RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 SOCS7O14512 581 aa28.74■■■□□ 2.19
COL19A1-203ENST00000478620 FBLN1P23142 703 aa28.74■■■□□ 2.19
COL19A1-203ENST00000478620 NFAT5O94916 1531 aa28.74■■■□□ 2.19
COL19A1-203ENST00000478620 CDK12Q9NYV4 1490 aaPredicted RBP28.73■■■□□ 2.19
COL19A1-203ENST00000478620 AMPHP49418 695 aa28.73■■■□□ 2.19
COL19A1-203ENST00000478620 FAM98CQ17RN3 349 aaKnown RBP28.73■■■□□ 2.19
COL19A1-203ENST00000478620 USP54Q70EL1 1684 aa28.71■■■□□ 2.19
COL19A1-203ENST00000478620 TOM1L2Q6ZVM7 507 aa28.71■■■□□ 2.19
COL19A1-203ENST00000478620 NRAPQ86VF7 1730 aa28.71■■■□□ 2.19
COL19A1-203ENST00000478620 SPATA31A1Q5TZJ5 1347 aa28.69■■■□□ 2.18
COL19A1-203ENST00000478620 RGS12O14924 1447 aa28.69■■■□□ 2.18
COL19A1-203ENST00000478620 RRS1Q15050 365 aaKnown RBP28.69■■■□□ 2.18
COL19A1-203ENST00000478620 SEPT12Q8IYM1 358 aa28.69■■■□□ 2.18
COL19A1-203ENST00000478620 COL5A2P05997 1499 aaPredicted RBP28.68■■■□□ 2.18
COL19A1-203ENST00000478620 IP6K1Q92551 441 aa28.68■■■□□ 2.18
COL19A1-203ENST00000478620 KIF20BQ96Q89 1820 aa28.68■■■□□ 2.18
COL19A1-203ENST00000478620 MAP3K19Q56UN5 1328 aa28.68■■■□□ 2.18
COL19A1-203ENST00000478620 LMO7Q8WWI1 1683 aa28.67■■■□□ 2.18
COL19A1-203ENST00000478620 GLI3P10071 1580 aa28.67■■■□□ 2.18
COL19A1-203ENST00000478620 ONECUT3O60422 494 aaPredicted RBP28.66■■■□□ 2.18
COL19A1-203ENST00000478620 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
COL19A1-203ENST00000478620 TCP11L2Q8N4U5 519 aa28.66■■■□□ 2.18
COL19A1-203ENST00000478620 LTV1Q96GA3 475 aaPredicted RBP28.66■■■□□ 2.18
COL19A1-203ENST00000478620 WDR17Q8IZU2 1322 aa28.66■■■□□ 2.18
COL19A1-203ENST00000478620 MORC1Q86VD1 984 aa28.65■■■□□ 2.18
COL19A1-203ENST00000478620 ANKRD24Q8TF21 1146 aa28.64■■■□□ 2.18
COL19A1-203ENST00000478620 COL18A1P39060 1754 aa28.64■■■□□ 2.18
COL19A1-203ENST00000478620 PPM1GO15355 546 aaPredicted RBP28.63■■■□□ 2.17
COL19A1-203ENST00000478620 CRB1P82279 1406 aa28.62■■■□□ 2.17
COL19A1-203ENST00000478620 HOXC9P31274 260 aa28.62■■■□□ 2.17
COL19A1-203ENST00000478620 NLRP2Q9NX02 1062 aa28.62■■■□□ 2.17
COL19A1-203ENST00000478620 THRAP3Q9Y2W1 955 aaKnown RBP28.62■■■□□ 2.17
COL19A1-203ENST00000478620 LTN1O94822 1766 aa28.61■■■□□ 2.17
COL19A1-203ENST00000478620 CNGB1Q14028 1251 aaPredicted RBP28.61■■■□□ 2.17
COL19A1-203ENST00000478620 NSD2O96028 1365 aa28.61■■■□□ 2.17
COL19A1-203ENST00000478620 BARGINQ6ZT62 677 aa28.6■■■□□ 2.17
COL19A1-203ENST00000478620 CARD10Q9BWT7 1032 aa28.59■■■□□ 2.17
COL19A1-203ENST00000478620 ABCC6O95255 1503 aa28.59■■■□□ 2.17
COL19A1-203ENST00000478620 RGPD5Q99666 1765 aa28.58■■■□□ 2.17
COL19A1-203ENST00000478620 PER1O15534 1290 aaPredicted RBP28.58■■■□□ 2.17
COL19A1-203ENST00000478620 BLMP54132 1417 aaPredicted RBP28.58■■■□□ 2.17
COL19A1-203ENST00000478620 AMER1Q5JTC6 1135 aaPredicted RBP28.57■■■□□ 2.16
COL19A1-203ENST00000478620 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
COL19A1-203ENST00000478620 KRT27Q7Z3Y8 459 aa28.57■■■□□ 2.16
COL19A1-203ENST00000478620 EMILIN1Q9Y6C2 1016 aa28.57■■■□□ 2.16
COL19A1-203ENST00000478620 ERBB3P21860 1342 aa28.57■■■□□ 2.16
COL19A1-203ENST00000478620 RTL1A6NKG5 1358 aa28.54■■■□□ 2.16
COL19A1-203ENST00000478620 HSP90AB2PQ58FF8 381 aa28.54■■■□□ 2.16
COL19A1-203ENST00000478620 PDE3BQ13370 1112 aa28.53■■■□□ 2.16
COL19A1-203ENST00000478620 POLKQ9UBT6 870 aa28.53■■■□□ 2.16
COL19A1-203ENST00000478620 FLT4P35916 1363 aa28.52■■■□□ 2.16
COL19A1-203ENST00000478620 KIF24Q5T7B8 1368 aa28.5■■■□□ 2.15
COL19A1-203ENST00000478620 CDCA7Q9BWT1 371 aaPredicted RBP28.5■■■□□ 2.15
COL19A1-203ENST00000478620 SMG6Q86US8 1419 aaKnown RBP28.49■■■□□ 2.15
COL19A1-203ENST00000478620 UPF1Q92900 1129 aaKnown RBP eCLIP28.48■■■□□ 2.15
COL19A1-203ENST00000478620 INSRP06213 1382 aa28.48■■■□□ 2.15
COL19A1-203ENST00000478620 ANKRD26Q9UPS8 1709 aa28.47■■■□□ 2.15
COL19A1-203ENST00000478620 DDB1Q16531 1140 aa28.47■■■□□ 2.15
COL19A1-203ENST00000478620 FAM182BQ5T319 152 aa28.46■■■□□ 2.15
COL19A1-203ENST00000478620 MAP2P11137 1827 aaKnown RBP28.45■■■□□ 2.14
COL19A1-203ENST00000478620 BRWD3Q6RI45 1802 aa28.45■■■□□ 2.14
COL19A1-203ENST00000478620 EXOC5O00471 708 aa28.44■■■□□ 2.14
COL19A1-203ENST00000478620 IL2RBP14784 551 aa28.44■■■□□ 2.14
COL19A1-203ENST00000478620 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
COL19A1-203ENST00000478620 THSD7AQ9UPZ6 1657 aa28.42■■■□□ 2.14
COL19A1-203ENST00000478620 NBPF6Q5VWK0 638 aa28.42■■■□□ 2.14
COL19A1-203ENST00000478620 NBPF4Q96M43 638 aa28.42■■■□□ 2.14
COL19A1-203ENST00000478620 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
COL19A1-203ENST00000478620 PEAK1Q9H792 1746 aa28.4■■■□□ 2.14
COL19A1-203ENST00000478620 USHBP1Q8N6Y0 703 aa28.4■■■□□ 2.14
COL19A1-203ENST00000478620 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
COL19A1-203ENST00000478620 MTHFSP49914 203 aa28.37■■■□□ 2.13
COL19A1-203ENST00000478620 SF3B2Q13435 895 aaKnown RBP28.37■■■□□ 2.13
COL19A1-203ENST00000478620 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
COL19A1-203ENST00000478620 RAPGEF4Q8WZA2 1011 aa28.36■■■□□ 2.13
COL19A1-203ENST00000478620 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
COL19A1-203ENST00000478620 FAM208AQ9UK61 1670 aaKnown RBP28.34■■■□□ 2.13
COL19A1-203ENST00000478620 DISP2A7MBM2 1401 aa28.34■■■□□ 2.13
COL19A1-203ENST00000478620 EYA1Q99502 592 aa28.33■■■□□ 2.13
COL19A1-203ENST00000478620 TATP17735 454 aaPredicted RBP28.32■■■□□ 2.12
COL19A1-203ENST00000478620 PARP4Q9UKK3 1724 aaKnown RBP28.32■■■□□ 2.12
COL19A1-203ENST00000478620 ZNF316A6NFI3 1004 aaPredicted RBP28.31■■■□□ 2.12
COL19A1-203ENST00000478620 MARCH10Q8NA82 808 aaPredicted RBP28.31■■■□□ 2.12
COL19A1-203ENST00000478620 DDX54Q8TDD1 881 aaKnown RBP28.3■■■□□ 2.12
COL19A1-203ENST00000478620 RGPD2P0DJD1 1756 aa28.29■■■□□ 2.12
COL19A1-203ENST00000478620 TRIM37O94972 964 aa28.28■■■□□ 2.12
COL19A1-203ENST00000478620 ZCRB1Q8TBF4 217 aaKnown RBP28.28■■■□□ 2.12
COL19A1-203ENST00000478620 WNK3Q9BYP7 1800 aa28.26■■■□□ 2.11
COL19A1-203ENST00000478620 OVOS2A0A0G2JMS6 1433 aa28.26■■■□□ 2.11
COL19A1-203ENST00000478620 LRRC37A3O60309 1634 aa28.25■■■□□ 2.11
COL19A1-203ENST00000478620 TNS2Q63HR2 1409 aa28.25■■■□□ 2.11
COL19A1-203ENST00000478620 DIAPH1O60610 1272 aaKnown RBP28.24■■■□□ 2.11
COL19A1-203ENST00000478620 CFAP53Q96M91 514 aa28.24■■■□□ 2.11
COL19A1-203ENST00000478620 PPP2R1AP30153 589 aa28.23■■■□□ 2.11
COL19A1-203ENST00000478620 IL13P35225 146 aa28.23■■■□□ 2.11
COL19A1-203ENST00000478620 MEGF6O75095 1541 aa28.22■■■□□ 2.11
COL19A1-203ENST00000478620 BAG6P46379 1132 aa28.21■■■□□ 2.11
COL19A1-203ENST00000478620 APBA3O96018 575 aa28.2■■■□□ 2.1
COL19A1-203ENST00000478620 IGSF1Q8N6C5 1336 aa28.19■■■□□ 2.1
COL19A1-203ENST00000478620 SULT6B1Q6IMI4 303 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms