RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 COG3Q96JB2 828 aa28.77■■■□□ 2.2
PKP4-209ENST00000479398 FYB1O15117 783 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 TCP11L2Q8N4U5 519 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 POLR3GLQ9BT43 218 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 CARD14Q9BXL6 1004 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 OVOS2A0A0J9YW53 1432 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 OVOS2Q6IE36 1432 aa28.76■■■□□ 2.19
PKP4-209ENST00000479398 THRAP3Q9Y2W1 955 aaKnown RBP28.75■■■□□ 2.19
PKP4-209ENST00000479398 RGPD5Q99666 1765 aa28.73■■■□□ 2.19
PKP4-209ENST00000479398 CRB1P82279 1406 aa28.72■■■□□ 2.19
PKP4-209ENST00000479398 TOM1L2Q6ZVM7 507 aa28.72■■■□□ 2.19
PKP4-209ENST00000479398 CCDC125Q86Z20 511 aa28.72■■■□□ 2.19
PKP4-209ENST00000479398 MYOM1P52179 1685 aa28.72■■■□□ 2.19
PKP4-209ENST00000479398 WDR17Q8IZU2 1322 aa28.71■■■□□ 2.19
PKP4-209ENST00000479398 GGNBP2Q9H3C7 697 aa28.71■■■□□ 2.19
PKP4-209ENST00000479398 C11orf95C9JLR9 678 aaPredicted RBP28.7■■■□□ 2.18
PKP4-209ENST00000479398 THSD7AQ9UPZ6 1657 aa28.7■■■□□ 2.18
PKP4-209ENST00000479398 CSB-PGBD3P0DP91 1061 aa28.68■■■□□ 2.18
PKP4-209ENST00000479398 LTN1O94822 1766 aa28.67■■■□□ 2.18
PKP4-209ENST00000479398 ABCC6O95255 1503 aa28.66■■■□□ 2.18
PKP4-209ENST00000479398 FBLN1P23142 703 aa28.66■■■□□ 2.18
PKP4-209ENST00000479398 IP6K1Q92551 441 aa28.65■■■□□ 2.18
PKP4-209ENST00000479398 CARD10Q9BWT7 1032 aa28.65■■■□□ 2.18
PKP4-209ENST00000479398 EP400Q96L91 3159 aa28.65■■■□□ 2.18
PKP4-209ENST00000479398 NSD3Q9BZ95 1437 aa28.64■■■□□ 2.18
PKP4-209ENST00000479398 FAM182BQ5T319 152 aa28.64■■■□□ 2.18
PKP4-209ENST00000479398 PDE3BQ13370 1112 aa28.62■■■□□ 2.17
PKP4-209ENST00000479398 MAP3K19Q56UN5 1328 aa28.62■■■□□ 2.17
PKP4-209ENST00000479398 PANK3Q9H999 370 aa28.61■■■□□ 2.17
PKP4-209ENST00000479398 ANKRD24Q8TF21 1146 aa28.6■■■□□ 2.17
PKP4-209ENST00000479398 ERBB3P21860 1342 aa28.6■■■□□ 2.17
PKP4-209ENST00000479398 BLMP54132 1417 aaPredicted RBP28.6■■■□□ 2.17
PKP4-209ENST00000479398 KIF20BQ96Q89 1820 aa28.59■■■□□ 2.17
PKP4-209ENST00000479398 AMPHP49418 695 aa28.59■■■□□ 2.17
PKP4-209ENST00000479398 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
PKP4-209ENST00000479398 CGNL1Q0VF96 1302 aa28.58■■■□□ 2.17
PKP4-209ENST00000479398 HOXC9P31274 260 aa28.57■■■□□ 2.16
PKP4-209ENST00000479398 SF3B2Q13435 895 aaKnown RBP28.57■■■□□ 2.16
PKP4-209ENST00000479398 FAM196AQ6ZSG2 479 aa28.57■■■□□ 2.16
PKP4-209ENST00000479398 NLRP2Q9NX02 1062 aa28.57■■■□□ 2.16
PKP4-209ENST00000479398 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
PKP4-209ENST00000479398 CCDC7Q96M83 1385 aa28.55■■■□□ 2.16
PKP4-209ENST00000479398 PARP4Q9UKK3 1724 aaKnown RBP28.55■■■□□ 2.16
PKP4-209ENST00000479398 KIF7Q2M1P5 1343 aa28.54■■■□□ 2.16
PKP4-209ENST00000479398 DDB1Q16531 1140 aa28.54■■■□□ 2.16
PKP4-209ENST00000479398 LTV1Q96GA3 475 aaPredicted RBP28.54■■■□□ 2.16
PKP4-209ENST00000479398 DEFB132Q7Z7B7 95 aa28.5■■■□□ 2.15
PKP4-209ENST00000479398 EXOC5O00471 708 aa28.49■■■□□ 2.15
PKP4-209ENST00000479398 DISP2A7MBM2 1401 aa28.48■■■□□ 2.15
PKP4-209ENST00000479398 RTL1A6NKG5 1358 aa28.48■■■□□ 2.15
PKP4-209ENST00000479398 TRIM37O94972 964 aa28.47■■■□□ 2.15
PKP4-209ENST00000479398 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
PKP4-209ENST00000479398 KIF24Q5T7B8 1368 aa28.46■■■□□ 2.15
PKP4-209ENST00000479398 IL2RBP14784 551 aa28.45■■■□□ 2.14
PKP4-209ENST00000479398 BAG6P46379 1132 aa28.45■■■□□ 2.14
PKP4-209ENST00000479398 HSP90AB2PQ58FF8 381 aa28.45■■■□□ 2.14
PKP4-209ENST00000479398 LRRC37A3O60309 1634 aa28.44■■■□□ 2.14
PKP4-209ENST00000479398 MARCH10Q8NA82 808 aaPredicted RBP28.44■■■□□ 2.14
PKP4-209ENST00000479398 KNSTRNQ9Y448 316 aa28.44■■■□□ 2.14
PKP4-209ENST00000479398 EMILIN1Q9Y6C2 1016 aa28.43■■■□□ 2.14
PKP4-209ENST00000479398 MAP2P11137 1827 aaKnown RBP28.43■■■□□ 2.14
PKP4-209ENST00000479398 INSRP06213 1382 aa28.42■■■□□ 2.14
PKP4-209ENST00000479398 FLT4P35916 1363 aa28.42■■■□□ 2.14
PKP4-209ENST00000479398 RGPD1P0DJD0 1748 aa28.42■■■□□ 2.14
PKP4-209ENST00000479398 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
PKP4-209ENST00000479398 PPM1GO15355 546 aaPredicted RBP28.4■■■□□ 2.14
PKP4-209ENST00000479398 NBPF6Q5VWK0 638 aa28.4■■■□□ 2.14
PKP4-209ENST00000479398 NBPF4Q96M43 638 aa28.4■■■□□ 2.14
PKP4-209ENST00000479398 POLKQ9UBT6 870 aa28.4■■■□□ 2.14
PKP4-209ENST00000479398 PEAK1Q9H792 1746 aa28.4■■■□□ 2.14
PKP4-209ENST00000479398 NSD2O96028 1365 aa28.39■■■□□ 2.14
PKP4-209ENST00000479398 OVOS2A0A0G2JMS6 1433 aa28.39■■■□□ 2.14
PKP4-209ENST00000479398 TNNT2P45379 298 aaPredicted RBP28.39■■■□□ 2.14
PKP4-209ENST00000479398 EN1Q05925 392 aaPredicted RBP28.39■■■□□ 2.14
PKP4-209ENST00000479398 ANKRD26Q9UPS8 1709 aa28.39■■■□□ 2.14
PKP4-209ENST00000479398 RGPD2P0DJD1 1756 aa28.39■■■□□ 2.13
PKP4-209ENST00000479398 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.13
PKP4-209ENST00000479398 APBA3O96018 575 aa28.37■■■□□ 2.13
PKP4-209ENST00000479398 SMG6Q86US8 1419 aaKnown RBP28.36■■■□□ 2.13
PKP4-209ENST00000479398 PER1O15534 1290 aaPredicted RBP28.36■■■□□ 2.13
PKP4-209ENST00000479398 MORC1Q86VD1 984 aa28.36■■■□□ 2.13
PKP4-209ENST00000479398 AMER1Q5JTC6 1135 aaPredicted RBP28.35■■■□□ 2.13
PKP4-209ENST00000479398 TNS1Q9HBL0 1735 aaKnown RBP28.35■■■□□ 2.13
PKP4-209ENST00000479398 TNS2Q63HR2 1409 aa28.35■■■□□ 2.13
PKP4-209ENST00000479398 BCL9O00512 1426 aa28.34■■■□□ 2.13
PKP4-209ENST00000479398 SBF2Q86WG5 1849 aa28.32■■■□□ 2.12
PKP4-209ENST00000479398 USHBP1Q8N6Y0 703 aa28.32■■■□□ 2.12
PKP4-209ENST00000479398 CAMKK2Q96RR4 588 aa28.32■■■□□ 2.12
PKP4-209ENST00000479398 EZH2Q15910 746 aaKnown RBP28.31■■■□□ 2.12
PKP4-209ENST00000479398 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
PKP4-209ENST00000479398 ZCRB1Q8TBF4 217 aaKnown RBP28.28■■■□□ 2.12
PKP4-209ENST00000479398 DDX54Q8TDD1 881 aaKnown RBP28.28■■■□□ 2.12
PKP4-209ENST00000479398 PTF1AQ7RTS3 328 aa28.27■■■□□ 2.12
PKP4-209ENST00000479398 RAPGEF4Q8WZA2 1011 aa28.27■■■□□ 2.12
PKP4-209ENST00000479398 EYA1Q99502 592 aa28.25■■■□□ 2.11
PKP4-209ENST00000479398 PLSCR1O15162 318 aa28.24■■■□□ 2.11
PKP4-209ENST00000479398 TATP17735 454 aaPredicted RBP28.24■■■□□ 2.11
PKP4-209ENST00000479398 PARD3Q8TEW0 1356 aa28.24■■■□□ 2.11
PKP4-209ENST00000479398 KAT6BQ8WYB5 2073 aa28.23■■■□□ 2.11
PKP4-209ENST00000479398 MEGF6O75095 1541 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms