RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TTC21AQ8NDW8 1320 aa24.63■■□□□ 1.53
ECHDC1-216ENST00000479525 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
ECHDC1-216ENST00000479525 SBF2Q86WG5 1849 aa24.62■■□□□ 1.53
ECHDC1-216ENST00000479525 ARHGEF25Q86VW2 580 aa24.61■■□□□ 1.53
ECHDC1-216ENST00000479525 FAM196AQ6ZSG2 479 aa24.6■■□□□ 1.53
ECHDC1-216ENST00000479525 USP54Q70EL1 1684 aa24.6■■□□□ 1.53
ECHDC1-216ENST00000479525 A0A1W2PP64 1363 aa24.59■■□□□ 1.53
ECHDC1-216ENST00000479525 APBA3O96018 575 aa24.58■■□□□ 1.53
ECHDC1-216ENST00000479525 PEAK1Q9H792 1746 aa24.58■■□□□ 1.53
ECHDC1-216ENST00000479525 CSB-PGBD3P0DP91 1061 aa24.57■■□□□ 1.52
ECHDC1-216ENST00000479525 TESK2Q96S53 571 aa24.57■■□□□ 1.52
ECHDC1-216ENST00000479525 RREB1Q92766 1687 aa24.57■■□□□ 1.52
ECHDC1-216ENST00000479525 WDR17Q8IZU2 1322 aa24.56■■□□□ 1.52
ECHDC1-216ENST00000479525 NUP188Q5SRE5 1749 aa24.56■■□□□ 1.52
ECHDC1-216ENST00000479525 HDGFL2Q7Z4V5 671 aaPredicted RBP24.56■■□□□ 1.52
ECHDC1-216ENST00000479525 KCNH5Q8NCM2 988 aa24.56■■□□□ 1.52
ECHDC1-216ENST00000479525 THRAP3Q9Y2W1 955 aaKnown RBP24.56■■□□□ 1.52
ECHDC1-216ENST00000479525 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
ECHDC1-216ENST00000479525 R3HDM1Q15032 1099 aaKnown RBP24.54■■□□□ 1.52
ECHDC1-216ENST00000479525 DISP2A7MBM2 1401 aa24.54■■□□□ 1.52
ECHDC1-216ENST00000479525 CAMKK2Q96RR4 588 aa24.54■■□□□ 1.52
ECHDC1-216ENST00000479525 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
ECHDC1-216ENST00000479525 DDB1Q16531 1140 aa24.52■■□□□ 1.52
ECHDC1-216ENST00000479525 PTF1AQ7RTS3 328 aa24.52■■□□□ 1.52
ECHDC1-216ENST00000479525 USP31Q70CQ4 1352 aa24.51■■□□□ 1.51
ECHDC1-216ENST00000479525 USP47Q96K76 1375 aa24.51■■□□□ 1.51
ECHDC1-216ENST00000479525 FBLN1P23142 703 aa24.5■■□□□ 1.51
ECHDC1-216ENST00000479525 OVOS2A0A0G2JMS6 1433 aa24.49■■□□□ 1.51
ECHDC1-216ENST00000479525 OVOS2A0A0J9YW53 1432 aa24.49■■□□□ 1.51
ECHDC1-216ENST00000479525 OVOS2Q6IE36 1432 aa24.49■■□□□ 1.51
ECHDC1-216ENST00000479525 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
ECHDC1-216ENST00000479525 TERF2IPQ9NYB0 399 aa24.49■■□□□ 1.51
ECHDC1-216ENST00000479525 LRP5O75197 1615 aa24.48■■□□□ 1.51
ECHDC1-216ENST00000479525 MARCH10Q8NA82 808 aaPredicted RBP24.47■■□□□ 1.51
ECHDC1-216ENST00000479525 CARD10Q9BWT7 1032 aa24.46■■□□□ 1.51
ECHDC1-216ENST00000479525 ABCC6O95255 1503 aa24.44■■□□□ 1.5
ECHDC1-216ENST00000479525 NLRP2Q9NX02 1062 aa24.44■■□□□ 1.5
ECHDC1-216ENST00000479525 KAT6BQ8WYB5 2073 aa24.44■■□□□ 1.5
ECHDC1-216ENST00000479525 LTV1Q96GA3 475 aaPredicted RBP24.43■■□□□ 1.5
ECHDC1-216ENST00000479525 ERBB3P21860 1342 aa24.43■■□□□ 1.5
ECHDC1-216ENST00000479525 MYOM1P52179 1685 aa24.43■■□□□ 1.5
ECHDC1-216ENST00000479525 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
ECHDC1-216ENST00000479525 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
ECHDC1-216ENST00000479525 PUS7Q96PZ0 661 aaKnown RBP24.4■■□□□ 1.5
ECHDC1-216ENST00000479525 CCDC7Q96M83 1385 aa24.39■■□□□ 1.5
ECHDC1-216ENST00000479525 TMF1P82094 1093 aa24.39■■□□□ 1.49
ECHDC1-216ENST00000479525 TNS2Q63HR2 1409 aa24.38■■□□□ 1.49
ECHDC1-216ENST00000479525 ACSBG1Q96GR2 724 aa24.38■■□□□ 1.49
ECHDC1-216ENST00000479525 ANKRD36BQ8N2N9 1353 aa24.38■■□□□ 1.49
ECHDC1-216ENST00000479525 EXOC5O00471 708 aa24.37■■□□□ 1.49
ECHDC1-216ENST00000479525 COG3Q96JB2 828 aa24.37■■□□□ 1.49
ECHDC1-216ENST00000479525 GGNBP2Q9H3C7 697 aa24.37■■□□□ 1.49
ECHDC1-216ENST00000479525 PARD3Q8TEW0 1356 aa24.37■■□□□ 1.49
ECHDC1-216ENST00000479525 RGPD3A6NKT7 1758 aaPredicted RBP24.36■■□□□ 1.49
ECHDC1-216ENST00000479525 RGPD4Q7Z3J3 1758 aa24.36■■□□□ 1.49
ECHDC1-216ENST00000479525 NINLQ9Y2I6 1382 aa24.36■■□□□ 1.49
ECHDC1-216ENST00000479525 MAP3K19Q56UN5 1328 aa24.35■■□□□ 1.49
ECHDC1-216ENST00000479525 KCNQ2O43526 872 aa24.35■■□□□ 1.49
ECHDC1-216ENST00000479525 CDCA7Q9BWT1 371 aaPredicted RBP24.35■■□□□ 1.49
ECHDC1-216ENST00000479525 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
ECHDC1-216ENST00000479525 FAM208AQ9UK61 1670 aaKnown RBP24.34■■□□□ 1.49
ECHDC1-216ENST00000479525 RRS1Q15050 365 aaKnown RBP24.34■■□□□ 1.49
ECHDC1-216ENST00000479525 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
ECHDC1-216ENST00000479525 IL2RBP14784 551 aa24.32■■□□□ 1.48
ECHDC1-216ENST00000479525 IP6K1Q92551 441 aa24.32■■□□□ 1.48
ECHDC1-216ENST00000479525 POLR3GLQ9BT43 218 aa24.32■■□□□ 1.48
ECHDC1-216ENST00000479525 BCL11BQ9C0K0 894 aaPredicted RBP24.32■■□□□ 1.48
ECHDC1-216ENST00000479525 BTAF1O14981 1849 aa24.32■■□□□ 1.48
ECHDC1-216ENST00000479525 AMPHP49418 695 aa24.31■■□□□ 1.48
ECHDC1-216ENST00000479525 HOXC9P31274 260 aa24.3■■□□□ 1.48
ECHDC1-216ENST00000479525 NBPF14Q5TI25 921 aa24.3■■□□□ 1.48
ECHDC1-216ENST00000479525 SHANK3Q9BYB0 1731 aa24.3■■□□□ 1.48
ECHDC1-216ENST00000479525 FYB1O15117 783 aa24.29■■□□□ 1.48
ECHDC1-216ENST00000479525 PROM2Q8N271 834 aa24.29■■□□□ 1.48
ECHDC1-216ENST00000479525 USHBP1Q8N6Y0 703 aa24.28■■□□□ 1.48
ECHDC1-216ENST00000479525 C11orf95C9JLR9 678 aaPredicted RBP24.27■■□□□ 1.48
ECHDC1-216ENST00000479525 PLSCR1O15162 318 aa24.27■■□□□ 1.48
ECHDC1-216ENST00000479525 PDGFDQ9GZP0 370 aaPredicted RBP24.27■■□□□ 1.48
ECHDC1-216ENST00000479525 DOT1LQ8TEK3 1739 aa24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 BCL9O00512 1426 aa24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 NSD3Q9BZ95 1437 aa24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 DDX54Q8TDD1 881 aaKnown RBP24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 CARD14Q9BXL6 1004 aa24.26■■□□□ 1.47
ECHDC1-216ENST00000479525 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
ECHDC1-216ENST00000479525 SLC24A1O60721 1099 aa24.24■■□□□ 1.47
ECHDC1-216ENST00000479525 MEGF6O75095 1541 aa24.23■■□□□ 1.47
ECHDC1-216ENST00000479525 TXNRD1Q16881 649 aa24.23■■□□□ 1.47
ECHDC1-216ENST00000479525 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
ECHDC1-216ENST00000479525 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.46
ECHDC1-216ENST00000479525 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
ECHDC1-216ENST00000479525 HSP90AB2PQ58FF8 381 aa24.19■■□□□ 1.46
ECHDC1-216ENST00000479525 NBPF6Q5VWK0 638 aa24.19■■□□□ 1.46
ECHDC1-216ENST00000479525 NBPF4Q96M43 638 aa24.19■■□□□ 1.46
ECHDC1-216ENST00000479525 EMILIN1Q9Y6C2 1016 aa24.18■■□□□ 1.46
ECHDC1-216ENST00000479525 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
ECHDC1-216ENST00000479525 RTL1A6NKG5 1358 aa24.17■■□□□ 1.46
ECHDC1-216ENST00000479525 ZBTB7AO95365 584 aa24.16■■□□□ 1.46
ECHDC1-216ENST00000479525 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
ECHDC1-216ENST00000479525 SYTL4Q96C24 671 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms