RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 WDR63Q8IWG1 891 aa19■□□□□ 0.63
PKNOX1-206ENST00000480179 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
PKNOX1-206ENST00000480179 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
PKNOX1-206ENST00000480179 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
PKNOX1-206ENST00000480179 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
PKNOX1-206ENST00000480179 PEAK1Q9H792 1746 aa18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 IL13P35225 146 aa18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
PKNOX1-206ENST00000480179 LRP6O75581 1613 aa18.98■□□□□ 0.63
PKNOX1-206ENST00000480179 SOX12O15370 315 aa18.98■□□□□ 0.63
PKNOX1-206ENST00000480179 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
PKNOX1-206ENST00000480179 FCHSD2O94868 740 aa18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 HMOX1P09601 288 aa18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 MST1RQ04912 1400 aa18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
PKNOX1-206ENST00000480179 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
PKNOX1-206ENST00000480179 MARF1Q9Y4F3 1742 aaKnown RBP18.95■□□□□ 0.62
PKNOX1-206ENST00000480179 NEFMP07197 916 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 RXRBP28702 533 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 RIPK4P57078 832 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 C20orf194Q5TEA3 1177 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
PKNOX1-206ENST00000480179 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
PKNOX1-206ENST00000480179 BCAR3O75815 825 aa18.91■□□□□ 0.62
PKNOX1-206ENST00000480179 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
PKNOX1-206ENST00000480179 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
PKNOX1-206ENST00000480179 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
PKNOX1-206ENST00000480179 NLRP6P59044 892 aa18.9■□□□□ 0.62
PKNOX1-206ENST00000480179 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
PKNOX1-206ENST00000480179 PHACTR3Q96KR7 559 aa18.9■□□□□ 0.62
PKNOX1-206ENST00000480179 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
PKNOX1-206ENST00000480179 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 ESCO1Q5FWF5 840 aa18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 TSR2Q969E8 191 aaKnown RBP18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 AFF2P51816 1311 aa18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
PKNOX1-206ENST00000480179 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
PKNOX1-206ENST00000480179 C8orf37Q96NL8 207 aa18.88■□□□□ 0.61
PKNOX1-206ENST00000480179 DLG5Q8TDM6 1919 aa18.88■□□□□ 0.61
PKNOX1-206ENST00000480179 SBNO1A3KN83 1393 aa18.88■□□□□ 0.61
PKNOX1-206ENST00000480179 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
PKNOX1-206ENST00000480179 ABTB2Q8N961 1025 aa18.87■□□□□ 0.61
PKNOX1-206ENST00000480179 IL16Q14005 1332 aa18.87■□□□□ 0.61
PKNOX1-206ENST00000480179 FLT4P35916 1363 aa18.87■□□□□ 0.61
PKNOX1-206ENST00000480179 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
PKNOX1-206ENST00000480179 AEBP1Q8IUX7 1158 aa18.86■□□□□ 0.61
PKNOX1-206ENST00000480179 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
PKNOX1-206ENST00000480179 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.61
PKNOX1-206ENST00000480179 AMPHP49418 695 aa18.85■□□□□ 0.61
PKNOX1-206ENST00000480179 RARSP54136 660 aaKnown RBP18.85■□□□□ 0.61
PKNOX1-206ENST00000480179 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
PKNOX1-206ENST00000480179 PSME1Q06323 249 aa18.84■□□□□ 0.61
PKNOX1-206ENST00000480179 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
PKNOX1-206ENST00000480179 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
PKNOX1-206ENST00000480179 QTRT2Q9H974 415 aaKnown RBP18.84■□□□□ 0.61
PKNOX1-206ENST00000480179 ADAMTS2O95450 1211 aa18.83■□□□□ 0.61
PKNOX1-206ENST00000480179 EXOSC9Q06265 439 aaKnown RBP18.83■□□□□ 0.6
PKNOX1-206ENST00000480179 THUMPD2Q9BTF0 503 aaKnown RBP18.83■□□□□ 0.6
PKNOX1-206ENST00000480179 LTN1O94822 1766 aa18.82■□□□□ 0.6
PKNOX1-206ENST00000480179 ARHGEF10O15013 1369 aa18.82■□□□□ 0.6
PKNOX1-206ENST00000480179 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
PKNOX1-206ENST00000480179 BCL2L13Q9BXK5 485 aa18.82■□□□□ 0.6
PKNOX1-206ENST00000480179 KIF1AQ12756 1690 aa18.81■□□□□ 0.6
PKNOX1-206ENST00000480179 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-206ENST00000480179 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-206ENST00000480179 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-206ENST00000480179 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
PKNOX1-206ENST00000480179 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
PKNOX1-206ENST00000480179 NFAT5O94916 1531 aa18.79■□□□□ 0.6
PKNOX1-206ENST00000480179 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-206ENST00000480179 FOXO3O43524 673 aa18.78■□□□□ 0.6
PKNOX1-206ENST00000480179 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-206ENST00000480179 HOXC9P31274 260 aa18.78■□□□□ 0.6
PKNOX1-206ENST00000480179 CALD1Q05682 793 aaKnown RBP18.78■□□□□ 0.6
PKNOX1-206ENST00000480179 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
PKNOX1-206ENST00000480179 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
PKNOX1-206ENST00000480179 PDE3AQ14432 1141 aa18.77■□□□□ 0.59
PKNOX1-206ENST00000480179 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.59
PKNOX1-206ENST00000480179 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
PKNOX1-206ENST00000480179 USP21Q9UK80 565 aa18.76■□□□□ 0.59
PKNOX1-206ENST00000480179 RTL1A6NKG5 1358 aa18.75■□□□□ 0.59
PKNOX1-206ENST00000480179 SMC4Q9NTJ3 1288 aa18.75■□□□□ 0.59
PKNOX1-206ENST00000480179 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 LTV1Q96GA3 475 aaPredicted RBP18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 EYA1Q99502 592 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 TNNQ9UQP3 1299 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 GNAI1P63096 354 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms