RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 SOX11P35716 441 aa7.55□□□□□ -1.2
TM9SF3-205ENST00000485093 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
TM9SF3-205ENST00000485093 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 C14orf37Q86TY3 774 aa7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 CEP126Q9P2H0 1117 aa7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
TM9SF3-205ENST00000485093 SUZ12Q15022 739 aaKnown RBP7.53□□□□□ -1.2
TM9SF3-205ENST00000485093 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
TM9SF3-205ENST00000485093 C1orf115Q9H7X2 142 aa7.53□□□□□ -1.2
TM9SF3-205ENST00000485093 SMPD1P17405 629 aa7.52□□□□□ -1.21
TM9SF3-205ENST00000485093 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
TM9SF3-205ENST00000485093 CDV3Q9UKY7 258 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-205ENST00000485093 ZCCHC6Q5VYS8 1495 aaKnown RBP7.51□□□□□ -1.21
TM9SF3-205ENST00000485093 EIF4G2P78344 907 aaKnown RBP eCLIP7.51□□□□□ -1.21
TM9SF3-205ENST00000485093 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
TM9SF3-205ENST00000485093 AVPP01185 164 aa7.5□□□□□ -1.21
TM9SF3-205ENST00000485093 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
TM9SF3-205ENST00000485093 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
TM9SF3-205ENST00000485093 UCN2Q96RP3 112 aa7.5□□□□□ -1.21
TM9SF3-205ENST00000485093 J3QL48 77 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 ADH1CP00326 375 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 FOXC1Q12948 553 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 NR5A1Q13285 461 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 ZNF777Q9ULD5 760 aaPredicted RBP7.49□□□□□ -1.21
TM9SF3-205ENST00000485093 TNFRSF10AO00220 468 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 NR3C2P08235 984 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 AGERQ15109 404 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 TLL2Q9Y6L7 1015 aa7.48□□□□□ -1.21
TM9SF3-205ENST00000485093 ST8SIA5O15466 376 aa7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 SRPK2P78362 688 aaKnown RBP7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 WWC1Q8IX03 1113 aa7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 GLMNQ92990 594 aa7.47□□□□□ -1.21
TM9SF3-205ENST00000485093 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
TM9SF3-205ENST00000485093 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
TM9SF3-205ENST00000485093 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 NBPF20Q3BBV1 942 aa7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 CRIPAKQ8N1N5 446 aa7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 CCDC85AQ96PX6 553 aaPredicted RBP7.45□□□□□ -1.22
TM9SF3-205ENST00000485093 FAM187AA6NFU0 413 aa7.44□□□□□ -1.22
TM9SF3-205ENST00000485093 PIK3CDO00329 1044 aa7.44□□□□□ -1.22
TM9SF3-205ENST00000485093 LILRA1O75019 489 aa7.44□□□□□ -1.22
TM9SF3-205ENST00000485093 ALDH1A1P00352 501 aa7.44□□□□□ -1.22
TM9SF3-205ENST00000485093 ERVH48-1M5A8F1 160 aa7.43□□□□□ -1.22
TM9SF3-205ENST00000485093 KDF1Q8NAX2 398 aaPredicted RBP7.43□□□□□ -1.22
TM9SF3-205ENST00000485093 HPS1Q92902 700 aa7.43□□□□□ -1.22
TM9SF3-205ENST00000485093 NNTQ13423 1086 aa7.42□□□□□ -1.22
TM9SF3-205ENST00000485093 CFAP70Q5T0N1 1121 aa7.42□□□□□ -1.22
TM9SF3-205ENST00000485093 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
TM9SF3-205ENST00000485093 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
TM9SF3-205ENST00000485093 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
TM9SF3-205ENST00000485093 TTC24A2A3L6 582 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 TIMP2P16035 220 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 ERVK-9P63128 1117 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 MAP7D1Q3KQU3 841 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 Q6ZVU0 165 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 CDCA7Q9BWT1 371 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-205ENST00000485093 PALM3A6NDB9 673 aaPredicted RBP7.4□□□□□ -1.22
TM9SF3-205ENST00000485093 ATP9BO43861 1147 aa7.4□□□□□ -1.22
TM9SF3-205ENST00000485093 FSHRP23945 695 aa7.4□□□□□ -1.22
TM9SF3-205ENST00000485093 ADD1P35611 737 aaKnown RBP7.4□□□□□ -1.22
TM9SF3-205ENST00000485093 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
TM9SF3-205ENST00000485093 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 KANK4Q5T7N3 995 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 PLPP7Q8NBV4 271 aa7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 TMPRSS4Q9NRS4 437 aa7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 MAFBQ9Y5Q3 323 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
TM9SF3-205ENST00000485093 DKK1O94907 266 aa7.38□□□□□ -1.23
TM9SF3-205ENST00000485093 ITPKCQ96DU7 683 aa7.38□□□□□ -1.23
TM9SF3-205ENST00000485093 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 ZBTB7BO15156 539 aaPredicted RBP7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 SCTRP47872 440 aa7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 CTC1Q2NKJ3 1217 aa7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 RNF135Q8IUD6 432 aa7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 ZNF784Q8NCA9 323 aaPredicted RBP7.37□□□□□ -1.23
TM9SF3-205ENST00000485093 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms