RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 JAKMIP3Q5VZ66 844 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 TDO2P48775 406 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
EWSR1-216ENST00000479135 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
EWSR1-216ENST00000479135 CCDC174Q6PII3 467 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 PPP1R14CQ8TAE6 165 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 BICDL2A1A5D9 508 aa12.93□□□□□ -0.34
EWSR1-216ENST00000479135 KIF5CO60282 957 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
EWSR1-216ENST00000479135 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 FIBPO43427 364 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 PPARDQ03181 441 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 TAF4BQ92750 862 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 LIG1P18858 919 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 NUTM2DQ5VT03 806 aaPredicted RBP12.92□□□□□ -0.34
EWSR1-216ENST00000479135 TRMT1LQ7Z2T5 733 aaKnown RBP12.92□□□□□ -0.34
EWSR1-216ENST00000479135 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
EWSR1-216ENST00000479135 LMAN1P49257 510 aa12.91□□□□□ -0.34
EWSR1-216ENST00000479135 SPECC1Q5M775 1068 aa12.91□□□□□ -0.34
EWSR1-216ENST00000479135 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 PABPN1LA6NDY0 278 aaKnown RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 TMF1P82094 1093 aa12.91□□□□□ -0.34
EWSR1-216ENST00000479135 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
EWSR1-216ENST00000479135 MRE11P49959 708 aa12.91□□□□□ -0.34
EWSR1-216ENST00000479135 EPB41L2O43491 1005 aaKnown RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 KINO60870 393 aaKnown RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
EWSR1-216ENST00000479135 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 SETDB1Q15047 1291 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
EWSR1-216ENST00000479135 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
EWSR1-216ENST00000479135 ZCRB1Q8TBF4 217 aaKnown RBP12.9□□□□□ -0.34
EWSR1-216ENST00000479135 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 CCDC170Q8IYT3 715 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 EPSTI1Q96J88 318 aa12.9□□□□□ -0.34
EWSR1-216ENST00000479135 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
EWSR1-216ENST00000479135 CHMP2AO43633 222 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
EWSR1-216ENST00000479135 MAATS1Q7Z4T9 603 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 PRR16Q569H4 304 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
EWSR1-216ENST00000479135 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
EWSR1-216ENST00000479135 CASQ1P31415 396 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 VPS41P49754 854 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 HOOK3Q86VS8 718 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
EWSR1-216ENST00000479135 CTNNA2P26232 953 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 PRPF4BQ13523 1007 aaKnown RBP12.88□□□□□ -0.35
EWSR1-216ENST00000479135 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 DHX8Q14562 1220 aaKnown RBP12.88□□□□□ -0.35
EWSR1-216ENST00000479135 PSMD6Q15008 389 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
EWSR1-216ENST00000479135 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
EWSR1-216ENST00000479135 ANLNQ9NQW6 1124 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 DESP17661 470 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
EWSR1-216ENST00000479135 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
EWSR1-216ENST00000479135 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
EWSR1-216ENST00000479135 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
EWSR1-216ENST00000479135 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
EWSR1-216ENST00000479135 EVA1CP58658 441 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
EWSR1-216ENST00000479135 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
EWSR1-216ENST00000479135 AMPHP49418 695 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
EWSR1-216ENST00000479135 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 TRAK2O60296 914 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 XBP1P17861 261 aa12.86□□□□□ -0.35
EWSR1-216ENST00000479135 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
EWSR1-216ENST00000479135 BAG1Q99933 345 aaPredicted RBP12.85□□□□□ -0.35
EWSR1-216ENST00000479135 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 RSPH14Q9UHP6 348 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 IQCEQ6IPM2 695 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
EWSR1-216ENST00000479135 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
EWSR1-216ENST00000479135 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms