RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
HDAC6-226ENST00000483656 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
HDAC6-226ENST00000483656 NHSL1Q5SYE7 1610 aa13.37□□□□□ -0.27
HDAC6-226ENST00000483656 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 HMOX1P09601 288 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 IP6K1Q92551 441 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
HDAC6-226ENST00000483656 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-226ENST00000483656 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
HDAC6-226ENST00000483656 LTN1O94822 1766 aa13.35□□□□□ -0.27
HDAC6-226ENST00000483656 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
HDAC6-226ENST00000483656 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
HDAC6-226ENST00000483656 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
HDAC6-226ENST00000483656 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
HDAC6-226ENST00000483656 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
HDAC6-226ENST00000483656 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
HDAC6-226ENST00000483656 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
HDAC6-226ENST00000483656 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
HDAC6-226ENST00000483656 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
HDAC6-226ENST00000483656 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
HDAC6-226ENST00000483656 TMPOP42166 694 aaKnown RBP13.33□□□□□ -0.28
HDAC6-226ENST00000483656 EYA1Q99502 592 aa13.33□□□□□ -0.28
HDAC6-226ENST00000483656 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.28
HDAC6-226ENST00000483656 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
HDAC6-226ENST00000483656 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
HDAC6-226ENST00000483656 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
HDAC6-226ENST00000483656 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
HDAC6-226ENST00000483656 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
HDAC6-226ENST00000483656 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-226ENST00000483656 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
HDAC6-226ENST00000483656 ZC3H6P61129 1189 aaKnown RBP13.31□□□□□ -0.28
HDAC6-226ENST00000483656 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
HDAC6-226ENST00000483656 TRMT2AQ8IZ69 625 aaKnown RBP13.31□□□□□ -0.28
HDAC6-226ENST00000483656 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-226ENST00000483656 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
HDAC6-226ENST00000483656 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
HDAC6-226ENST00000483656 KDRP35968 1356 aa13.31□□□□□ -0.28
HDAC6-226ENST00000483656 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
HDAC6-226ENST00000483656 SLFN5Q08AF3 891 aa13.3□□□□□ -0.28
HDAC6-226ENST00000483656 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-226ENST00000483656 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
HDAC6-226ENST00000483656 COL18A1P39060 1754 aa13.3□□□□□ -0.28
HDAC6-226ENST00000483656 NFE2L2Q16236 605 aa13.29□□□□□ -0.28
HDAC6-226ENST00000483656 CPDO75976 1380 aa13.29□□□□□ -0.28
HDAC6-226ENST00000483656 RIPK4P57078 832 aa13.28□□□□□ -0.28
HDAC6-226ENST00000483656 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
HDAC6-226ENST00000483656 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
HDAC6-226ENST00000483656 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
HDAC6-226ENST00000483656 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
HDAC6-226ENST00000483656 TOM1O60784 492 aa13.27□□□□□ -0.29
HDAC6-226ENST00000483656 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
HDAC6-226ENST00000483656 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
HDAC6-226ENST00000483656 KIAA0232Q92628 1395 aa13.27□□□□□ -0.29
HDAC6-226ENST00000483656 ABCA3Q99758 1704 aa13.27□□□□□ -0.29
HDAC6-226ENST00000483656 NCAPD2Q15021 1401 aa13.26□□□□□ -0.29
HDAC6-226ENST00000483656 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
HDAC6-226ENST00000483656 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
HDAC6-226ENST00000483656 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
HDAC6-226ENST00000483656 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
HDAC6-226ENST00000483656 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
HDAC6-226ENST00000483656 ABCC6O95255 1503 aa13.25□□□□□ -0.29
HDAC6-226ENST00000483656 E9PSI1 815 aa13.25□□□□□ -0.29
HDAC6-226ENST00000483656 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
HDAC6-226ENST00000483656 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
HDAC6-226ENST00000483656 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-226ENST00000483656 NEFMP07197 916 aa13.24□□□□□ -0.29
HDAC6-226ENST00000483656 PIP4K2BP78356 416 aa13.24□□□□□ -0.29
HDAC6-226ENST00000483656 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
HDAC6-226ENST00000483656 ERBB3P21860 1342 aa13.23□□□□□ -0.29
HDAC6-226ENST00000483656 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
HDAC6-226ENST00000483656 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
HDAC6-226ENST00000483656 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-226ENST00000483656 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
HDAC6-226ENST00000483656 IL16Q14005 1332 aa13.22□□□□□ -0.29
HDAC6-226ENST00000483656 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
HDAC6-226ENST00000483656 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
HDAC6-226ENST00000483656 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
HDAC6-226ENST00000483656 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
HDAC6-226ENST00000483656 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
HDAC6-226ENST00000483656 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
HDAC6-226ENST00000483656 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-226ENST00000483656 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
HDAC6-226ENST00000483656 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
HDAC6-226ENST00000483656 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
HDAC6-226ENST00000483656 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
HDAC6-226ENST00000483656 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
HDAC6-226ENST00000483656 COL5A2P05997 1499 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-226ENST00000483656 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
HDAC6-226ENST00000483656 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
HDAC6-226ENST00000483656 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
HDAC6-226ENST00000483656 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
HDAC6-226ENST00000483656 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
HDAC6-226ENST00000483656 MCM10Q7L590 875 aa13.16□□□□□ -0.3
HDAC6-226ENST00000483656 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
HDAC6-226ENST00000483656 CRB1P82279 1406 aa13.15□□□□□ -0.3
HDAC6-226ENST00000483656 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
HDAC6-226ENST00000483656 FKBP8Q14318 412 aa13.15□□□□□ -0.3
HDAC6-226ENST00000483656 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms