RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
RTCB-205ENST00000487704 LMO7Q8WWI1 1683 aa11.72□□□□□ -0.53
RTCB-205ENST00000487704 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
RTCB-205ENST00000487704 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.53
RTCB-205ENST00000487704 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.53
RTCB-205ENST00000487704 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
RTCB-205ENST00000487704 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
RTCB-205ENST00000487704 LRRC37A3O60309 1634 aa11.71□□□□□ -0.54
RTCB-205ENST00000487704 PAPPAQ13219 1627 aa11.71□□□□□ -0.54
RTCB-205ENST00000487704 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
RTCB-205ENST00000487704 PIK3C2GO75747 1445 aa11.7□□□□□ -0.54
RTCB-205ENST00000487704 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTCB-205ENST00000487704 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
RTCB-205ENST00000487704 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
RTCB-205ENST00000487704 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
RTCB-205ENST00000487704 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
RTCB-205ENST00000487704 POGKQ9P215 609 aa11.67□□□□□ -0.54
RTCB-205ENST00000487704 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
RTCB-205ENST00000487704 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 USP19O94966 1318 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 WASLO00401 505 aaPredicted RBP11.66□□□□□ -0.54
RTCB-205ENST00000487704 GCP02774 474 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
RTCB-205ENST00000487704 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
RTCB-205ENST00000487704 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
RTCB-205ENST00000487704 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
RTCB-205ENST00000487704 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
RTCB-205ENST00000487704 SPATA31E1Q6ZUB1 1445 aa11.64□□□□□ -0.55
RTCB-205ENST00000487704 EXOC5O00471 708 aa11.64□□□□□ -0.55
RTCB-205ENST00000487704 HTRA3P83110 453 aa11.64□□□□□ -0.55
RTCB-205ENST00000487704 TOM1L2Q6ZVM7 507 aa11.64□□□□□ -0.55
RTCB-205ENST00000487704 HIRIP3Q9BW71 556 aaPredicted RBP11.64□□□□□ -0.55
RTCB-205ENST00000487704 ARHGEF28Q8N1W1 1705 aaKnown RBP11.63□□□□□ -0.55
RTCB-205ENST00000487704 FSTL1Q12841 308 aa11.63□□□□□ -0.55
RTCB-205ENST00000487704 SLC27A3Q5K4L6 730 aa11.63□□□□□ -0.55
RTCB-205ENST00000487704 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
RTCB-205ENST00000487704 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
RTCB-205ENST00000487704 CFAP70Q5T0N1 1121 aa11.62□□□□□ -0.55
RTCB-205ENST00000487704 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
RTCB-205ENST00000487704 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
RTCB-205ENST00000487704 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
RTCB-205ENST00000487704 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
RTCB-205ENST00000487704 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
RTCB-205ENST00000487704 POLR3AO14802 1390 aaPredicted RBP11.61□□□□□ -0.55
RTCB-205ENST00000487704 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
RTCB-205ENST00000487704 NHSQ6T4R5 1651 aa11.6□□□□□ -0.55
RTCB-205ENST00000487704 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
RTCB-205ENST00000487704 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
RTCB-205ENST00000487704 USP6P35125 1406 aa11.6□□□□□ -0.55
RTCB-205ENST00000487704 ITGAEP38570 1179 aa11.58□□□□□ -0.56
RTCB-205ENST00000487704 ACSBG1Q96GR2 724 aa11.58□□□□□ -0.56
RTCB-205ENST00000487704 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
RTCB-205ENST00000487704 NMRK2Q9NPI5 230 aa11.58□□□□□ -0.56
RTCB-205ENST00000487704 ACEP12821 1306 aa11.58□□□□□ -0.56
RTCB-205ENST00000487704 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
RTCB-205ENST00000487704 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
RTCB-205ENST00000487704 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
RTCB-205ENST00000487704 TNS2Q63HR2 1409 aa11.55□□□□□ -0.56
RTCB-205ENST00000487704 COL23A1Q86Y22 540 aaPredicted RBP11.55□□□□□ -0.56
RTCB-205ENST00000487704 C16orf71Q8IYS4 520 aaPredicted RBP11.55□□□□□ -0.56
RTCB-205ENST00000487704 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
RTCB-205ENST00000487704 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
RTCB-205ENST00000487704 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
RTCB-205ENST00000487704 BTAF1O14981 1849 aa11.54□□□□□ -0.56
RTCB-205ENST00000487704 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
RTCB-205ENST00000487704 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
RTCB-205ENST00000487704 LOC105371045A0A1W2PR82 267 aa11.53□□□□□ -0.56
RTCB-205ENST00000487704 COL18A1P39060 1754 aa11.53□□□□□ -0.56
RTCB-205ENST00000487704 CCDC7Q96M83 1385 aa11.53□□□□□ -0.56
RTCB-205ENST00000487704 TUBGCP6Q96RT7 1819 aa11.52□□□□□ -0.57
RTCB-205ENST00000487704 ZBTB7CA1YPR0 619 aa11.52□□□□□ -0.57
RTCB-205ENST00000487704 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
RTCB-205ENST00000487704 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
RTCB-205ENST00000487704 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
RTCB-205ENST00000487704 MSH5O43196 834 aa11.51□□□□□ -0.57
RTCB-205ENST00000487704 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
RTCB-205ENST00000487704 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
RTCB-205ENST00000487704 ABCC6O95255 1503 aa11.5□□□□□ -0.57
RTCB-205ENST00000487704 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
RTCB-205ENST00000487704 KCNQ4P56696 695 aa11.5□□□□□ -0.57
RTCB-205ENST00000487704 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
RTCB-205ENST00000487704 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
RTCB-205ENST00000487704 RGS19P49795 217 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 NLRP6P59044 892 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 CDK19Q9BWU1 502 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 SLIT3O75094 1523 aa11.49□□□□□ -0.57
RTCB-205ENST00000487704 MLLT1Q03111 559 aaPredicted RBP11.48□□□□□ -0.57
RTCB-205ENST00000487704 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
RTCB-205ENST00000487704 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
RTCB-205ENST00000487704 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.57
RTCB-205ENST00000487704 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
RTCB-205ENST00000487704 KAT6BQ8WYB5 2073 aa11.46□□□□□ -0.57
RTCB-205ENST00000487704 IL2RBP14784 551 aa11.45□□□□□ -0.58
RTCB-205ENST00000487704 CCNL1Q9UK58 526 aaPredicted RBP11.45□□□□□ -0.58
RTCB-205ENST00000487704 PLEKHG2Q9H7P9 1386 aa11.44□□□□□ -0.58
RTCB-205ENST00000487704 KCNH5Q8NCM2 988 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms