RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
DFFB-209ENST00000477548 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
DFFB-209ENST00000477548 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
DFFB-209ENST00000477548 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
DFFB-209ENST00000477548 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
DFFB-209ENST00000477548 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
DFFB-209ENST00000477548 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.24
DFFB-209ENST00000477548 NOS1P29475 1434 aa16.52■□□□□ 0.24
DFFB-209ENST00000477548 YEATS2Q9ULM3 1422 aa16.52■□□□□ 0.23
DFFB-209ENST00000477548 RABEP1Q15276 862 aa16.52■□□□□ 0.23
DFFB-209ENST00000477548 DNTTIP2Q5QJE6 756 aaKnown RBP16.52■□□□□ 0.23
DFFB-209ENST00000477548 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 ZBTB7CA1YPR0 619 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 PKP1Q13835 747 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 MLH3Q9UHC1 1453 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 CDC45O75419 566 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
DFFB-209ENST00000477548 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 SYCE3A1L190 88 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 GPT2Q8TD30 523 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
DFFB-209ENST00000477548 DMTNQ08495 405 aa16.49■□□□□ 0.23
DFFB-209ENST00000477548 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
DFFB-209ENST00000477548 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
DFFB-209ENST00000477548 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
DFFB-209ENST00000477548 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
DFFB-209ENST00000477548 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
DFFB-209ENST00000477548 C1orf115Q9H7X2 142 aa16.48■□□□□ 0.23
DFFB-209ENST00000477548 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
DFFB-209ENST00000477548 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
DFFB-209ENST00000477548 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
DFFB-209ENST00000477548 IPO4Q8TEX9 1081 aaKnown RBP16.48■□□□□ 0.23
DFFB-209ENST00000477548 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
DFFB-209ENST00000477548 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
DFFB-209ENST00000477548 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
DFFB-209ENST00000477548 MAP3K4Q9Y6R4 1608 aa16.47■□□□□ 0.23
DFFB-209ENST00000477548 KIF1BO60333 1816 aa16.46■□□□□ 0.23
DFFB-209ENST00000477548 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
DFFB-209ENST00000477548 MYRIPQ8NFW9 859 aa16.46■□□□□ 0.22
DFFB-209ENST00000477548 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
DFFB-209ENST00000477548 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
DFFB-209ENST00000477548 ABCC3O15438 1527 aa16.45■□□□□ 0.22
DFFB-209ENST00000477548 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
DFFB-209ENST00000477548 SIGLEC1Q9BZZ2 1709 aa16.44■□□□□ 0.22
DFFB-209ENST00000477548 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
DFFB-209ENST00000477548 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
DFFB-209ENST00000477548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
DFFB-209ENST00000477548 ST18O60284 1047 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 IDI1Q13907 227 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.226e-6■■■□□ 18.5
DFFB-209ENST00000477548 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
DFFB-209ENST00000477548 FBXO31Q5XUX0 539 aaPredicted RBP16.43■□□□□ 0.22
DFFB-209ENST00000477548 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
DFFB-209ENST00000477548 CHAMP1Q96JM3 812 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 CBX1P83916 185 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 TSC1Q92574 1164 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
DFFB-209ENST00000477548 NSFL1CQ9UNZ2 370 aaKnown RBP16.43■□□□□ 0.22
DFFB-209ENST00000477548 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
DFFB-209ENST00000477548 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
DFFB-209ENST00000477548 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 IL16Q14005 1332 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 MYOM2P54296 1465 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 NEO1Q92859 1461 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 MBD3O95983 291 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
DFFB-209ENST00000477548 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
DFFB-209ENST00000477548 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
DFFB-209ENST00000477548 HMGN5P82970 282 aaKnown RBP16.41■□□□□ 0.22
DFFB-209ENST00000477548 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
DFFB-209ENST00000477548 PRIMPOLQ96LW4 560 aa16.41■□□□□ 0.22
DFFB-209ENST00000477548 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
DFFB-209ENST00000477548 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
DFFB-209ENST00000477548 MPNDQ8N594 471 aa16.4■□□□□ 0.22
DFFB-209ENST00000477548 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
DFFB-209ENST00000477548 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
DFFB-209ENST00000477548 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
DFFB-209ENST00000477548 TSPOAP1O95153 1857 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
DFFB-209ENST00000477548 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.21
DFFB-209ENST00000477548 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
DFFB-209ENST00000477548 MLECQ14165 292 aa16.38■□□□□ 0.21
DFFB-209ENST00000477548 RIMBP3CA6NJZ7 1639 aa16.38■□□□□ 0.21
DFFB-209ENST00000477548 RIMBP3BA6NNM3 1639 aa16.38■□□□□ 0.21
DFFB-209ENST00000477548 RIMBP3Q9UFD9 1639 aa16.38■□□□□ 0.21
DFFB-209ENST00000477548 PLEKHM2Q8IWE5 1019 aa16.37■□□□□ 0.21
DFFB-209ENST00000477548 ZNF830Q96NB3 372 aaPredicted RBP16.37■□□□□ 0.21
DFFB-209ENST00000477548 STK26Q9P289 416 aa16.37■□□□□ 0.21
DFFB-209ENST00000477548 NOLC1Q14978 699 aaKnown RBP eCLIP16.37■□□□□ 0.21
DFFB-209ENST00000477548 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms