RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SPATA31A5Q5VU36 1347 aa28.14■■■□□ 2.09
VARS-224ENST00000479051 SPATA31A7Q8IWB4 1347 aa28.14■■■□□ 2.09
VARS-224ENST00000479051 SOCS7O14512 581 aa28.13■■■□□ 2.09
VARS-224ENST00000479051 WASHC2AQ641Q2 1341 aa28.13■■■□□ 2.09
VARS-224ENST00000479051 COL18A1P39060 1754 aa28.12■■■□□ 2.09
VARS-224ENST00000479051 KNSTRNQ9Y448 316 aa28.12■■■□□ 2.09
VARS-224ENST00000479051 LTN1O94822 1766 aa28.11■■■□□ 2.09
VARS-224ENST00000479051 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
VARS-224ENST00000479051 SPATA31A1Q5TZJ5 1347 aa28.1■■■□□ 2.09
VARS-224ENST00000479051 A0A0G2JS52 829 aa28.09■■■□□ 2.09
VARS-224ENST00000479051 MYT1Q01538 1121 aa28.09■■■□□ 2.09
VARS-224ENST00000479051 AXIN2Q9Y2T1 843 aa28.09■■■□□ 2.09
VARS-224ENST00000479051 NSD2O96028 1365 aa28.09■■■□□ 2.09
VARS-224ENST00000479051 CSB-PGBD3P0DP91 1061 aa28.08■■■□□ 2.09
VARS-224ENST00000479051 AMPHP49418 695 aa28.07■■■□□ 2.08
VARS-224ENST00000479051 FAM98CQ17RN3 349 aaKnown RBP28.07■■■□□ 2.08
VARS-224ENST00000479051 USP35Q9P2H5 1018 aa28.07■■■□□ 2.08
VARS-224ENST00000479051 WDR17Q8IZU2 1322 aa28.07■■■□□ 2.08
VARS-224ENST00000479051 CRB1P82279 1406 aa28.07■■■□□ 2.08
VARS-224ENST00000479051 ONECUT3O60422 494 aaPredicted RBP28.06■■■□□ 2.08
VARS-224ENST00000479051 TOM1L2Q6ZVM7 507 aa28.06■■■□□ 2.08
VARS-224ENST00000479051 MAP3K19Q56UN5 1328 aa28.06■■■□□ 2.08
VARS-224ENST00000479051 BLMP54132 1417 aaPredicted RBP28.05■■■□□ 2.08
VARS-224ENST00000479051 IP6K1Q92551 441 aa28.05■■■□□ 2.08
VARS-224ENST00000479051 RTL1A6NKG5 1358 aa28.04■■■□□ 2.08
VARS-224ENST00000479051 SEPT12Q8IYM1 358 aa28.04■■■□□ 2.08
VARS-224ENST00000479051 TCP11L2Q8N4U5 519 aa28.04■■■□□ 2.08
VARS-224ENST00000479051 THRAP3Q9Y2W1 955 aaKnown RBP28.04■■■□□ 2.08
VARS-224ENST00000479051 RGPD5Q99666 1765 aa28.04■■■□□ 2.08
VARS-224ENST00000479051 ANKRD26Q9UPS8 1709 aa28.04■■■□□ 2.08
VARS-224ENST00000479051 RRS1Q15050 365 aaKnown RBP28.02■■■□□ 2.08
VARS-224ENST00000479051 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
VARS-224ENST00000479051 ERBB3P21860 1342 aa28.01■■■□□ 2.07
VARS-224ENST00000479051 FBLN1P23142 703 aa28.01■■■□□ 2.07
VARS-224ENST00000479051 HOXC9P31274 260 aa28■■■□□ 2.07
VARS-224ENST00000479051 KIF24Q5T7B8 1368 aa27.99■■■□□ 2.07
VARS-224ENST00000479051 ANKRD24Q8TF21 1146 aa27.99■■■□□ 2.07
VARS-224ENST00000479051 MORC1Q86VD1 984 aa27.98■■■□□ 2.07
VARS-224ENST00000479051 CARD10Q9BWT7 1032 aa27.98■■■□□ 2.07
VARS-224ENST00000479051 FLT4P35916 1363 aa27.97■■■□□ 2.07
VARS-224ENST00000479051 AMER1Q5JTC6 1135 aaPredicted RBP27.96■■■□□ 2.07
VARS-224ENST00000479051 NLRP2Q9NX02 1062 aa27.96■■■□□ 2.07
VARS-224ENST00000479051 THSD7AQ9UPZ6 1657 aa27.96■■■□□ 2.07
VARS-224ENST00000479051 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
VARS-224ENST00000479051 KRT27Q7Z3Y8 459 aa27.95■■■□□ 2.06
VARS-224ENST00000479051 LTV1Q96GA3 475 aaPredicted RBP27.95■■■□□ 2.06
VARS-224ENST00000479051 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
VARS-224ENST00000479051 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
VARS-224ENST00000479051 PPM1GO15355 546 aaPredicted RBP27.93■■■□□ 2.06
VARS-224ENST00000479051 CDCA7Q9BWT1 371 aaPredicted RBP27.93■■■□□ 2.06
VARS-224ENST00000479051 FAM208AQ9UK61 1670 aaKnown RBP27.92■■■□□ 2.06
VARS-224ENST00000479051 EMILIN1Q9Y6C2 1016 aa27.92■■■□□ 2.06
VARS-224ENST00000479051 BRWD3Q6RI45 1802 aa27.92■■■□□ 2.06
VARS-224ENST00000479051 INSRP06213 1382 aa27.91■■■□□ 2.06
VARS-224ENST00000479051 NPC1L1Q9UHC9 1359 aa27.89■■■□□ 2.06
VARS-224ENST00000479051 POLKQ9UBT6 870 aa27.89■■■□□ 2.06
VARS-224ENST00000479051 MAP2P11137 1827 aaKnown RBP27.89■■■□□ 2.06
VARS-224ENST00000479051 PDE3BQ13370 1112 aa27.88■■■□□ 2.05
VARS-224ENST00000479051 HSP90AB2PQ58FF8 381 aa27.88■■■□□ 2.05
VARS-224ENST00000479051 CC2D1BQ5T0F9 858 aaKnown RBP27.88■■■□□ 2.05
VARS-224ENST00000479051 PEAK1Q9H792 1746 aa27.88■■■□□ 2.05
VARS-224ENST00000479051 PARP4Q9UKK3 1724 aaKnown RBP27.86■■■□□ 2.05
VARS-224ENST00000479051 UPF1Q92900 1129 aaKnown RBP eCLIP27.85■■■□□ 2.05
VARS-224ENST00000479051 WNK3Q9BYP7 1800 aa27.85■■■□□ 2.05
VARS-224ENST00000479051 DDB1Q16531 1140 aa27.84■■■□□ 2.05
VARS-224ENST00000479051 IL2RBP14784 551 aa27.83■■■□□ 2.05
VARS-224ENST00000479051 DISP2A7MBM2 1401 aa27.82■■■□□ 2.04
VARS-224ENST00000479051 CNGB1Q14028 1251 aaPredicted RBP27.8■■■□□ 2.04
VARS-224ENST00000479051 LRRC37A3O60309 1634 aa27.79■■■□□ 2.04
VARS-224ENST00000479051 EXOC5O00471 708 aa27.79■■■□□ 2.04
VARS-224ENST00000479051 CCDC125Q86Z20 511 aa27.79■■■□□ 2.04
VARS-224ENST00000479051 NBPF6Q5VWK0 638 aa27.78■■■□□ 2.04
VARS-224ENST00000479051 NBPF4Q96M43 638 aa27.78■■■□□ 2.04
VARS-224ENST00000479051 FAM196AQ6ZSG2 479 aa27.77■■■□□ 2.04
VARS-224ENST00000479051 FAM182BQ5T319 152 aa27.75■■■□□ 2.03
VARS-224ENST00000479051 RGPD2P0DJD1 1756 aa27.75■■■□□ 2.03
VARS-224ENST00000479051 TNS2Q63HR2 1409 aa27.75■■■□□ 2.03
VARS-224ENST00000479051 SF3B2Q13435 895 aaKnown RBP27.74■■■□□ 2.03
VARS-224ENST00000479051 RAPGEF4Q8WZA2 1011 aa27.74■■■□□ 2.03
VARS-224ENST00000479051 DDX10Q13206 875 aaKnown RBP27.73■■■□□ 2.03
VARS-224ENST00000479051 OVOS2A0A0G2JMS6 1433 aa27.73■■■□□ 2.03
VARS-224ENST00000479051 MTHFSP49914 203 aa27.72■■■□□ 2.03
VARS-224ENST00000479051 EIF4A2Q14240 407 aaKnown RBP27.72■■■□□ 2.03
VARS-224ENST00000479051 USHBP1Q8N6Y0 703 aa27.72■■■□□ 2.03
VARS-224ENST00000479051 TATP17735 454 aaPredicted RBP27.69■■■□□ 2.02
VARS-224ENST00000479051 EP400Q96L91 3159 aa27.68■■■□□ 2.02
VARS-224ENST00000479051 EYA1Q99502 592 aa27.68■■■□□ 2.02
VARS-224ENST00000479051 MARCH10Q8NA82 808 aaPredicted RBP27.67■■■□□ 2.02
VARS-224ENST00000479051 MEGF6O75095 1541 aa27.67■■■□□ 2.02
VARS-224ENST00000479051 NCAPD2Q15021 1401 aa27.66■■■□□ 2.02
VARS-224ENST00000479051 RGPD1P0DJD0 1748 aa27.64■■■□□ 2.02
VARS-224ENST00000479051 ZCRB1Q8TBF4 217 aaKnown RBP27.64■■■□□ 2.02
VARS-224ENST00000479051 IGSF1Q8N6C5 1336 aa27.64■■■□□ 2.01
VARS-224ENST00000479051 ZNF316A6NFI3 1004 aaPredicted RBP27.63■■■□□ 2.01
VARS-224ENST00000479051 TRIM37O94972 964 aa27.63■■■□□ 2.01
VARS-224ENST00000479051 BCL9O00512 1426 aa27.63■■■□□ 2.01
VARS-224ENST00000479051 DDX54Q8TDD1 881 aaKnown RBP27.62■■■□□ 2.01
VARS-224ENST00000479051 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
VARS-224ENST00000479051 BAG6P46379 1132 aa27.61■■■□□ 2.01
VARS-224ENST00000479051 DIAPH1O60610 1272 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms