RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 COL18A1P39060 1754 aa23.5■■□□□ 1.35
RAB11FIP3-209ENST00000483002 PARP4Q9UKK3 1724 aaKnown RBP23.48■■□□□ 1.35
RAB11FIP3-209ENST00000483002 C11orf95C9JLR9 678 aaPredicted RBP23.48■■□□□ 1.35
RAB11FIP3-209ENST00000483002 SLC12A5Q9H2X9 1139 aa23.48■■□□□ 1.35
RAB11FIP3-209ENST00000483002 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
RAB11FIP3-209ENST00000483002 LRP5O75197 1615 aa23.46■■□□□ 1.35
RAB11FIP3-209ENST00000483002 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
RAB11FIP3-209ENST00000483002 NME9Q86XW9 330 aa23.46■■□□□ 1.35
RAB11FIP3-209ENST00000483002 CDCA7Q9BWT1 371 aaPredicted RBP23.45■■□□□ 1.34
RAB11FIP3-209ENST00000483002 CARD10Q9BWT7 1032 aa23.45■■□□□ 1.34
RAB11FIP3-209ENST00000483002 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
RAB11FIP3-209ENST00000483002 OVOS2A0A0G2JMS6 1433 aa23.44■■□□□ 1.34
RAB11FIP3-209ENST00000483002 OVOS2A0A0J9YW53 1432 aa23.44■■□□□ 1.34
RAB11FIP3-209ENST00000483002 OVOS2Q6IE36 1432 aa23.44■■□□□ 1.34
RAB11FIP3-209ENST00000483002 NBPF14Q5TI25 921 aa23.44■■□□□ 1.34
RAB11FIP3-209ENST00000483002 MARCH10Q8NA82 808 aaPredicted RBP23.42■■□□□ 1.34
RAB11FIP3-209ENST00000483002 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
RAB11FIP3-209ENST00000483002 NFAT5O94916 1531 aa23.42■■□□□ 1.34
RAB11FIP3-209ENST00000483002 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
RAB11FIP3-209ENST00000483002 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
RAB11FIP3-209ENST00000483002 USP31Q70CQ4 1352 aa23.41■■□□□ 1.34
RAB11FIP3-209ENST00000483002 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
RAB11FIP3-209ENST00000483002 EXOC5O00471 708 aa23.4■■□□□ 1.34
RAB11FIP3-209ENST00000483002 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
RAB11FIP3-209ENST00000483002 LRRC37A3O60309 1634 aa23.4■■□□□ 1.34
RAB11FIP3-209ENST00000483002 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.33
RAB11FIP3-209ENST00000483002 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
RAB11FIP3-209ENST00000483002 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
RAB11FIP3-209ENST00000483002 PEAK1Q9H792 1746 aa23.38■■□□□ 1.33
RAB11FIP3-209ENST00000483002 PLSCR1O15162 318 aa23.37■■□□□ 1.33
RAB11FIP3-209ENST00000483002 TESK2Q96S53 571 aa23.37■■□□□ 1.33
RAB11FIP3-209ENST00000483002 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
RAB11FIP3-209ENST00000483002 RREB1Q92766 1687 aa23.37■■□□□ 1.33
RAB11FIP3-209ENST00000483002 CCDC7Q96M83 1385 aa23.37■■□□□ 1.33
RAB11FIP3-209ENST00000483002 EDC4Q6P2E9 1401 aaKnown RBP23.36■■□□□ 1.33
RAB11FIP3-209ENST00000483002 A0A1W2PP64 1363 aa23.36■■□□□ 1.33
RAB11FIP3-209ENST00000483002 SBF2Q86WG5 1849 aa23.36■■□□□ 1.33
RAB11FIP3-209ENST00000483002 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
RAB11FIP3-209ENST00000483002 ERBB3P21860 1342 aa23.33■■□□□ 1.33
RAB11FIP3-209ENST00000483002 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.33
RAB11FIP3-209ENST00000483002 ANKRD24Q8TF21 1146 aa23.32■■□□□ 1.32
RAB11FIP3-209ENST00000483002 ABCC6O95255 1503 aa23.32■■□□□ 1.32
RAB11FIP3-209ENST00000483002 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
RAB11FIP3-209ENST00000483002 PROM2Q8N271 834 aa23.3■■□□□ 1.32
RAB11FIP3-209ENST00000483002 BCL9O00512 1426 aa23.3■■□□□ 1.32
RAB11FIP3-209ENST00000483002 LTN1O94822 1766 aa23.29■■□□□ 1.32
RAB11FIP3-209ENST00000483002 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
RAB11FIP3-209ENST00000483002 IL2RBP14784 551 aa23.29■■□□□ 1.32
RAB11FIP3-209ENST00000483002 KCNQ2O43526 872 aa23.28■■□□□ 1.32
RAB11FIP3-209ENST00000483002 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
RAB11FIP3-209ENST00000483002 IP6K1Q92551 441 aa23.27■■□□□ 1.32
RAB11FIP3-209ENST00000483002 LTV1Q96GA3 475 aaPredicted RBP23.27■■□□□ 1.32
RAB11FIP3-209ENST00000483002 COG3Q96JB2 828 aa23.27■■□□□ 1.32
RAB11FIP3-209ENST00000483002 SPON1Q9HCB6 807 aa23.27■■□□□ 1.32
RAB11FIP3-209ENST00000483002 ACSBG1Q96GR2 724 aa23.26■■□□□ 1.31
RAB11FIP3-209ENST00000483002 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
RAB11FIP3-209ENST00000483002 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
RAB11FIP3-209ENST00000483002 KAT6BQ8WYB5 2073 aa23.25■■□□□ 1.31
RAB11FIP3-209ENST00000483002 FBLN1P23142 703 aa23.25■■□□□ 1.31
RAB11FIP3-209ENST00000483002 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
RAB11FIP3-209ENST00000483002 TMF1P82094 1093 aa23.24■■□□□ 1.31
RAB11FIP3-209ENST00000483002 PPP1R1BQ9UD71 204 aaPredicted RBP23.24■■□□□ 1.31
RAB11FIP3-209ENST00000483002 RGPD3A6NKT7 1758 aaPredicted RBP23.23■■□□□ 1.31
RAB11FIP3-209ENST00000483002 RGPD4Q7Z3J3 1758 aa23.23■■□□□ 1.31
RAB11FIP3-209ENST00000483002 AMPHP49418 695 aa23.22■■□□□ 1.31
RAB11FIP3-209ENST00000483002 USP47Q96K76 1375 aa23.22■■□□□ 1.31
RAB11FIP3-209ENST00000483002 MAP3K19Q56UN5 1328 aa23.21■■□□□ 1.31
RAB11FIP3-209ENST00000483002 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
RAB11FIP3-209ENST00000483002 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
RAB11FIP3-209ENST00000483002 HOXC9P31274 260 aa23.19■■□□□ 1.3
RAB11FIP3-209ENST00000483002 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
RAB11FIP3-209ENST00000483002 STK32BQ9NY57 414 aa23.19■■□□□ 1.3
RAB11FIP3-209ENST00000483002 GGNBP2Q9H3C7 697 aa23.18■■□□□ 1.3
RAB11FIP3-209ENST00000483002 FYB1O15117 783 aa23.17■■□□□ 1.3
RAB11FIP3-209ENST00000483002 ZBTB7AO95365 584 aa23.16■■□□□ 1.3
RAB11FIP3-209ENST00000483002 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
RAB11FIP3-209ENST00000483002 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
RAB11FIP3-209ENST00000483002 CDCA8Q53HL2 280 aa23.15■■□□□ 1.3
RAB11FIP3-209ENST00000483002 NHSQ6T4R5 1651 aa23.13■■□□□ 1.29
RAB11FIP3-209ENST00000483002 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
RAB11FIP3-209ENST00000483002 ATF5Q9Y2D1 282 aaPredicted RBP23.13■■□□□ 1.29
RAB11FIP3-209ENST00000483002 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
RAB11FIP3-209ENST00000483002 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
RAB11FIP3-209ENST00000483002 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
RAB11FIP3-209ENST00000483002 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
RAB11FIP3-209ENST00000483002 FAM208AQ9UK61 1670 aaKnown RBP23.09■■□□□ 1.29
RAB11FIP3-209ENST00000483002 BTAF1O14981 1849 aa23.08■■□□□ 1.29
RAB11FIP3-209ENST00000483002 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.29
RAB11FIP3-209ENST00000483002 NBPF4Q96M43 638 aa23.08■■□□□ 1.29
RAB11FIP3-209ENST00000483002 DCAF8L1A6NGE4 600 aa23.07■■□□□ 1.28
RAB11FIP3-209ENST00000483002 PTGER2P43116 358 aa23.07■■□□□ 1.28
RAB11FIP3-209ENST00000483002 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
RAB11FIP3-209ENST00000483002 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
RAB11FIP3-209ENST00000483002 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
RAB11FIP3-209ENST00000483002 RGPD2P0DJD1 1756 aa23.06■■□□□ 1.28
RAB11FIP3-209ENST00000483002 RTL1A6NKG5 1358 aa23.06■■□□□ 1.28
RAB11FIP3-209ENST00000483002 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
RAB11FIP3-209ENST00000483002 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
RAB11FIP3-209ENST00000483002 MTFR1LQ9H019 292 aa23.04■■□□□ 1.28
RAB11FIP3-209ENST00000483002 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms