RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
GABPA-203ENST00000487266 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
GABPA-203ENST00000487266 KCNH5Q8NCM2 988 aa22.23■■□□□ 1.15
GABPA-203ENST00000487266 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
GABPA-203ENST00000487266 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
GABPA-203ENST00000487266 CRB1P82279 1406 aa22.22■■□□□ 1.15
GABPA-203ENST00000487266 PARP4Q9UKK3 1724 aaKnown RBP22.2■■□□□ 1.14
GABPA-203ENST00000487266 TCP11L2Q8N4U5 519 aa22.2■■□□□ 1.14
GABPA-203ENST00000487266 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
GABPA-203ENST00000487266 LRRC37A3O60309 1634 aa22.19■■□□□ 1.14
GABPA-203ENST00000487266 ABCC6O95255 1503 aa22.18■■□□□ 1.14
GABPA-203ENST00000487266 BARGINQ6ZT62 677 aa22.18■■□□□ 1.14
GABPA-203ENST00000487266 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
GABPA-203ENST00000487266 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
GABPA-203ENST00000487266 TOM1L2Q6ZVM7 507 aa22.17■■□□□ 1.14
GABPA-203ENST00000487266 DEFB132Q7Z7B7 95 aa22.17■■□□□ 1.14
GABPA-203ENST00000487266 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
GABPA-203ENST00000487266 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
GABPA-203ENST00000487266 CCDC125Q86Z20 511 aa22.15■■□□□ 1.14
GABPA-203ENST00000487266 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
GABPA-203ENST00000487266 CSB-PGBD3P0DP91 1061 aa22.12■■□□□ 1.13
GABPA-203ENST00000487266 FBLN1P23142 703 aa22.12■■□□□ 1.13
GABPA-203ENST00000487266 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
GABPA-203ENST00000487266 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
GABPA-203ENST00000487266 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
GABPA-203ENST00000487266 SF3B2Q13435 895 aaKnown RBP22.1■■□□□ 1.13
GABPA-203ENST00000487266 COG3Q96JB2 828 aa22.1■■□□□ 1.13
GABPA-203ENST00000487266 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
GABPA-203ENST00000487266 ERBB3P21860 1342 aa22.09■■□□□ 1.13
GABPA-203ENST00000487266 PEAK1Q9H792 1746 aa22.09■■□□□ 1.13
GABPA-203ENST00000487266 NSD3Q9BZ95 1437 aa22.09■■□□□ 1.13
GABPA-203ENST00000487266 EIF4G2P78344 907 aaKnown RBP eCLIP22.09■■□□□ 1.13
GABPA-203ENST00000487266 DISP2A7MBM2 1401 aa22.08■■□□□ 1.13
GABPA-203ENST00000487266 PDE3BQ13370 1112 aa22.08■■□□□ 1.13
GABPA-203ENST00000487266 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.13
GABPA-203ENST00000487266 FYB1O15117 783 aa22.07■■□□□ 1.12
GABPA-203ENST00000487266 TRIM37O94972 964 aa22.06■■□□□ 1.12
GABPA-203ENST00000487266 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
GABPA-203ENST00000487266 RGPD2P0DJD1 1756 aa22.06■■□□□ 1.12
GABPA-203ENST00000487266 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
GABPA-203ENST00000487266 FAM196AQ6ZSG2 479 aa22.05■■□□□ 1.12
GABPA-203ENST00000487266 ANKRD24Q8TF21 1146 aa22.05■■□□□ 1.12
GABPA-203ENST00000487266 SBF2Q86WG5 1849 aa22.04■■□□□ 1.12
GABPA-203ENST00000487266 CCDC7Q96M83 1385 aa22.03■■□□□ 1.12
GABPA-203ENST00000487266 BAG6P46379 1132 aa22.03■■□□□ 1.12
GABPA-203ENST00000487266 EN1Q05925 392 aaPredicted RBP22.03■■□□□ 1.12
GABPA-203ENST00000487266 RRS1Q15050 365 aaKnown RBP22.03■■□□□ 1.12
GABPA-203ENST00000487266 DDB1Q16531 1140 aa22.03■■□□□ 1.12
GABPA-203ENST00000487266 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
GABPA-203ENST00000487266 NLRP2Q9NX02 1062 aa22.03■■□□□ 1.12
GABPA-203ENST00000487266 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
GABPA-203ENST00000487266 OVOS2A0A0G2JMS6 1433 aa22.02■■□□□ 1.12
GABPA-203ENST00000487266 IP6K1Q92551 441 aa22.01■■□□□ 1.11
GABPA-203ENST00000487266 C11orf95C9JLR9 678 aaPredicted RBP22■■□□□ 1.11
GABPA-203ENST00000487266 HOXC9P31274 260 aa22■■□□□ 1.11
GABPA-203ENST00000487266 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
GABPA-203ENST00000487266 AMPHP49418 695 aa21.99■■□□□ 1.11
GABPA-203ENST00000487266 MARCH10Q8NA82 808 aaPredicted RBP21.98■■□□□ 1.11
GABPA-203ENST00000487266 CDCA7Q9BWT1 371 aaPredicted RBP21.98■■□□□ 1.11
GABPA-203ENST00000487266 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
GABPA-203ENST00000487266 EZH2Q15910 746 aaKnown RBP21.97■■□□□ 1.11
GABPA-203ENST00000487266 RREB1Q92766 1687 aa21.97■■□□□ 1.11
GABPA-203ENST00000487266 RTL1A6NKG5 1358 aa21.97■■□□□ 1.11
GABPA-203ENST00000487266 SRCAPQ6ZRS2 3230 aa21.97■■□□□ 1.11
GABPA-203ENST00000487266 APBA3O96018 575 aa21.96■■□□□ 1.11
GABPA-203ENST00000487266 NUP188Q5SRE5 1749 aa21.95■■□□□ 1.1
GABPA-203ENST00000487266 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
GABPA-203ENST00000487266 IL2RBP14784 551 aa21.93■■□□□ 1.1
GABPA-203ENST00000487266 CAMKK2Q96RR4 588 aa21.93■■□□□ 1.1
GABPA-203ENST00000487266 MAP2P11137 1827 aaKnown RBP21.92■■□□□ 1.1
GABPA-203ENST00000487266 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
GABPA-203ENST00000487266 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
GABPA-203ENST00000487266 PANK3Q9H999 370 aa21.92■■□□□ 1.1
GABPA-203ENST00000487266 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
GABPA-203ENST00000487266 PSDA5PKW4 1024 aaPredicted RBP21.91■■□□□ 1.1
GABPA-203ENST00000487266 EXOC5O00471 708 aa21.91■■□□□ 1.1
GABPA-203ENST00000487266 HSP90AB2PQ58FF8 381 aa21.91■■□□□ 1.1
GABPA-203ENST00000487266 MEGF6O75095 1541 aa21.9■■□□□ 1.1
GABPA-203ENST00000487266 FLT4P35916 1363 aa21.9■■□□□ 1.1
GABPA-203ENST00000487266 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
GABPA-203ENST00000487266 NHSQ6T4R5 1651 aa21.89■■□□□ 1.1
GABPA-203ENST00000487266 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.1
GABPA-203ENST00000487266 BCL9O00512 1426 aa21.89■■□□□ 1.09
GABPA-203ENST00000487266 RGPD3A6NKT7 1758 aaPredicted RBP21.88■■□□□ 1.09
GABPA-203ENST00000487266 RGPD4Q7Z3J3 1758 aa21.88■■□□□ 1.09
GABPA-203ENST00000487266 SMG6Q86US8 1419 aaKnown RBP21.88■■□□□ 1.09
GABPA-203ENST00000487266 INSRP06213 1382 aa21.87■■□□□ 1.09
GABPA-203ENST00000487266 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
GABPA-203ENST00000487266 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
GABPA-203ENST00000487266 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
GABPA-203ENST00000487266 TNNT2P45379 298 aaPredicted RBP21.86■■□□□ 1.09
GABPA-203ENST00000487266 PARD3Q8TEW0 1356 aa21.86■■□□□ 1.09
GABPA-203ENST00000487266 ACSBG1Q96GR2 724 aa21.85■■□□□ 1.09
GABPA-203ENST00000487266 KIF24Q5T7B8 1368 aa21.85■■□□□ 1.09
GABPA-203ENST00000487266 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
GABPA-203ENST00000487266 KCNQ2O43526 872 aa21.84■■□□□ 1.09
GABPA-203ENST00000487266 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
GABPA-203ENST00000487266 DOT1LQ8TEK3 1739 aa21.83■■□□□ 1.09
GABPA-203ENST00000487266 BTAF1O14981 1849 aa21.83■■□□□ 1.09
GABPA-203ENST00000487266 R3HDM1Q15032 1099 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms