RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 VPS72Q15906 364 aa29.41■■■□□ 2.3
NECAB3-211ENST00000485399 PLEKHG5O94827 1062 aa29.4■■■□□ 2.3
NECAB3-211ENST00000485399 NRAPQ86VF7 1730 aa29.4■■■□□ 2.3
NECAB3-211ENST00000485399 USP19O94966 1318 aa29.4■■■□□ 2.3
NECAB3-211ENST00000485399 KCNH5Q8NCM2 988 aa29.39■■■□□ 2.3
NECAB3-211ENST00000485399 SLIT3O75094 1523 aa29.38■■■□□ 2.29
NECAB3-211ENST00000485399 CRYBG1Q9Y4K1 1723 aa29.38■■■□□ 2.29
NECAB3-211ENST00000485399 MAP2P11137 1827 aaKnown RBP29.38■■■□□ 2.29
NECAB3-211ENST00000485399 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
NECAB3-211ENST00000485399 ONECUT3O60422 494 aaPredicted RBP29.36■■■□□ 2.29
NECAB3-211ENST00000485399 SEPT12Q8IYM1 358 aa29.35■■■□□ 2.29
NECAB3-211ENST00000485399 BLMP54132 1417 aaPredicted RBP29.35■■■□□ 2.29
NECAB3-211ENST00000485399 GCP02774 474 aa29.34■■■□□ 2.29
NECAB3-211ENST00000485399 PHRF1Q9P1Y6 1649 aaKnown RBP29.33■■■□□ 2.29
NECAB3-211ENST00000485399 SOX12O15370 315 aa29.33■■■□□ 2.29
NECAB3-211ENST00000485399 MTHFSP49914 203 aa29.33■■■□□ 2.29
NECAB3-211ENST00000485399 POLKQ9UBT6 870 aa29.33■■■□□ 2.29
NECAB3-211ENST00000485399 NFAT5O94916 1531 aa29.32■■■□□ 2.28
NECAB3-211ENST00000485399 FBLN1P23142 703 aa29.32■■■□□ 2.28
NECAB3-211ENST00000485399 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
NECAB3-211ENST00000485399 RRS1Q15050 365 aaKnown RBP29.3■■■□□ 2.28
NECAB3-211ENST00000485399 SMG6Q86US8 1419 aaKnown RBP29.3■■■□□ 2.28
NECAB3-211ENST00000485399 MRS2Q9HD23 443 aa29.29■■■□□ 2.28
NECAB3-211ENST00000485399 CFAP53Q96M91 514 aa29.28■■■□□ 2.28
NECAB3-211ENST00000485399 CCDC9Q9Y3X0 531 aaKnown RBP29.28■■■□□ 2.28
NECAB3-211ENST00000485399 EMILIN1Q9Y6C2 1016 aa29.27■■■□□ 2.28
NECAB3-211ENST00000485399 MAP3K19Q56UN5 1328 aa29.27■■■□□ 2.28
NECAB3-211ENST00000485399 CCDC184Q52MB2 194 aa29.26■■■□□ 2.28
NECAB3-211ENST00000485399 LTN1O94822 1766 aa29.26■■■□□ 2.27
NECAB3-211ENST00000485399 KIF24Q5T7B8 1368 aa29.26■■■□□ 2.27
NECAB3-211ENST00000485399 PPM1GO15355 546 aaPredicted RBP29.26■■■□□ 2.27
NECAB3-211ENST00000485399 BTG4Q9NY30 223 aa29.26■■■□□ 2.27
NECAB3-211ENST00000485399 KRT27Q7Z3Y8 459 aa29.24■■■□□ 2.27
NECAB3-211ENST00000485399 DEFB132Q7Z7B7 95 aa29.24■■■□□ 2.27
NECAB3-211ENST00000485399 ARHGEF25Q86VW2 580 aa29.24■■■□□ 2.27
NECAB3-211ENST00000485399 AMPHP49418 695 aa29.23■■■□□ 2.27
NECAB3-211ENST00000485399 INSRP06213 1382 aa29.23■■■□□ 2.27
NECAB3-211ENST00000485399 PEAK1Q9H792 1746 aa29.21■■■□□ 2.27
NECAB3-211ENST00000485399 ZC3H6P61129 1189 aaKnown RBP29.21■■■□□ 2.27
NECAB3-211ENST00000485399 RTL1A6NKG5 1358 aa29.21■■■□□ 2.27
NECAB3-211ENST00000485399 FLT4P35916 1363 aa29.21■■■□□ 2.27
NECAB3-211ENST00000485399 CPDO75976 1380 aa29.2■■■□□ 2.26
NECAB3-211ENST00000485399 FAM98CQ17RN3 349 aaKnown RBP29.2■■■□□ 2.26
NECAB3-211ENST00000485399 ZBTB7CA1YPR0 619 aa29.18■■■□□ 2.26
NECAB3-211ENST00000485399 THSD7AQ9UPZ6 1657 aa29.18■■■□□ 2.26
NECAB3-211ENST00000485399 HOXC9P31274 260 aa29.17■■■□□ 2.26
NECAB3-211ENST00000485399 IP6K1Q92551 441 aa29.17■■■□□ 2.26
NECAB3-211ENST00000485399 SPATA31A5Q5VU36 1347 aa29.17■■■□□ 2.26
NECAB3-211ENST00000485399 SPATA31A7Q8IWB4 1347 aa29.17■■■□□ 2.26
NECAB3-211ENST00000485399 COL3A1P02461 1466 aaPredicted RBP29.16■■■□□ 2.26
NECAB3-211ENST00000485399 KIAA0232Q92628 1395 aa29.16■■■□□ 2.26
NECAB3-211ENST00000485399 DIAPH1O60610 1272 aaKnown RBP29.15■■■□□ 2.26
NECAB3-211ENST00000485399 ABCC6O95255 1503 aa29.15■■■□□ 2.26
NECAB3-211ENST00000485399 SF3B2Q13435 895 aaKnown RBP29.14■■■□□ 2.26
NECAB3-211ENST00000485399 A0A0G2JS52 829 aa29.13■■■□□ 2.25
NECAB3-211ENST00000485399 MYT1Q01538 1121 aa29.13■■■□□ 2.25
NECAB3-211ENST00000485399 PNISRQ8TF01 805 aaKnown RBP29.13■■■□□ 2.25
NECAB3-211ENST00000485399 PRDM11Q9NQV5 511 aa29.13■■■□□ 2.25
NECAB3-211ENST00000485399 HSP90AB2PQ58FF8 381 aa29.13■■■□□ 2.25
NECAB3-211ENST00000485399 NUDCQ9Y266 331 aa29.13■■■□□ 2.25
NECAB3-211ENST00000485399 COL18A1P39060 1754 aa29.11■■■□□ 2.25
NECAB3-211ENST00000485399 WDR43Q15061 677 aaKnown RBP eCLIP29.11■■■□□ 2.25
NECAB3-211ENST00000485399 RGPD1P0DJD0 1748 aa29.09■■■□□ 2.25
NECAB3-211ENST00000485399 IL13P35225 146 aa29.08■■■□□ 2.25
NECAB3-211ENST00000485399 EIF4A2Q14240 407 aaKnown RBP29.08■■■□□ 2.25
NECAB3-211ENST00000485399 CHRNA2Q15822 529 aa29.08■■■□□ 2.25
NECAB3-211ENST00000485399 SPATA31A1Q5TZJ5 1347 aa29.07■■■□□ 2.24
NECAB3-211ENST00000485399 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
NECAB3-211ENST00000485399 RGPD5Q99666 1765 aa29.07■■■□□ 2.24
NECAB3-211ENST00000485399 FAM182BQ5T319 152 aa29.06■■■□□ 2.24
NECAB3-211ENST00000485399 TNS1Q9HBL0 1735 aaKnown RBP29.06■■■□□ 2.24
NECAB3-211ENST00000485399 AXIN2Q9Y2T1 843 aa29.05■■■□□ 2.24
NECAB3-211ENST00000485399 LMO7Q8WWI1 1683 aa29.05■■■□□ 2.24
NECAB3-211ENST00000485399 U2SURPO15042 1029 aaKnown RBP29.03■■■□□ 2.24
NECAB3-211ENST00000485399 BAG6P46379 1132 aa29.03■■■□□ 2.24
NECAB3-211ENST00000485399 ANKRD24Q8TF21 1146 aa29.02■■■□□ 2.24
NECAB3-211ENST00000485399 LTV1Q96GA3 475 aaPredicted RBP29.02■■■□□ 2.24
NECAB3-211ENST00000485399 LRP5O75197 1615 aa29.01■■■□□ 2.24
NECAB3-211ENST00000485399 ADAMTS8Q9UP79 889 aa29.01■■■□□ 2.24
NECAB3-211ENST00000485399 U2AF1L5P0DN76 240 aaPredicted RBP29.01■■■□□ 2.23
NECAB3-211ENST00000485399 U2AF1Q01081 240 aaKnown RBP eCLIP29.01■■■□□ 2.232e-6■■□□□ 12.5
NECAB3-211ENST00000485399 CAMTA1Q9Y6Y1 1673 aa29■■■□□ 2.23
NECAB3-211ENST00000485399 DISP2A7MBM2 1401 aa29■■■□□ 2.23
NECAB3-211ENST00000485399 STRN4Q9NRL3 753 aa29■■■□□ 2.23
NECAB3-211ENST00000485399 ERBB3P21860 1342 aa28.98■■■□□ 2.23
NECAB3-211ENST00000485399 EN1Q05925 392 aaPredicted RBP28.97■■■□□ 2.23
NECAB3-211ENST00000485399 FAM208AQ9UK61 1670 aaKnown RBP28.97■■■□□ 2.23
NECAB3-211ENST00000485399 COL5A2P05997 1499 aaPredicted RBP28.95■■■□□ 2.23
NECAB3-211ENST00000485399 EYA1Q99502 592 aa28.95■■■□□ 2.22
NECAB3-211ENST00000485399 PNNQ9H307 717 aaKnown RBP28.95■■■□□ 2.22
NECAB3-211ENST00000485399 IGSF1Q8N6C5 1336 aa28.95■■■□□ 2.22
NECAB3-211ENST00000485399 CSB-PGBD3P0DP91 1061 aa28.94■■■□□ 2.22
NECAB3-211ENST00000485399 EVA1CP58658 441 aa28.94■■■□□ 2.22
NECAB3-211ENST00000485399 PSDA5PKW4 1024 aaPredicted RBP28.93■■■□□ 2.22
NECAB3-211ENST00000485399 FCHSD2O94868 740 aa28.93■■■□□ 2.22
NECAB3-211ENST00000485399 BARGINQ6ZT62 677 aa28.92■■■□□ 2.22
NECAB3-211ENST00000485399 RGPD2P0DJD1 1756 aa28.92■■■□□ 2.22
NECAB3-211ENST00000485399 LARP1Q6PKG0 1096 aaKnown RBP28.91■■■□□ 2.22
NECAB3-211ENST00000485399 WDR17Q8IZU2 1322 aa28.91■■■□□ 2.22
NECAB3-211ENST00000485399 NBPF6Q5VWK0 638 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms