RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 LTN1O94822 1766 aa25.97■■□□□ 1.75
AGRN-208ENST00000479707 CGNL1Q0VF96 1302 aa25.97■■□□□ 1.75
AGRN-208ENST00000479707 LARP1Q6PKG0 1096 aaKnown RBP25.97■■□□□ 1.75
AGRN-208ENST00000479707 USP35Q9P2H5 1018 aa25.97■■□□□ 1.75
AGRN-208ENST00000479707 CDK12Q9NYV4 1490 aaPredicted RBP25.97■■□□□ 1.75
AGRN-208ENST00000479707 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
AGRN-208ENST00000479707 SPATA31A5Q5VU36 1347 aa25.95■■□□□ 1.75
AGRN-208ENST00000479707 SPATA31A7Q8IWB4 1347 aa25.95■■□□□ 1.75
AGRN-208ENST00000479707 SOCS7O14512 581 aa25.95■■□□□ 1.74
AGRN-208ENST00000479707 COL5A2P05997 1499 aaPredicted RBP25.94■■□□□ 1.74
AGRN-208ENST00000479707 FAM98CQ17RN3 349 aaKnown RBP25.94■■□□□ 1.74
AGRN-208ENST00000479707 A0A0G2JS52 829 aa25.93■■□□□ 1.74
AGRN-208ENST00000479707 MYT1Q01538 1121 aa25.93■■□□□ 1.74
AGRN-208ENST00000479707 RRS1Q15050 365 aaKnown RBP25.92■■□□□ 1.74
AGRN-208ENST00000479707 SPATA31A1Q5TZJ5 1347 aa25.91■■□□□ 1.74
AGRN-208ENST00000479707 CSB-PGBD3P0DP91 1061 aa25.91■■□□□ 1.74
AGRN-208ENST00000479707 SEPT12Q8IYM1 358 aa25.91■■□□□ 1.74
AGRN-208ENST00000479707 KNSTRNQ9Y448 316 aa25.91■■□□□ 1.74
AGRN-208ENST00000479707 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
AGRN-208ENST00000479707 TOM1L2Q6ZVM7 507 aa25.9■■□□□ 1.74
AGRN-208ENST00000479707 AMPHP49418 695 aa25.89■■□□□ 1.74
AGRN-208ENST00000479707 ONECUT3O60422 494 aaPredicted RBP25.87■■□□□ 1.73
AGRN-208ENST00000479707 TNNT2P45379 298 aaPredicted RBP25.87■■□□□ 1.73
AGRN-208ENST00000479707 IP6K1Q92551 441 aa25.87■■□□□ 1.73
AGRN-208ENST00000479707 WDR17Q8IZU2 1322 aa25.87■■□□□ 1.73
AGRN-208ENST00000479707 LTV1Q96GA3 475 aaPredicted RBP25.86■■□□□ 1.73
AGRN-208ENST00000479707 CRB1P82279 1406 aa25.86■■□□□ 1.73
AGRN-208ENST00000479707 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
AGRN-208ENST00000479707 TCP11L2Q8N4U5 519 aa25.85■■□□□ 1.73
AGRN-208ENST00000479707 ABCC6O95255 1503 aa25.84■■□□□ 1.73
AGRN-208ENST00000479707 HOXC9P31274 260 aa25.84■■□□□ 1.73
AGRN-208ENST00000479707 ANKRD24Q8TF21 1146 aa25.84■■□□□ 1.73
AGRN-208ENST00000479707 ANKRD26Q9UPS8 1709 aa25.84■■□□□ 1.73
AGRN-208ENST00000479707 CNGB1Q14028 1251 aaPredicted RBP25.83■■□□□ 1.73
AGRN-208ENST00000479707 MAP2P11137 1827 aaKnown RBP25.82■■□□□ 1.72
AGRN-208ENST00000479707 PER1O15534 1290 aaPredicted RBP25.82■■□□□ 1.72
AGRN-208ENST00000479707 EMILIN1Q9Y6C2 1016 aa25.82■■□□□ 1.72
AGRN-208ENST00000479707 ERBB3P21860 1342 aa25.82■■□□□ 1.72
AGRN-208ENST00000479707 PPM1GO15355 546 aaPredicted RBP25.81■■□□□ 1.72
AGRN-208ENST00000479707 MORC1Q86VD1 984 aa25.81■■□□□ 1.72
AGRN-208ENST00000479707 NLRP2Q9NX02 1062 aa25.81■■□□□ 1.72
AGRN-208ENST00000479707 AMER1Q5JTC6 1135 aaPredicted RBP25.8■■□□□ 1.72
AGRN-208ENST00000479707 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
AGRN-208ENST00000479707 THRAP3Q9Y2W1 955 aaKnown RBP25.8■■□□□ 1.72
AGRN-208ENST00000479707 NSD2O96028 1365 aa25.8■■□□□ 1.72
AGRN-208ENST00000479707 BLMP54132 1417 aaPredicted RBP25.8■■□□□ 1.72
AGRN-208ENST00000479707 CARD10Q9BWT7 1032 aa25.79■■□□□ 1.72
AGRN-208ENST00000479707 PEAK1Q9H792 1746 aa25.78■■□□□ 1.72
AGRN-208ENST00000479707 CC2D1BQ5T0F9 858 aaKnown RBP25.78■■□□□ 1.72
AGRN-208ENST00000479707 KRT27Q7Z3Y8 459 aa25.78■■□□□ 1.72
AGRN-208ENST00000479707 THSD7AQ9UPZ6 1657 aa25.77■■□□□ 1.72
AGRN-208ENST00000479707 HSP90AB2PQ58FF8 381 aa25.77■■□□□ 1.72
AGRN-208ENST00000479707 POLKQ9UBT6 870 aa25.76■■□□□ 1.71
AGRN-208ENST00000479707 RTL1A6NKG5 1358 aa25.76■■□□□ 1.71
AGRN-208ENST00000479707 FLT4P35916 1363 aa25.74■■□□□ 1.71
AGRN-208ENST00000479707 FAM182BQ5T319 152 aa25.74■■□□□ 1.71
AGRN-208ENST00000479707 UPF1Q92900 1129 aaKnown RBP eCLIP25.74■■□□□ 1.71
AGRN-208ENST00000479707 RGPD2P0DJD1 1756 aa25.73■■□□□ 1.71
AGRN-208ENST00000479707 PDE3BQ13370 1112 aa25.71■■□□□ 1.71
AGRN-208ENST00000479707 INSRP06213 1382 aa25.7■■□□□ 1.71
AGRN-208ENST00000479707 KIF24Q5T7B8 1368 aa25.7■■□□□ 1.71
AGRN-208ENST00000479707 WNK3Q9BYP7 1800 aa25.7■■□□□ 1.71
AGRN-208ENST00000479707 FAM208AQ9UK61 1670 aaKnown RBP25.68■■□□□ 1.7
AGRN-208ENST00000479707 DDB1Q16531 1140 aa25.68■■□□□ 1.7
AGRN-208ENST00000479707 SMG6Q86US8 1419 aaKnown RBP25.68■■□□□ 1.7
AGRN-208ENST00000479707 PARP4Q9UKK3 1724 aaKnown RBP25.68■■□□□ 1.7
AGRN-208ENST00000479707 NBPF6Q5VWK0 638 aa25.67■■□□□ 1.7
AGRN-208ENST00000479707 USHBP1Q8N6Y0 703 aa25.67■■□□□ 1.7
AGRN-208ENST00000479707 NBPF4Q96M43 638 aa25.67■■□□□ 1.7
AGRN-208ENST00000479707 CDCA7Q9BWT1 371 aaPredicted RBP25.66■■□□□ 1.7
AGRN-208ENST00000479707 IL2RBP14784 551 aa25.65■■□□□ 1.7
AGRN-208ENST00000479707 DDX10Q13206 875 aaKnown RBP25.65■■□□□ 1.7
AGRN-208ENST00000479707 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
AGRN-208ENST00000479707 EXOC5O00471 708 aa25.64■■□□□ 1.7
AGRN-208ENST00000479707 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
AGRN-208ENST00000479707 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
AGRN-208ENST00000479707 MTHFSP49914 203 aa25.6■■□□□ 1.69
AGRN-208ENST00000479707 EIF4A2Q14240 407 aaKnown RBP25.6■■□□□ 1.69
AGRN-208ENST00000479707 FAM196AQ6ZSG2 479 aa25.58■■□□□ 1.69
AGRN-208ENST00000479707 MARCH10Q8NA82 808 aaPredicted RBP25.58■■□□□ 1.69
AGRN-208ENST00000479707 EYA1Q99502 592 aa25.58■■□□□ 1.69
AGRN-208ENST00000479707 RAPGEF4Q8WZA2 1011 aa25.55■■□□□ 1.68
AGRN-208ENST00000479707 TRIM37O94972 964 aa25.54■■□□□ 1.68
AGRN-208ENST00000479707 SF3B2Q13435 895 aaKnown RBP25.54■■□□□ 1.68
AGRN-208ENST00000479707 CCDC125Q86Z20 511 aa25.54■■□□□ 1.68
AGRN-208ENST00000479707 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
AGRN-208ENST00000479707 MEGF6O75095 1541 aa25.53■■□□□ 1.68
AGRN-208ENST00000479707 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
AGRN-208ENST00000479707 DDX54Q8TDD1 881 aaKnown RBP25.53■■□□□ 1.68
AGRN-208ENST00000479707 EP400Q96L91 3159 aa25.52■■□□□ 1.68
AGRN-208ENST00000479707 OVOS2A0A0G2JMS6 1433 aa25.52■■□□□ 1.68
AGRN-208ENST00000479707 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
AGRN-208ENST00000479707 ZCRB1Q8TBF4 217 aaKnown RBP25.51■■□□□ 1.67
AGRN-208ENST00000479707 DEFB132Q7Z7B7 95 aa25.49■■□□□ 1.67
AGRN-208ENST00000479707 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
AGRN-208ENST00000479707 IL13P35225 146 aa25.48■■□□□ 1.67
AGRN-208ENST00000479707 RGPD1P0DJD0 1748 aa25.48■■□□□ 1.67
AGRN-208ENST00000479707 KAT6BQ8WYB5 2073 aa25.47■■□□□ 1.67
AGRN-208ENST00000479707 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
AGRN-208ENST00000479707 IGSF1Q8N6C5 1336 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms