RNA–Protein interactions for RNA: ENST00000486056.1

CREB3-202, Transcript of cAMP responsive element binding protein 3, humanhuman

TSL 2

Gene CREB3, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3-202ENST00000486056 NUDCQ9Y266 331 aa23.66■■□□□ 1.38
CREB3-202ENST00000486056 NUTM2BA6NNL0 878 aaPredicted RBP23.65■■□□□ 1.38
CREB3-202ENST00000486056 NUTM2EB1AL46 878 aaPredicted RBP23.65■■□□□ 1.38
CREB3-202ENST00000486056 NUTM2AQ8IVF1 878 aaPredicted RBP23.65■■□□□ 1.38
CREB3-202ENST00000486056 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.38
CREB3-202ENST00000486056 CHRNA2Q15822 529 aa23.64■■□□□ 1.38
CREB3-202ENST00000486056 COL3A1P02461 1466 aaPredicted RBP23.64■■□□□ 1.38
CREB3-202ENST00000486056 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
CREB3-202ENST00000486056 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
CREB3-202ENST00000486056 ABCC6O95255 1503 aa23.63■■□□□ 1.37
CREB3-202ENST00000486056 LTN1O94822 1766 aa23.62■■□□□ 1.37
CREB3-202ENST00000486056 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
CREB3-202ENST00000486056 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
CREB3-202ENST00000486056 IL13P35225 146 aa23.62■■□□□ 1.37
CREB3-202ENST00000486056 EIF4A2Q14240 407 aaKnown RBP23.62■■□□□ 1.37
CREB3-202ENST00000486056 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
CREB3-202ENST00000486056 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
CREB3-202ENST00000486056 U2SURPO15042 1029 aaKnown RBP23.58■■□□□ 1.37
CREB3-202ENST00000486056 ANKRD24Q8TF21 1146 aa23.57■■□□□ 1.36
CREB3-202ENST00000486056 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
CREB3-202ENST00000486056 ERBB3P21860 1342 aa23.56■■□□□ 1.36
CREB3-202ENST00000486056 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
CREB3-202ENST00000486056 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
CREB3-202ENST00000486056 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
CREB3-202ENST00000486056 COL18A1P39060 1754 aa23.55■■□□□ 1.36
CREB3-202ENST00000486056 BTG4Q9NY30 223 aa23.54■■□□□ 1.36
CREB3-202ENST00000486056 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
CREB3-202ENST00000486056 COL14A1Q05707 1796 aaKnown RBP23.53■■□□□ 1.36
CREB3-202ENST00000486056 LMO7Q8WWI1 1683 aa23.53■■□□□ 1.36
CREB3-202ENST00000486056 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
CREB3-202ENST00000486056 EVA1CP58658 441 aa23.53■■□□□ 1.36
CREB3-202ENST00000486056 EYA1Q99502 592 aa23.52■■□□□ 1.36
CREB3-202ENST00000486056 LRP6O75581 1613 aa23.51■■□□□ 1.35
CREB3-202ENST00000486056 MEX3CQ5U5Q3 659 aaKnown RBP23.51■■□□□ 1.35
CREB3-202ENST00000486056 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
CREB3-202ENST00000486056 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
CREB3-202ENST00000486056 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
CREB3-202ENST00000486056 FCHSD2O94868 740 aa23.5■■□□□ 1.35
CREB3-202ENST00000486056 NGLY1Q96IV0 654 aa23.5■■□□□ 1.35
CREB3-202ENST00000486056 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
CREB3-202ENST00000486056 WDR17Q8IZU2 1322 aa23.5■■□□□ 1.35
CREB3-202ENST00000486056 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
CREB3-202ENST00000486056 SULT6B1Q6IMI4 303 aa23.49■■□□□ 1.35
CREB3-202ENST00000486056 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
CREB3-202ENST00000486056 STRN4Q9NRL3 753 aa23.49■■□□□ 1.35
CREB3-202ENST00000486056 HMOX1P09601 288 aa23.48■■□□□ 1.35
CREB3-202ENST00000486056 NLRP2Q9NX02 1062 aa23.48■■□□□ 1.35
CREB3-202ENST00000486056 TOM1L2Q6ZVM7 507 aa23.47■■□□□ 1.35
CREB3-202ENST00000486056 FNBP4Q8N3X1 1017 aaPredicted RBP23.47■■□□□ 1.35
CREB3-202ENST00000486056 SLIT2O94813 1529 aa23.47■■□□□ 1.35
CREB3-202ENST00000486056 RSPH6AQ9H0K4 717 aa23.46■■□□□ 1.35
CREB3-202ENST00000486056 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
CREB3-202ENST00000486056 KDRP35968 1356 aa23.45■■□□□ 1.34
CREB3-202ENST00000486056 NEFMP07197 916 aa23.44■■□□□ 1.34
CREB3-202ENST00000486056 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
CREB3-202ENST00000486056 RGPD1P0DJD0 1748 aa23.44■■□□□ 1.34
CREB3-202ENST00000486056 AEBP1Q8IUX7 1158 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 CARD10Q9BWT7 1032 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 CRB1P82279 1406 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 PRKAR2BP31323 418 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 USHBP1Q8N6Y0 703 aa23.43■■□□□ 1.34
CREB3-202ENST00000486056 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
CREB3-202ENST00000486056 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CREB3-202ENST00000486056 CCDC146Q8IYE0 955 aa23.42■■□□□ 1.34
CREB3-202ENST00000486056 PLEKHF1Q96S99 279 aa23.42■■□□□ 1.34
CREB3-202ENST00000486056 PLCH1Q4KWH8 1693 aa23.41■■□□□ 1.34
CREB3-202ENST00000486056 NWD2Q9ULI1 1742 aa23.4■■□□□ 1.34
CREB3-202ENST00000486056 USP21Q9UK80 565 aa23.4■■□□□ 1.34
CREB3-202ENST00000486056 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
CREB3-202ENST00000486056 BCL9LQ86UU0 1499 aa23.39■■□□□ 1.33
CREB3-202ENST00000486056 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
CREB3-202ENST00000486056 AFF2P51816 1311 aa23.37■■□□□ 1.33
CREB3-202ENST00000486056 NRAPQ86VF7 1730 aa23.36■■□□□ 1.33
CREB3-202ENST00000486056 VPS72Q15906 364 aa23.36■■□□□ 1.33
CREB3-202ENST00000486056 APAF1O14727 1248 aa23.35■■□□□ 1.33
CREB3-202ENST00000486056 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
CREB3-202ENST00000486056 TCP11L2Q8N4U5 519 aa23.35■■□□□ 1.33
CREB3-202ENST00000486056 USP35Q9P2H5 1018 aa23.35■■□□□ 1.33
CREB3-202ENST00000486056 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
CREB3-202ENST00000486056 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
CREB3-202ENST00000486056 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
CREB3-202ENST00000486056 PHACTR3Q96KR7 559 aa23.34■■□□□ 1.33
CREB3-202ENST00000486056 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
CREB3-202ENST00000486056 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.33
CREB3-202ENST00000486056 SPATA31A5Q5VU36 1347 aa23.33■■□□□ 1.33
CREB3-202ENST00000486056 SPATA31A7Q8IWB4 1347 aa23.33■■□□□ 1.33
CREB3-202ENST00000486056 NGEFQ8N5V2 710 aa23.33■■□□□ 1.33
CREB3-202ENST00000486056 RGPD2P0DJD1 1756 aa23.33■■□□□ 1.32
CREB3-202ENST00000486056 IL2RBP14784 551 aa23.32■■□□□ 1.32
CREB3-202ENST00000486056 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
CREB3-202ENST00000486056 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
CREB3-202ENST00000486056 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
CREB3-202ENST00000486056 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
CREB3-202ENST00000486056 ILDR1Q86SU0 546 aaPredicted RBP23.3■■□□□ 1.32
CREB3-202ENST00000486056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.3■■□□□ 1.32
CREB3-202ENST00000486056 TRPC5Q9UL62 973 aaPredicted RBP23.3■■□□□ 1.32
CREB3-202ENST00000486056 NFE2L2Q16236 605 aa23.3■■□□□ 1.32
CREB3-202ENST00000486056 NCBP3Q53F19 620 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms