RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
CBX3-206ENST00000481057 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
CBX3-206ENST00000481057 WNT7BP56706 349 aa12.15□□□□□ -0.46
CBX3-206ENST00000481057 SH3BP2P78314 561 aa12.15□□□□□ -0.46
CBX3-206ENST00000481057 SH3BP5LQ7L8J4 393 aa12.15□□□□□ -0.46
CBX3-206ENST00000481057 PRKD2Q9BZL6 878 aa12.15□□□□□ -0.46
CBX3-206ENST00000481057 GPSM3Q9Y4H4 160 aa12.15□□□□□ -0.46
CBX3-206ENST00000481057 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
CBX3-206ENST00000481057 SKOR1P84550 965 aa12.14□□□□□ -0.47
CBX3-206ENST00000481057 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
CBX3-206ENST00000481057 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 SPRYD7Q5W111 196 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 FOXJ1Q92949 421 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
CBX3-206ENST00000481057 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
CBX3-206ENST00000481057 PTK2Q05397 1052 aa12.12□□□□□ -0.47
CBX3-206ENST00000481057 POLA1P09884 1462 aaPredicted RBP12.12□□□□□ -0.47
CBX3-206ENST00000481057 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
CBX3-206ENST00000481057 NR1H3Q13133 447 aa12.11□□□□□ -0.47
CBX3-206ENST00000481057 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
CBX3-206ENST00000481057 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
CBX3-206ENST00000481057 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
CBX3-206ENST00000481057 TRAK2O60296 914 aa12.1□□□□□ -0.47
CBX3-206ENST00000481057 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
CBX3-206ENST00000481057 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
CBX3-206ENST00000481057 HSPA2P54652 639 aa12.09□□□□□ -0.47
CBX3-206ENST00000481057 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
CBX3-206ENST00000481057 AGERQ15109 404 aa12.09□□□□□ -0.47
CBX3-206ENST00000481057 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
CBX3-206ENST00000481057 PRDM2Q13029 1718 aa12.08□□□□□ -0.47
CBX3-206ENST00000481057 PTPRMP28827 1452 aa12.08□□□□□ -0.47
CBX3-206ENST00000481057 RGS20O76081 388 aa12.08□□□□□ -0.48
CBX3-206ENST00000481057 ZNF697Q5TEC3 545 aa12.08□□□□□ -0.48
CBX3-206ENST00000481057 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
CBX3-206ENST00000481057 MAGEB6P1A0A0J9YX57 407 aa12.07□□□□□ -0.48
CBX3-206ENST00000481057 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
CBX3-206ENST00000481057 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
CBX3-206ENST00000481057 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
CBX3-206ENST00000481057 SOGA1O94964 1423 aa12.06□□□□□ -0.48
CBX3-206ENST00000481057 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
CBX3-206ENST00000481057 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
CBX3-206ENST00000481057 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
CBX3-206ENST00000481057 WNT7AO00755 349 aa12.05□□□□□ -0.48
CBX3-206ENST00000481057 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
CBX3-206ENST00000481057 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
CBX3-206ENST00000481057 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
CBX3-206ENST00000481057 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
CBX3-206ENST00000481057 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
CBX3-206ENST00000481057 WIZO95785 1651 aa12.03□□□□□ -0.48
CBX3-206ENST00000481057 SHROOM2Q13796 1616 aa12.02□□□□□ -0.49
CBX3-206ENST00000481057 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.49
CBX3-206ENST00000481057 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.49
CBX3-206ENST00000481057 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
CBX3-206ENST00000481057 FAM174AQ8TBP5 190 aa12.01□□□□□ -0.49
CBX3-206ENST00000481057 MRGPRX2Q96LB1 330 aa12.01□□□□□ -0.49
CBX3-206ENST00000481057 SOX11P35716 441 aa12□□□□□ -0.49
CBX3-206ENST00000481057 PCDHB9Q9Y5E1 797 aa12□□□□□ -0.49
CBX3-206ENST00000481057 FOXC1Q12948 553 aa11.99□□□□□ -0.49
CBX3-206ENST00000481057 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
CBX3-206ENST00000481057 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
CBX3-206ENST00000481057 SIAH2O43255 324 aa11.98□□□□□ -0.49
CBX3-206ENST00000481057 GDF9O60383 454 aa11.98□□□□□ -0.49
CBX3-206ENST00000481057 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
CBX3-206ENST00000481057 ADAMTS19Q8TE59 1207 aa11.98□□□□□ -0.49
CBX3-206ENST00000481057 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
CBX3-206ENST00000481057 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
CBX3-206ENST00000481057 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
CBX3-206ENST00000481057 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
CBX3-206ENST00000481057 ALG2Q9H553 416 aa11.97□□□□□ -0.49
CBX3-206ENST00000481057 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
CBX3-206ENST00000481057 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.49
CBX3-206ENST00000481057 GLMNQ92990 594 aa11.96□□□□□ -0.49
CBX3-206ENST00000481057 MAP4K5Q9Y4K4 846 aa11.96□□□□□ -0.49
CBX3-206ENST00000481057 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.5
CBX3-206ENST00000481057 PRR20EP86478 221 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 PRR20CP86479 221 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 PRR20DP86480 221 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 PRR20BP86481 221 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 PRR20AP86496 221 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 SEMA3FQ13275 785 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 MPNDQ8N594 471 aa11.95□□□□□ -0.5
CBX3-206ENST00000481057 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
CBX3-206ENST00000481057 NUP160Q12769 1436 aa11.94□□□□□ -0.5
CBX3-206ENST00000481057 TNFRSF10AO00220 468 aa11.94□□□□□ -0.5
CBX3-206ENST00000481057 CDK15Q96Q40 435 aa11.94□□□□□ -0.5
CBX3-206ENST00000481057 KIF21BO75037 1637 aa11.93□□□□□ -0.5
CBX3-206ENST00000481057 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
CBX3-206ENST00000481057 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
CBX3-206ENST00000481057 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
CBX3-206ENST00000481057 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
CBX3-206ENST00000481057 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
CBX3-206ENST00000481057 GLI2P10070 1586 aa11.92□□□□□ -0.5
CBX3-206ENST00000481057 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
CBX3-206ENST00000481057 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
CBX3-206ENST00000481057 VASH1Q7L8A9 365 aaPredicted RBP11.91□□□□□ -0.5
CBX3-206ENST00000481057 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
CBX3-206ENST00000481057 CALR3Q96L12 384 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms