0.95
PDAP1-203ENST00000488214 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
PDAP1-203ENST00000488214 GCP02774 474 aa9.12□□□□□ -0.95
PDAP1-203ENST00000488214 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
PDAP1-203ENST00000488214 PLCH1Q4KWH8 1693 aa9.12□□□□□ -0.95
PDAP1-203ENST00000488214 NEFMP07197 916 aa9.11□□□□□ -0.95
PDAP1-203ENST00000488214 NEUROD2Q15784 382 aa9.11□□□□□ -0.95
PDAP1-203ENST00000488214 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
PDAP1-203ENST00000488214 TCP11L2Q8N4U5 519 aa9.11□□□□□ -0.95
PDAP1-203ENST00000488214 LTV1Q96GA3 475 aaPredicted RBP9.11□□□□□ -0.95
PDAP1-203ENST00000488214 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
PDAP1-203ENST00000488214 LRRC37A3O60309 1634 aa9.11□□□□□ -0.95
PDAP1-203ENST00000488214 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
PDAP1-203ENST00000488214 WNK3Q9BYP7 1800 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 IGSF1Q8N6C5 1336 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 ZNF521Q96K83 1311 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 COL14A1Q05707 1796 aaKnown RBP9.1□□□□□ -0.95
PDAP1-203ENST00000488214 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
PDAP1-203ENST00000488214 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 CABLES1Q8TDN4 633 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 PLEKHF1Q96S99 279 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 KDRP35968 1356 aa9.1□□□□□ -0.95
PDAP1-203ENST00000488214 FCHSD2O94868 740 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
PDAP1-203ENST00000488214 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 ARHGEF25Q86VW2 580 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 IP6K1Q92551 441 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 CDCA7LQ96GN5 454 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 KIAA0232Q92628 1395 aa9.09□□□□□ -0.95
PDAP1-203ENST00000488214 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 PIP4K2BP78356 416 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 CPDO75976 1380 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
PDAP1-203ENST00000488214 UBAP1LF5GYI3 381 aa9.07□□□□□ -0.96
PDAP1-203ENST00000488214 TMPOP42166 694 aaKnown RBP9.07□□□□□ -0.96
PDAP1-203ENST00000488214 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
PDAP1-203ENST00000488214 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
PDAP1-203ENST00000488214 EYA1Q99502 592 aa9.07□□□□□ -0.96
PDAP1-203ENST00000488214 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
PDAP1-203ENST00000488214 ERBB3P21860 1342 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 NCAPD2Q15021 1401 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 TOM1O60784 492 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 RIPK4P57078 832 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 CHRNA2Q15822 529 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 CCDC27Q2M243 656 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 ANKRD24Q8TF21 1146 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 PHACTR3Q96KR7 559 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 PRDM11Q9NQV5 511 aa9.06□□□□□ -0.96
PDAP1-203ENST00000488214 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
PDAP1-203ENST00000488214 E9PSI1 815 aa9.05□□□□□ -0.96
PDAP1-203ENST00000488214 NEFLP07196 543 aa9.05□□□□□ -0.96
PDAP1-203ENST00000488214 LRRC59Q96AG4 307 aaKnown RBP9.05□□□□□ -0.96
PDAP1-203ENST00000488214 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
PDAP1-203ENST00000488214 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
PDAP1-203ENST00000488214 CSB-PGBD3P0DP91 1061 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 SLFN5Q08AF3 891 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 LMOD3Q0VAK6 560 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 NCBP3Q53F19 620 aaKnown RBP9.04□□□□□ -0.96
PDAP1-203ENST00000488214 TRIM35Q9UPQ4 493 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 MEGF6O75095 1541 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
PDAP1-203ENST00000488214 NBPF6Q5VWK0 638 aa9.03□□□□□ -0.96
PDAP1-203ENST00000488214 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
PDAP1-203ENST00000488214 NBPF4Q96M43 638 aa9.03□□□□□ -0.96
PDAP1-203ENST00000488214 SPINK5Q9NQ38 1064 aaPredicted RBP9.03□□□□□ -0.96
PDAP1-203ENST00000488214 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
PDAP1-203ENST00000488214 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
PDAP1-203ENST00000488214 KDM3BQ7LBC6 1761 aa9.03□□□□□ -0.96
PDAP1-203ENST00000488214 FANCIQ9NVI1 1328 aa9.03□□□□□ -0.96
PDAP1-203ENST00000488214 MAP3K5Q99683 1374 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 WDR63Q8IWG1 891 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 CERKQ8TCT0 537 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 THUMPD2Q9BTF0 503 aaKnown RBP9.02□□□□□ -0.97
PDAP1-203ENST00000488214 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 RCAN3Q9UKA8 241 aa9.02□□□□□ -0.97
PDAP1-203ENST00000488214 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms