RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 COL3A1P02461 1466 aaPredicted RBP22.62■■□□□ 1.21
NF1-211ENST00000487476 CDK12Q9NYV4 1490 aaPredicted RBP22.62■■□□□ 1.21
NF1-211ENST00000487476 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
NF1-211ENST00000487476 INSRP06213 1382 aa22.62■■□□□ 1.21
NF1-211ENST00000487476 PRDM11Q9NQV5 511 aa22.61■■□□□ 1.21
NF1-211ENST00000487476 CPDO75976 1380 aa22.61■■□□□ 1.21
NF1-211ENST00000487476 LTN1O94822 1766 aa22.61■■□□□ 1.21
NF1-211ENST00000487476 ADAMTS2O95450 1211 aa22.61■■□□□ 1.21
NF1-211ENST00000487476 FAM83GA6ND36 823 aa22.6■■□□□ 1.21
NF1-211ENST00000487476 EIF4A2Q14240 407 aaKnown RBP22.6■■□□□ 1.21
NF1-211ENST00000487476 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
NF1-211ENST00000487476 DIAPH1O60610 1272 aaKnown RBP22.6■■□□□ 1.21
NF1-211ENST00000487476 FBXO41Q8TF61 875 aa22.6■■□□□ 1.21
NF1-211ENST00000487476 IL13P35225 146 aa22.59■■□□□ 1.21
NF1-211ENST00000487476 RTL1A6NKG5 1358 aa22.58■■□□□ 1.21
NF1-211ENST00000487476 SHPRHQ149N8 1683 aa22.58■■□□□ 1.2
NF1-211ENST00000487476 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
NF1-211ENST00000487476 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
NF1-211ENST00000487476 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
NF1-211ENST00000487476 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
NF1-211ENST00000487476 COL18A1P39060 1754 aa22.54■■□□□ 1.2
NF1-211ENST00000487476 ANKRD24Q8TF21 1146 aa22.54■■□□□ 1.2
NF1-211ENST00000487476 U2AF1L5P0DN76 240 aaPredicted RBP22.53■■□□□ 1.2
NF1-211ENST00000487476 U2AF1Q01081 240 aaKnown RBP eCLIP22.53■■□□□ 1.2
NF1-211ENST00000487476 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
NF1-211ENST00000487476 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
NF1-211ENST00000487476 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
NF1-211ENST00000487476 LRP6O75581 1613 aa22.51■■□□□ 1.19
NF1-211ENST00000487476 BLMP54132 1417 aaPredicted RBP22.51■■□□□ 1.19
NF1-211ENST00000487476 SENP3-EIF4A1A0A087X0R7 540 aa22.51■■□□□ 1.19
NF1-211ENST00000487476 EYA1Q99502 592 aa22.51■■□□□ 1.19
NF1-211ENST00000487476 HMOX1P09601 288 aa22.5■■□□□ 1.19
NF1-211ENST00000487476 BTG4Q9NY30 223 aa22.5■■□□□ 1.19
NF1-211ENST00000487476 RGPD5Q99666 1765 aa22.5■■□□□ 1.19
NF1-211ENST00000487476 ERBB3P21860 1342 aa22.5■■□□□ 1.19
NF1-211ENST00000487476 NBPF6Q5VWK0 638 aa22.49■■□□□ 1.19
NF1-211ENST00000487476 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
NF1-211ENST00000487476 NBPF4Q96M43 638 aa22.49■■□□□ 1.19
NF1-211ENST00000487476 AEBP1Q8IUX7 1158 aa22.48■■□□□ 1.19
NF1-211ENST00000487476 CCDC146Q8IYE0 955 aa22.48■■□□□ 1.19
NF1-211ENST00000487476 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
NF1-211ENST00000487476 LMO7Q8WWI1 1683 aa22.48■■□□□ 1.19
NF1-211ENST00000487476 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
NF1-211ENST00000487476 CSB-PGBD3P0DP91 1061 aa22.46■■□□□ 1.19
NF1-211ENST00000487476 SULT6B1Q6IMI4 303 aa22.46■■□□□ 1.19
NF1-211ENST00000487476 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
NF1-211ENST00000487476 COL5A2P05997 1499 aaPredicted RBP22.45■■□□□ 1.18
NF1-211ENST00000487476 ABCC6O95255 1503 aa22.45■■□□□ 1.18
NF1-211ENST00000487476 EVA1CP58658 441 aa22.45■■□□□ 1.18
NF1-211ENST00000487476 LARP1Q6PKG0 1096 aaKnown RBP22.45■■□□□ 1.18
NF1-211ENST00000487476 NLRP2Q9NX02 1062 aa22.45■■□□□ 1.18
NF1-211ENST00000487476 NGLY1Q96IV0 654 aa22.44■■□□□ 1.18
NF1-211ENST00000487476 COL14A1Q05707 1796 aaKnown RBP22.44■■□□□ 1.18
NF1-211ENST00000487476 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
NF1-211ENST00000487476 MEX3CQ5U5Q3 659 aaKnown RBP22.42■■□□□ 1.18
NF1-211ENST00000487476 RGPD1P0DJD0 1748 aa22.42■■□□□ 1.18
NF1-211ENST00000487476 WDR17Q8IZU2 1322 aa22.42■■□□□ 1.18
NF1-211ENST00000487476 PRKAR2BP31323 418 aa22.41■■□□□ 1.18
NF1-211ENST00000487476 PLEKHF1Q96S99 279 aa22.41■■□□□ 1.18
NF1-211ENST00000487476 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
NF1-211ENST00000487476 FCHSD2O94868 740 aa22.41■■□□□ 1.18
NF1-211ENST00000487476 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
NF1-211ENST00000487476 SLIT2O94813 1529 aa22.39■■□□□ 1.18
NF1-211ENST00000487476 PHACTR3Q96KR7 559 aa22.39■■□□□ 1.17
NF1-211ENST00000487476 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
NF1-211ENST00000487476 FNBP4Q8N3X1 1017 aaPredicted RBP22.38■■□□□ 1.17
NF1-211ENST00000487476 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
NF1-211ENST00000487476 KDRP35968 1356 aa22.38■■□□□ 1.17
NF1-211ENST00000487476 RUNDC1Q96C34 613 aa22.37■■□□□ 1.17
NF1-211ENST00000487476 BCL9LQ86UU0 1499 aa22.36■■□□□ 1.17
NF1-211ENST00000487476 APAF1O14727 1248 aa22.36■■□□□ 1.17
NF1-211ENST00000487476 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
NF1-211ENST00000487476 UNC5CLQ8IV45 518 aa22.35■■□□□ 1.17
NF1-211ENST00000487476 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
NF1-211ENST00000487476 CARD10Q9BWT7 1032 aa22.34■■□□□ 1.17
NF1-211ENST00000487476 NCAPD2Q15021 1401 aa22.34■■□□□ 1.17
NF1-211ENST00000487476 TCP11L2Q8N4U5 519 aa22.34■■□□□ 1.17
NF1-211ENST00000487476 USP21Q9UK80 565 aa22.34■■□□□ 1.17
NF1-211ENST00000487476 RRP7AQ9Y3A4 280 aaKnown RBP22.34■■□□□ 1.17
NF1-211ENST00000487476 AFF2P51816 1311 aa22.34■■□□□ 1.17
NF1-211ENST00000487476 CRB1P82279 1406 aa22.33■■□□□ 1.17
NF1-211ENST00000487476 NRAPQ86VF7 1730 aa22.32■■□□□ 1.16
NF1-211ENST00000487476 NEUROD2Q15784 382 aa22.32■■□□□ 1.16
NF1-211ENST00000487476 PNNQ9H307 717 aaKnown RBP22.32■■□□□ 1.16
NF1-211ENST00000487476 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
NF1-211ENST00000487476 FAM208AQ9UK61 1670 aaKnown RBP22.31■■□□□ 1.16
NF1-211ENST00000487476 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
NF1-211ENST00000487476 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
NF1-211ENST00000487476 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
NF1-211ENST00000487476 MEGF6O75095 1541 aa22.28■■□□□ 1.16
NF1-211ENST00000487476 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
NF1-211ENST00000487476 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
NF1-211ENST00000487476 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
NF1-211ENST00000487476 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
NF1-211ENST00000487476 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
NF1-211ENST00000487476 TMPOP42166 694 aaKnown RBP22.28■■□□□ 1.16
NF1-211ENST00000487476 VPS72Q15906 364 aa22.27■■□□□ 1.16
NF1-211ENST00000487476 NEFMP07197 916 aa22.27■■□□□ 1.16
NF1-211ENST00000487476 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
NF1-211ENST00000487476 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms