RNA–Protein interactions for RNA: ENST00000479353.5

PTGER3-210, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,895 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-210ENST00000479353 CCDC136Q96JN2 1154 aa27.13■■□□□ 1.93
PTGER3-210ENST00000479353 KIF1AQ12756 1690 aa27.12■■□□□ 1.93
PTGER3-210ENST00000479353 TRPM3Q9HCF6 1732 aaPredicted RBP27.12■■□□□ 1.93
PTGER3-210ENST00000479353 LTN1O94822 1766 aa27.12■■□□□ 1.93
PTGER3-210ENST00000479353 NUTM2GQ5VZR2 741 aa27.12■■□□□ 1.93
PTGER3-210ENST00000479353 TSHZ2Q9NRE2 1034 aa27.12■■□□□ 1.93
PTGER3-210ENST00000479353 FANCIQ9NVI1 1328 aa27.12■■□□□ 1.93
PTGER3-210ENST00000479353 ABTB2Q8N961 1025 aa27.11■■□□□ 1.93
PTGER3-210ENST00000479353 ORAI2Q96SN7 254 aa27.11■■□□□ 1.93
PTGER3-210ENST00000479353 AEBP1Q8IUX7 1158 aa27.1■■□□□ 1.93
PTGER3-210ENST00000479353 C1orf167Q5SNV9 1468 aa27.1■■□□□ 1.93
PTGER3-210ENST00000479353 PAK3O75914 559 aaPredicted RBP27.1■■□□□ 1.93
PTGER3-210ENST00000479353 NFAT5O94916 1531 aa27.1■■□□□ 1.93
PTGER3-210ENST00000479353 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.09■■□□□ 1.93
PTGER3-210ENST00000479353 XIRP1Q702N8 1843 aaKnown RBP27.09■■□□□ 1.93
PTGER3-210ENST00000479353 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
PTGER3-210ENST00000479353 NEFMP07197 916 aa27.08■■□□□ 1.93
PTGER3-210ENST00000479353 TSR2Q969E8 191 aaKnown RBP27.08■■□□□ 1.93
PTGER3-210ENST00000479353 C19orf44Q9H6X5 657 aa27.08■■□□□ 1.93
PTGER3-210ENST00000479353 KIF24Q5T7B8 1368 aa27.08■■□□□ 1.92
PTGER3-210ENST00000479353 RARSP54136 660 aaKnown RBP27.07■■□□□ 1.92
PTGER3-210ENST00000479353 ARHGEF10O15013 1369 aa27.07■■□□□ 1.92
PTGER3-210ENST00000479353 SULT6B1Q6IMI4 303 aa27.06■■□□□ 1.92
PTGER3-210ENST00000479353 NCOA3Q9Y6Q9 1424 aa27.06■■□□□ 1.92
PTGER3-210ENST00000479353 DCCP43146 1447 aa27.05■■□□□ 1.92
PTGER3-210ENST00000479353 MST1RQ04912 1400 aa27.05■■□□□ 1.92
PTGER3-210ENST00000479353 PSME1Q06323 249 aa27.05■■□□□ 1.92
PTGER3-210ENST00000479353 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
PTGER3-210ENST00000479353 AMPHP49418 695 aa27.03■■□□□ 1.92
PTGER3-210ENST00000479353 KDRP35968 1356 aa27.02■■□□□ 1.92
PTGER3-210ENST00000479353 FOXO3O43524 673 aa27.02■■□□□ 1.92
PTGER3-210ENST00000479353 HOXC9P31274 260 aa27.02■■□□□ 1.92
PTGER3-210ENST00000479353 EXOSC9Q06265 439 aaKnown RBP27.01■■□□□ 1.91
PTGER3-210ENST00000479353 SLIT3O75094 1523 aa27■■□□□ 1.91
PTGER3-210ENST00000479353 CT47B1P0C2W7 299 aaPredicted RBP27■■□□□ 1.91
PTGER3-210ENST00000479353 THUMPD2Q9BTF0 503 aaKnown RBP27■■□□□ 1.91
PTGER3-210ENST00000479353 RTL1A6NKG5 1358 aa27■■□□□ 1.91
PTGER3-210ENST00000479353 IGSF1Q8N6C5 1336 aa27■■□□□ 1.91
PTGER3-210ENST00000479353 ALS2Q96Q42 1657 aa26.99■■□□□ 1.91
PTGER3-210ENST00000479353 XPCQ01831 940 aaPredicted RBP26.98■■□□□ 1.91
PTGER3-210ENST00000479353 EYA1Q99502 592 aa26.97■■□□□ 1.91
PTGER3-210ENST00000479353 LMOD3Q0VAK6 560 aa26.96■■□□□ 1.91
PTGER3-210ENST00000479353 PDE3AQ14432 1141 aa26.96■■□□□ 1.91
PTGER3-210ENST00000479353 ZNF853P0CG23 659 aa26.95■■□□□ 1.9
PTGER3-210ENST00000479353 BCL2L13Q9BXK5 485 aa26.95■■□□□ 1.9
PTGER3-210ENST00000479353 FAM83GA6ND36 823 aa26.94■■□□□ 1.9
PTGER3-210ENST00000479353 ATF3P18847 181 aa26.94■■□□□ 1.9
PTGER3-210ENST00000479353 CALD1Q05682 793 aaKnown RBP26.93■■□□□ 1.9
PTGER3-210ENST00000479353 IFT57Q9NWB7 429 aa26.93■■□□□ 1.9
PTGER3-210ENST00000479353 KRT28Q7Z3Y7 464 aa26.92■■□□□ 1.9
PTGER3-210ENST00000479353 USP19O94966 1318 aa26.92■■□□□ 1.9
PTGER3-210ENST00000479353 RGPD2P0DJD1 1756 aa26.91■■□□□ 1.9
PTGER3-210ENST00000479353 KCNH5Q8NCM2 988 aa26.91■■□□□ 1.9
PTGER3-210ENST00000479353 DCTN1Q14203 1278 aa26.9■■□□□ 1.9
PTGER3-210ENST00000479353 IP6K1Q92551 441 aa26.9■■□□□ 1.9
PTGER3-210ENST00000479353 FRAT1Q92837 279 aaPredicted RBP26.9■■□□□ 1.9
PTGER3-210ENST00000479353 GNAI1P63096 354 aa26.89■■□□□ 1.9
PTGER3-210ENST00000479353 PANK1Q8TE04 598 aa26.89■■□□□ 1.9
PTGER3-210ENST00000479353 TNNQ9UQP3 1299 aa26.89■■□□□ 1.9
PTGER3-210ENST00000479353 CANXP27824 592 aaKnown RBP26.88■■□□□ 1.89
PTGER3-210ENST00000479353 SSH1Q8WYL5 1049 aa26.88■■□□□ 1.89
PTGER3-210ENST00000479353 LAS1LQ9Y4W2 734 aaKnown RBP26.88■■□□□ 1.89
PTGER3-210ENST00000479353 MSH6P52701 1360 aa26.88■■□□□ 1.89
PTGER3-210ENST00000479353 MED1Q15648 1581 aaPredicted RBP26.88■■□□□ 1.89
PTGER3-210ENST00000479353 CADPS2Q86UW7 1296 aa26.87■■□□□ 1.89
PTGER3-210ENST00000479353 CFAP44Q96MT7 982 aa26.87■■□□□ 1.89
PTGER3-210ENST00000479353 MBIPQ9NS73 344 aa26.87■■□□□ 1.89
PTGER3-210ENST00000479353 RLBP1P12271 317 aa26.86■■□□□ 1.89
PTGER3-210ENST00000479353 GCP02774 474 aa26.85■■□□□ 1.89
PTGER3-210ENST00000479353 MTHFSDQ2M296 383 aaKnown RBP26.85■■□□□ 1.89
PTGER3-210ENST00000479353 LRRC37A3O60309 1634 aa26.85■■□□□ 1.89
PTGER3-210ENST00000479353 KDM2BQ8NHM5 1336 aa26.85■■□□□ 1.89
PTGER3-210ENST00000479353 SMC4Q9NTJ3 1288 aa26.85■■□□□ 1.89
PTGER3-210ENST00000479353 ARHGEF25Q86VW2 580 aa26.84■■□□□ 1.89
PTGER3-210ENST00000479353 LTV1Q96GA3 475 aaPredicted RBP26.84■■□□□ 1.89
PTGER3-210ENST00000479353 DDX17Q92841 729 aaKnown RBP26.83■■□□□ 1.89
PTGER3-210ENST00000479353 COG6Q9Y2V7 657 aa26.83■■□□□ 1.89
PTGER3-210ENST00000479353 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
PTGER3-210ENST00000479353 PXDNQ92626 1479 aa26.83■■□□□ 1.89
PTGER3-210ENST00000479353 RGPD5Q99666 1765 aa26.83■■□□□ 1.88
PTGER3-210ENST00000479353 CRB1P82279 1406 aa26.83■■□□□ 1.88
PTGER3-210ENST00000479353 CRYBG1Q9Y4K1 1723 aa26.82■■□□□ 1.88
PTGER3-210ENST00000479353 MCM10Q7L590 875 aa26.82■■□□□ 1.88
PTGER3-210ENST00000479353 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
PTGER3-210ENST00000479353 ALDH1L2Q3SY69 923 aa26.81■■□□□ 1.88
PTGER3-210ENST00000479353 ZKSCAN2Q63HK3 967 aa26.81■■□□□ 1.88
PTGER3-210ENST00000479353 LMOD2Q6P5Q4 547 aa26.81■■□□□ 1.88
PTGER3-210ENST00000479353 TSPYL6Q8N831 410 aa26.81■■□□□ 1.88
PTGER3-210ENST00000479353 VAMP4O75379 141 aa26.8■■□□□ 1.88
PTGER3-210ENST00000479353 ZNF428Q96B54 188 aa26.79■■□□□ 1.88
PTGER3-210ENST00000479353 GAS2L2Q8NHY3 880 aa26.78■■□□□ 1.88
PTGER3-210ENST00000479353 NCAPD2Q15021 1401 aa26.78■■□□□ 1.88
PTGER3-210ENST00000479353 NPHP3Q7Z494 1330 aa26.78■■□□□ 1.88
PTGER3-210ENST00000479353 CHL1O00533 1208 aa26.77■■□□□ 1.88
PTGER3-210ENST00000479353 NBPF6Q5VWK0 638 aa26.77■■□□□ 1.88
PTGER3-210ENST00000479353 USHBP1Q8N6Y0 703 aa26.77■■□□□ 1.88
PTGER3-210ENST00000479353 NBPF4Q96M43 638 aa26.77■■□□□ 1.88
PTGER3-210ENST00000479353 BRPF1P55201 1214 aaPredicted RBP26.76■■□□□ 1.88
PTGER3-210ENST00000479353 C8orf58Q8NAV2 365 aa26.76■■□□□ 1.88
PTGER3-210ENST00000479353 CLUAP1Q96AJ1 413 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms