RNA–Protein interactions for RNA: ENST00000477726.1

SIGMAR1-205, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best) BASIC

Gene SIGMAR1, Length 840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-205ENST00000477726 GLI3P10071 1580 aa37.55■■■■□ 3.6
SIGMAR1-205ENST00000477726 COL5A2P05997 1499 aaPredicted RBP37.52■■■■□ 3.6
SIGMAR1-205ENST00000477726 CCDC7Q96M83 1385 aa37.52■■■■□ 3.6
SIGMAR1-205ENST00000477726 COL18A1P39060 1754 aa37.51■■■■□ 3.6
SIGMAR1-205ENST00000477726 SPATA31A1Q5TZJ5 1347 aa37.5■■■■□ 3.59
SIGMAR1-205ENST00000477726 KNSTRNQ9Y448 316 aa37.49■■■■□ 3.59
SIGMAR1-205ENST00000477726 LTN1O94822 1766 aa37.49■■■■□ 3.59
SIGMAR1-205ENST00000477726 ONECUT3O60422 494 aaPredicted RBP37.48■■■■□ 3.59
SIGMAR1-205ENST00000477726 LARP1Q6PKG0 1096 aaKnown RBP37.48■■■■□ 3.59
SIGMAR1-205ENST00000477726 AXIN2Q9Y2T1 843 aa37.47■■■■□ 3.59
SIGMAR1-205ENST00000477726 A0A0G2JS52 829 aa37.46■■■■□ 3.59
SIGMAR1-205ENST00000477726 CSB-PGBD3P0DP91 1061 aa37.46■■■■□ 3.59
SIGMAR1-205ENST00000477726 MYT1Q01538 1121 aa37.46■■■■□ 3.59
SIGMAR1-205ENST00000477726 WASHC2AQ641Q2 1341 aa37.45■■■■□ 3.59
SIGMAR1-205ENST00000477726 FAM98CQ17RN3 349 aaKnown RBP37.45■■■■□ 3.59
SIGMAR1-205ENST00000477726 THRAP3Q9Y2W1 955 aaKnown RBP37.45■■■■□ 3.59
SIGMAR1-205ENST00000477726 CRB1P82279 1406 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 NSD2O96028 1365 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 WDR17Q8IZU2 1322 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 AMPHP49418 695 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 TOM1L2Q6ZVM7 507 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 SEPT12Q8IYM1 358 aa37.44■■■■□ 3.58
SIGMAR1-205ENST00000477726 TCP11L2Q8N4U5 519 aa37.43■■■■□ 3.58
SIGMAR1-205ENST00000477726 USP35Q9P2H5 1018 aa37.43■■■■□ 3.58
SIGMAR1-205ENST00000477726 IP6K1Q92551 441 aa37.42■■■■□ 3.58
SIGMAR1-205ENST00000477726 BLMP54132 1417 aaPredicted RBP37.42■■■■□ 3.58
SIGMAR1-205ENST00000477726 MAP3K19Q56UN5 1328 aa37.41■■■■□ 3.58
SIGMAR1-205ENST00000477726 BARGINQ6ZT62 677 aa37.4■■■■□ 3.58
SIGMAR1-205ENST00000477726 RGPD5Q99666 1765 aa37.4■■■■□ 3.58
SIGMAR1-205ENST00000477726 RTL1A6NKG5 1358 aa37.39■■■■□ 3.58
SIGMAR1-205ENST00000477726 ERBB3P21860 1342 aa37.36■■■■□ 3.57
SIGMAR1-205ENST00000477726 KIF24Q5T7B8 1368 aa37.35■■■■□ 3.57
SIGMAR1-205ENST00000477726 RRS1Q15050 365 aaKnown RBP37.35■■■■□ 3.57
SIGMAR1-205ENST00000477726 ANKRD26Q9UPS8 1709 aa37.35■■■■□ 3.57
SIGMAR1-205ENST00000477726 FBLN1P23142 703 aa37.34■■■■□ 3.57
SIGMAR1-205ENST00000477726 HOXC9P31274 260 aa37.34■■■■□ 3.57
SIGMAR1-205ENST00000477726 ANKRD24Q8TF21 1146 aa37.34■■■■□ 3.57
SIGMAR1-205ENST00000477726 CARD10Q9BWT7 1032 aa37.34■■■■□ 3.57
SIGMAR1-205ENST00000477726 KRT27Q7Z3Y8 459 aa37.31■■■■□ 3.56
SIGMAR1-205ENST00000477726 MORC1Q86VD1 984 aa37.3■■■■□ 3.56
SIGMAR1-205ENST00000477726 THSD7AQ9UPZ6 1657 aa37.29■■■■□ 3.56
SIGMAR1-205ENST00000477726 CDCA7Q9BWT1 371 aaPredicted RBP37.29■■■■□ 3.56
SIGMAR1-205ENST00000477726 NLRP2Q9NX02 1062 aa37.29■■■■□ 3.56
SIGMAR1-205ENST00000477726 FLT4P35916 1363 aa37.28■■■■□ 3.56
SIGMAR1-205ENST00000477726 BRWD3Q6RI45 1802 aa37.26■■■■□ 3.56
SIGMAR1-205ENST00000477726 PER1O15534 1290 aaPredicted RBP37.26■■■■□ 3.56
SIGMAR1-205ENST00000477726 SMG6Q86US8 1419 aaKnown RBP37.26■■■■□ 3.55
SIGMAR1-205ENST00000477726 AMER1Q5JTC6 1135 aaPredicted RBP37.25■■■■□ 3.55
SIGMAR1-205ENST00000477726 LTV1Q96GA3 475 aaPredicted RBP37.25■■■■□ 3.55
SIGMAR1-205ENST00000477726 FAM208AQ9UK61 1670 aaKnown RBP37.24■■■■□ 3.55
SIGMAR1-205ENST00000477726 TNNT2P45379 298 aaPredicted RBP37.23■■■■□ 3.55
SIGMAR1-205ENST00000477726 INSRP06213 1382 aa37.22■■■■□ 3.55
SIGMAR1-205ENST00000477726 PPM1GO15355 546 aaPredicted RBP37.22■■■■□ 3.55
SIGMAR1-205ENST00000477726 PDE3BQ13370 1112 aa37.22■■■■□ 3.55
SIGMAR1-205ENST00000477726 UPF1Q92900 1129 aaKnown RBP eCLIP37.21■■■■□ 3.551e-7■■■■■ 27.2
SIGMAR1-205ENST00000477726 EMILIN1Q9Y6C2 1016 aa37.21■■■■□ 3.55
SIGMAR1-205ENST00000477726 MAP2P11137 1827 aaKnown RBP37.21■■■■□ 3.55
SIGMAR1-205ENST00000477726 NPC1L1Q9UHC9 1359 aa37.18■■■■□ 3.54
SIGMAR1-205ENST00000477726 POLKQ9UBT6 870 aa37.18■■■■□ 3.54
SIGMAR1-205ENST00000477726 HSP90AB2PQ58FF8 381 aa37.17■■■■□ 3.54
SIGMAR1-205ENST00000477726 PARP4Q9UKK3 1724 aaKnown RBP37.16■■■■□ 3.54
SIGMAR1-205ENST00000477726 DDB1Q16531 1140 aa37.16■■■■□ 3.54
SIGMAR1-205ENST00000477726 CCDC125Q86Z20 511 aa37.15■■■■□ 3.54
SIGMAR1-205ENST00000477726 PEAK1Q9H792 1746 aa37.14■■■■□ 3.54
SIGMAR1-205ENST00000477726 WNK3Q9BYP7 1800 aa37.13■■■■□ 3.53
SIGMAR1-205ENST00000477726 CC2D1BQ5T0F9 858 aaKnown RBP37.13■■■■□ 3.53
SIGMAR1-205ENST00000477726 IL2RBP14784 551 aa37.12■■■■□ 3.53
SIGMAR1-205ENST00000477726 DISP2A7MBM2 1401 aa37.1■■■■□ 3.53
SIGMAR1-205ENST00000477726 EXOC5O00471 708 aa37.1■■■■□ 3.53
SIGMAR1-205ENST00000477726 FAM196AQ6ZSG2 479 aa37.09■■■■□ 3.53
SIGMAR1-205ENST00000477726 SF3B2Q13435 895 aaKnown RBP37.06■■■■□ 3.52
SIGMAR1-205ENST00000477726 LRRC37A3O60309 1634 aa37.05■■■■□ 3.52
SIGMAR1-205ENST00000477726 NBPF6Q5VWK0 638 aa37.04■■■■□ 3.52
SIGMAR1-205ENST00000477726 NBPF4Q96M43 638 aa37.04■■■■□ 3.52
SIGMAR1-205ENST00000477726 CNGB1Q14028 1251 aaPredicted RBP37.01■■■■□ 3.52
SIGMAR1-205ENST00000477726 FAM182BQ5T319 152 aa37.01■■■■□ 3.52
SIGMAR1-205ENST00000477726 RAPGEF4Q8WZA2 1011 aa37■■■■□ 3.51
SIGMAR1-205ENST00000477726 TNS2Q63HR2 1409 aa37■■■■□ 3.51
SIGMAR1-205ENST00000477726 EP400Q96L91 3159 aa36.99■■■■□ 3.51
SIGMAR1-205ENST00000477726 RGPD2P0DJD1 1756 aa36.99■■■■□ 3.51
SIGMAR1-205ENST00000477726 OVOS2A0A0G2JMS6 1433 aa36.99■■■■□ 3.51
SIGMAR1-205ENST00000477726 EIF4A2Q14240 407 aaKnown RBP36.96■■■■□ 3.51
SIGMAR1-205ENST00000477726 TATP17735 454 aaPredicted RBP36.95■■■■□ 3.51
SIGMAR1-205ENST00000477726 USHBP1Q8N6Y0 703 aa36.95■■■■□ 3.51
SIGMAR1-205ENST00000477726 MTHFSP49914 203 aa36.94■■■■□ 3.5
SIGMAR1-205ENST00000477726 MARCH10Q8NA82 808 aaPredicted RBP36.92■■■■□ 3.5
SIGMAR1-205ENST00000477726 EYA1Q99502 592 aa36.92■■■■□ 3.5
SIGMAR1-205ENST00000477726 DDX10Q13206 875 aaKnown RBP36.91■■■■□ 3.5
SIGMAR1-205ENST00000477726 RGPD1P0DJD0 1748 aa36.9■■■■□ 3.5
SIGMAR1-205ENST00000477726 ZCRB1Q8TBF4 217 aaKnown RBP36.89■■■■□ 3.5
SIGMAR1-205ENST00000477726 BCL9O00512 1426 aa36.88■■■■□ 3.49
SIGMAR1-205ENST00000477726 NCAPD2Q15021 1401 aa36.87■■■■□ 3.49
SIGMAR1-205ENST00000477726 MEGF6O75095 1541 aa36.87■■■■□ 3.49
SIGMAR1-205ENST00000477726 TRIM37O94972 964 aa36.87■■■■□ 3.49
SIGMAR1-205ENST00000477726 BAG6P46379 1132 aa36.87■■■■□ 3.49
SIGMAR1-205ENST00000477726 DDX54Q8TDD1 881 aaKnown RBP36.84■■■■□ 3.49
SIGMAR1-205ENST00000477726 IGSF1Q8N6C5 1336 aa36.84■■■■□ 3.49
SIGMAR1-205ENST00000477726 CFAP53Q96M91 514 aa36.82■■■■□ 3.48
SIGMAR1-205ENST00000477726 DIAPH1O60610 1272 aaKnown RBP36.8■■■■□ 3.48
SIGMAR1-205ENST00000477726 IL13P35225 146 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms