RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 EVA1CP58658 441 aa24.51■■□□□ 1.51
SREBF1-213ENST00000485080 GGNBP2Q9H3C7 697 aa24.51■■□□□ 1.51
SREBF1-213ENST00000485080 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
SREBF1-213ENST00000485080 WASHC2AQ641Q2 1341 aa24.51■■□□□ 1.51
SREBF1-213ENST00000485080 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
SREBF1-213ENST00000485080 CCDC9Q9Y3X0 531 aaKnown RBP24.49■■□□□ 1.51
SREBF1-213ENST00000485080 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
SREBF1-213ENST00000485080 LARP1Q6PKG0 1096 aaKnown RBP24.47■■□□□ 1.51
SREBF1-213ENST00000485080 NSD2O96028 1365 aa24.46■■□□□ 1.51
SREBF1-213ENST00000485080 ZBTB7CA1YPR0 619 aa24.46■■□□□ 1.51
SREBF1-213ENST00000485080 LTN1O94822 1766 aa24.46■■□□□ 1.51
SREBF1-213ENST00000485080 WDR17Q8IZU2 1322 aa24.45■■□□□ 1.5
SREBF1-213ENST00000485080 IP6K1Q92551 441 aa24.45■■□□□ 1.5
SREBF1-213ENST00000485080 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
SREBF1-213ENST00000485080 CRB1P82279 1406 aa24.44■■□□□ 1.5
SREBF1-213ENST00000485080 MAP3K19Q56UN5 1328 aa24.44■■□□□ 1.5
SREBF1-213ENST00000485080 BARGINQ6ZT62 677 aa24.44■■□□□ 1.5
SREBF1-213ENST00000485080 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-213ENST00000485080 KIF24Q5T7B8 1368 aa24.43■■□□□ 1.5
SREBF1-213ENST00000485080 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 PER1O15534 1290 aaPredicted RBP24.42■■□□□ 1.5
SREBF1-213ENST00000485080 SEPT12Q8IYM1 358 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 EP400Q96L91 3159 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 RGPD5Q99666 1765 aa24.42■■□□□ 1.5
SREBF1-213ENST00000485080 ERBB3P21860 1342 aa24.41■■□□□ 1.5
SREBF1-213ENST00000485080 FAM98CQ17RN3 349 aaKnown RBP24.41■■□□□ 1.5
SREBF1-213ENST00000485080 CARD10Q9BWT7 1032 aa24.4■■□□□ 1.5
SREBF1-213ENST00000485080 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
SREBF1-213ENST00000485080 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
SREBF1-213ENST00000485080 FBLN1P23142 703 aa24.39■■□□□ 1.49
SREBF1-213ENST00000485080 AMER1Q5JTC6 1135 aaPredicted RBP24.39■■□□□ 1.49
SREBF1-213ENST00000485080 HOXC9P31274 260 aa24.38■■□□□ 1.49
SREBF1-213ENST00000485080 TOM1L2Q6ZVM7 507 aa24.38■■□□□ 1.49
SREBF1-213ENST00000485080 AMPHP49418 695 aa24.37■■□□□ 1.49
SREBF1-213ENST00000485080 RRS1Q15050 365 aaKnown RBP24.36■■□□□ 1.49
SREBF1-213ENST00000485080 NPC1L1Q9UHC9 1359 aa24.36■■□□□ 1.49
SREBF1-213ENST00000485080 ANKRD24Q8TF21 1146 aa24.35■■□□□ 1.49
SREBF1-213ENST00000485080 FLT4P35916 1363 aa24.34■■□□□ 1.49
SREBF1-213ENST00000485080 BRWD3Q6RI45 1802 aa24.34■■□□□ 1.49
SREBF1-213ENST00000485080 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
SREBF1-213ENST00000485080 USP35Q9P2H5 1018 aa24.34■■□□□ 1.49
SREBF1-213ENST00000485080 INSRP06213 1382 aa24.33■■□□□ 1.49
SREBF1-213ENST00000485080 CDCA7Q9BWT1 371 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-213ENST00000485080 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
SREBF1-213ENST00000485080 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
SREBF1-213ENST00000485080 POLKQ9UBT6 870 aa24.31■■□□□ 1.48
SREBF1-213ENST00000485080 PEAK1Q9H792 1746 aa24.3■■□□□ 1.48
SREBF1-213ENST00000485080 MORC1Q86VD1 984 aa24.3■■□□□ 1.48
SREBF1-213ENST00000485080 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.481e-9■■■□□ 19.2
SREBF1-213ENST00000485080 MAP2P11137 1827 aaKnown RBP24.3■■□□□ 1.48
SREBF1-213ENST00000485080 PARP4Q9UKK3 1724 aaKnown RBP24.3■■□□□ 1.48
SREBF1-213ENST00000485080 DISP2A7MBM2 1401 aa24.29■■□□□ 1.48
SREBF1-213ENST00000485080 A0A0G2JS52 829 aa24.29■■□□□ 1.48
SREBF1-213ENST00000485080 MYT1Q01538 1121 aa24.29■■□□□ 1.48
SREBF1-213ENST00000485080 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
SREBF1-213ENST00000485080 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
SREBF1-213ENST00000485080 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
SREBF1-213ENST00000485080 NLRP2Q9NX02 1062 aa24.28■■□□□ 1.48
SREBF1-213ENST00000485080 WNK3Q9BYP7 1800 aa24.26■■□□□ 1.47
SREBF1-213ENST00000485080 CCDC125Q86Z20 511 aa24.24■■□□□ 1.47
SREBF1-213ENST00000485080 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
SREBF1-213ENST00000485080 TNNT2P45379 298 aaPredicted RBP24.23■■□□□ 1.47
SREBF1-213ENST00000485080 PDE3BQ13370 1112 aa24.22■■□□□ 1.47
SREBF1-213ENST00000485080 DDB1Q16531 1140 aa24.21■■□□□ 1.47
SREBF1-213ENST00000485080 PPM1GO15355 546 aaPredicted RBP24.2■■□□□ 1.46
SREBF1-213ENST00000485080 IL2RBP14784 551 aa24.2■■□□□ 1.46
SREBF1-213ENST00000485080 NBPF6Q5VWK0 638 aa24.2■■□□□ 1.46
SREBF1-213ENST00000485080 NBPF4Q96M43 638 aa24.2■■□□□ 1.46
SREBF1-213ENST00000485080 LRRC37A3O60309 1634 aa24.2■■□□□ 1.46
SREBF1-213ENST00000485080 NCAPD2Q15021 1401 aa24.19■■□□□ 1.46
SREBF1-213ENST00000485080 CC2D1BQ5T0F9 858 aaKnown RBP24.19■■□□□ 1.46
SREBF1-213ENST00000485080 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
SREBF1-213ENST00000485080 BCL9O00512 1426 aa24.18■■□□□ 1.46
SREBF1-213ENST00000485080 EXOC5O00471 708 aa24.17■■□□□ 1.46
SREBF1-213ENST00000485080 TNS2Q63HR2 1409 aa24.17■■□□□ 1.46
SREBF1-213ENST00000485080 RGPD2P0DJD1 1756 aa24.16■■□□□ 1.46
SREBF1-213ENST00000485080 EIF4A2Q14240 407 aaKnown RBP24.14■■□□□ 1.45
SREBF1-213ENST00000485080 OVOS2A0A0G2JMS6 1433 aa24.13■■□□□ 1.45
SREBF1-213ENST00000485080 MARCH10Q8NA82 808 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-213ENST00000485080 MTHFSP49914 203 aa24.12■■□□□ 1.45
SREBF1-213ENST00000485080 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
SREBF1-213ENST00000485080 EYA1Q99502 592 aa24.12■■□□□ 1.45
SREBF1-213ENST00000485080 PLEKHG2Q9H7P9 1386 aa24.11■■□□□ 1.45
SREBF1-213ENST00000485080 MEGF6O75095 1541 aa24.1■■□□□ 1.45
SREBF1-213ENST00000485080 RAPGEF4Q8WZA2 1011 aa24.09■■□□□ 1.45
SREBF1-213ENST00000485080 IGSF1Q8N6C5 1336 aa24.09■■□□□ 1.45
SREBF1-213ENST00000485080 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
SREBF1-213ENST00000485080 IL13P35225 146 aa24.07■■□□□ 1.44
SREBF1-213ENST00000485080 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
SREBF1-213ENST00000485080 ZCRB1Q8TBF4 217 aaKnown RBP24.07■■□□□ 1.44
SREBF1-213ENST00000485080 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
SREBF1-213ENST00000485080 TATP17735 454 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-213ENST00000485080 SF3B2Q13435 895 aaKnown RBP24.05■■□□□ 1.44
SREBF1-213ENST00000485080 PARD3Q8TEW0 1356 aa24.04■■□□□ 1.44
SREBF1-213ENST00000485080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.04■■□□□ 1.44
SREBF1-213ENST00000485080 TRIM37O94972 964 aa24.03■■□□□ 1.44
SREBF1-213ENST00000485080 SBF2Q86WG5 1849 aa24.03■■□□□ 1.44
SREBF1-213ENST00000485080 KDRP35968 1356 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms