RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
RN7SL397P-201ENST00000487309 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
RN7SL397P-201ENST00000487309 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
RN7SL397P-201ENST00000487309 APBA3O96018 575 aa13.64□□□□□ -0.23
RN7SL397P-201ENST00000487309 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
RN7SL397P-201ENST00000487309 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
RN7SL397P-201ENST00000487309 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
RN7SL397P-201ENST00000487309 PTF1AQ7RTS3 328 aa13.62□□□□□ -0.23
RN7SL397P-201ENST00000487309 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
RN7SL397P-201ENST00000487309 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
RN7SL397P-201ENST00000487309 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 NME9Q86XW9 330 aa13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
RN7SL397P-201ENST00000487309 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
RN7SL397P-201ENST00000487309 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
RN7SL397P-201ENST00000487309 OVOS2A0A0J9YW53 1432 aa13.59□□□□□ -0.23
RN7SL397P-201ENST00000487309 OVOS2Q6IE36 1432 aa13.59□□□□□ -0.23
RN7SL397P-201ENST00000487309 TMC1Q8TDI8 760 aa13.59□□□□□ -0.23
RN7SL397P-201ENST00000487309 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.23
RN7SL397P-201ENST00000487309 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.23
RN7SL397P-201ENST00000487309 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.23
RN7SL397P-201ENST00000487309 DDB1Q16531 1140 aa13.58□□□□□ -0.24
RN7SL397P-201ENST00000487309 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
RN7SL397P-201ENST00000487309 KCNH5Q8NCM2 988 aa13.58□□□□□ -0.24
RN7SL397P-201ENST00000487309 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
RN7SL397P-201ENST00000487309 USP31Q70CQ4 1352 aa13.58□□□□□ -0.24
RN7SL397P-201ENST00000487309 ABCC6O95255 1503 aa13.57□□□□□ -0.24
RN7SL397P-201ENST00000487309 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
RN7SL397P-201ENST00000487309 TESK2Q96S53 571 aa13.56□□□□□ -0.24
RN7SL397P-201ENST00000487309 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
RN7SL397P-201ENST00000487309 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
RN7SL397P-201ENST00000487309 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
RN7SL397P-201ENST00000487309 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
RN7SL397P-201ENST00000487309 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
RN7SL397P-201ENST00000487309 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
RN7SL397P-201ENST00000487309 ERBB3P21860 1342 aa13.53□□□□□ -0.24
RN7SL397P-201ENST00000487309 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
RN7SL397P-201ENST00000487309 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
RN7SL397P-201ENST00000487309 NHSQ6T4R5 1651 aa13.52□□□□□ -0.25
RN7SL397P-201ENST00000487309 BTAF1O14981 1849 aa13.51□□□□□ -0.25
RN7SL397P-201ENST00000487309 BCL9O00512 1426 aa13.51□□□□□ -0.25
RN7SL397P-201ENST00000487309 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
RN7SL397P-201ENST00000487309 PROM2Q8N271 834 aa13.51□□□□□ -0.25
RN7SL397P-201ENST00000487309 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
RN7SL397P-201ENST00000487309 KCNQ2O43526 872 aa13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 FBLN1P23142 703 aa13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
RN7SL397P-201ENST00000487309 PLSCR1O15162 318 aa13.49□□□□□ -0.25
RN7SL397P-201ENST00000487309 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
RN7SL397P-201ENST00000487309 ANKRD24Q8TF21 1146 aa13.49□□□□□ -0.25
RN7SL397P-201ENST00000487309 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
RN7SL397P-201ENST00000487309 FAM208AQ9UK61 1670 aaKnown RBP13.48□□□□□ -0.25
RN7SL397P-201ENST00000487309 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
RN7SL397P-201ENST00000487309 EXOC5O00471 708 aa13.48□□□□□ -0.25
RN7SL397P-201ENST00000487309 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
RN7SL397P-201ENST00000487309 USP47Q96K76 1375 aa13.47□□□□□ -0.25
RN7SL397P-201ENST00000487309 LTV1Q96GA3 475 aaPredicted RBP13.47□□□□□ -0.25
RN7SL397P-201ENST00000487309 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
RN7SL397P-201ENST00000487309 KIF20BQ96Q89 1820 aa13.47□□□□□ -0.25
RN7SL397P-201ENST00000487309 MYOM1P52179 1685 aa13.47□□□□□ -0.25
RN7SL397P-201ENST00000487309 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
RN7SL397P-201ENST00000487309 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
RN7SL397P-201ENST00000487309 IL2RBP14784 551 aa13.45□□□□□ -0.26
RN7SL397P-201ENST00000487309 IP6K1Q92551 441 aa13.45□□□□□ -0.26
RN7SL397P-201ENST00000487309 PAPPAQ13219 1627 aa13.45□□□□□ -0.26
RN7SL397P-201ENST00000487309 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
RN7SL397P-201ENST00000487309 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
RN7SL397P-201ENST00000487309 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
RN7SL397P-201ENST00000487309 HOXC9P31274 260 aa13.43□□□□□ -0.26
RN7SL397P-201ENST00000487309 COG3Q96JB2 828 aa13.43□□□□□ -0.26
RN7SL397P-201ENST00000487309 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
RN7SL397P-201ENST00000487309 ZBTB7AO95365 584 aa13.42□□□□□ -0.26
RN7SL397P-201ENST00000487309 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
RN7SL397P-201ENST00000487309 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
RN7SL397P-201ENST00000487309 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
RN7SL397P-201ENST00000487309 MEGF6O75095 1541 aa13.42□□□□□ -0.26
RN7SL397P-201ENST00000487309 FYB1O15117 783 aa13.41□□□□□ -0.26
RN7SL397P-201ENST00000487309 TMF1P82094 1093 aa13.4□□□□□ -0.26
RN7SL397P-201ENST00000487309 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
RN7SL397P-201ENST00000487309 PTGER2P43116 358 aa13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 AMPHP49418 695 aa13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 LY75O60449 1722 aa13.39□□□□□ -0.27
RN7SL397P-201ENST00000487309 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 ZNF827Q17R98 1081 aa13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 LRRC4BQ9NT99 713 aa13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 STK32BQ9NY57 414 aa13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
RN7SL397P-201ENST00000487309 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
RN7SL397P-201ENST00000487309 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms