RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 KRT85P78386 507 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-206ENST00000487222 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-206ENST00000487222 RTEL1-TNFRSF6BF6WH68 1400 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 JMYQ8N9B5 988 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
EPHB4-206ENST00000487222 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-206ENST00000487222 OFD1O75665 1012 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
EPHB4-206ENST00000487222 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
EPHB4-206ENST00000487222 FCHSD2O94868 740 aa17.5■□□□□ 0.39
EPHB4-206ENST00000487222 CCDC43Q96MW1 224 aaKnown RBP17.5■□□□□ 0.39
EPHB4-206ENST00000487222 CCDC141Q6ZP82 1450 aa17.49■□□□□ 0.39
EPHB4-206ENST00000487222 FYB1O15117 783 aa17.49■□□□□ 0.39
EPHB4-206ENST00000487222 ATP2B1P20020 1258 aa17.49■□□□□ 0.39
EPHB4-206ENST00000487222 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
EPHB4-206ENST00000487222 SMARCE1Q969G3 411 aa17.48■□□□□ 0.39
EPHB4-206ENST00000487222 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-206ENST00000487222 SPC24Q8NBT2 197 aa17.48■□□□□ 0.39
EPHB4-206ENST00000487222 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-206ENST00000487222 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-206ENST00000487222 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
EPHB4-206ENST00000487222 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
EPHB4-206ENST00000487222 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
EPHB4-206ENST00000487222 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
EPHB4-206ENST00000487222 ESPNB1AK53 854 aa17.47■□□□□ 0.39
EPHB4-206ENST00000487222 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
EPHB4-206ENST00000487222 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
EPHB4-206ENST00000487222 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
EPHB4-206ENST00000487222 EPS15P42566 896 aa17.46■□□□□ 0.39
EPHB4-206ENST00000487222 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
EPHB4-206ENST00000487222 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
EPHB4-206ENST00000487222 TXLNAP40222 546 aa17.46■□□□□ 0.39
EPHB4-206ENST00000487222 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
EPHB4-206ENST00000487222 CWC15Q9P013 229 aaKnown RBP17.46■□□□□ 0.39
EPHB4-206ENST00000487222 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.38
EPHB4-206ENST00000487222 CCDC66A2RUB6 948 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 CT47A1Q5JQC4 288 aaPredicted RBP17.45■□□□□ 0.38
EPHB4-206ENST00000487222 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
EPHB4-206ENST00000487222 ME1P48163 572 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
EPHB4-206ENST00000487222 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■■□ 20
EPHB4-206ENST00000487222 KDM4AO75164 1064 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 TTLL5Q6EMB2 1281 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 KIF6Q6ZMV9 814 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 STK3Q13188 491 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
EPHB4-206ENST00000487222 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
EPHB4-206ENST00000487222 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
EPHB4-206ENST00000487222 SERPINC1P01008 464 aa17.43■□□□□ 0.38
EPHB4-206ENST00000487222 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
EPHB4-206ENST00000487222 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
EPHB4-206ENST00000487222 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
EPHB4-206ENST00000487222 CUL7Q14999 1698 aa17.43■□□□□ 0.38
EPHB4-206ENST00000487222 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
EPHB4-206ENST00000487222 MAGEC2Q9UBF1 373 aaPredicted RBP17.43■□□□□ 0.38
EPHB4-206ENST00000487222 ABCC5O15440 1437 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 NSD3Q9BZ95 1437 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
EPHB4-206ENST00000487222 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 TRIM22Q8IYM9 498 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 SIL1Q9H173 461 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
EPHB4-206ENST00000487222 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 PLB1Q6P1J6 1458 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 KRT32Q14532 448 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
EPHB4-206ENST00000487222 AACSQ86V21 672 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
EPHB4-206ENST00000487222 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
EPHB4-206ENST00000487222 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
EPHB4-206ENST00000487222 NUP62CLQ9H1M0 184 aa17.4■□□□□ 0.38
EPHB4-206ENST00000487222 MTMR7Q9Y216 660 aa17.4■□□□□ 0.38
EPHB4-206ENST00000487222 POGZQ7Z3K3 1410 aa17.4■□□□□ 0.38
EPHB4-206ENST00000487222 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
EPHB4-206ENST00000487222 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
EPHB4-206ENST00000487222 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
EPHB4-206ENST00000487222 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
EPHB4-206ENST00000487222 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.37
EPHB4-206ENST00000487222 ODF2Q5BJF6 829 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 CWC27Q6UX04 472 aaKnown RBP17.39■□□□□ 0.37
EPHB4-206ENST00000487222 MPNDQ8N594 471 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 ZNHIT6Q9NWK9 470 aaKnown RBP17.39■□□□□ 0.37
EPHB4-206ENST00000487222 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 ZSCAN30Q86W11 494 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 MYO6Q9UM54 1294 aa17.39■□□□□ 0.37
EPHB4-206ENST00000487222 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
EPHB4-206ENST00000487222 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms