RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 SENP2Q9HC62 589 aa7.47□□□□□ -1.21
RPL39-203ENST00000477403 SNRKQ9NRH2 765 aa7.47□□□□□ -1.21
RPL39-203ENST00000477403 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
RPL39-203ENST00000477403 KCTD15Q96SI1 283 aaPredicted RBP7.46□□□□□ -1.22
RPL39-203ENST00000477403 KLF16Q9BXK1 252 aaPredicted RBP7.46□□□□□ -1.22
RPL39-203ENST00000477403 BICRAQ9NZM4 1560 aa7.46□□□□□ -1.22
RPL39-203ENST00000477403 CECR2Q9BXF3 1484 aa7.45□□□□□ -1.22
RPL39-203ENST00000477403 SNRPBP14678 240 aaKnown RBP7.45□□□□□ -1.22
RPL39-203ENST00000477403 DZIP3Q86Y13 1208 aaKnown RBP7.45□□□□□ -1.22
RPL39-203ENST00000477403 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
RPL39-203ENST00000477403 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
RPL39-203ENST00000477403 TRIM47Q96LD4 638 aa7.45□□□□□ -1.22
RPL39-203ENST00000477403 CDV3Q9UKY7 258 aaKnown RBP7.45□□□□□ -1.22
RPL39-203ENST00000477403 SHROOM4Q9ULL8 1493 aa7.44□□□□□ -1.22
RPL39-203ENST00000477403 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
RPL39-203ENST00000477403 KIFC2Q96AC6 838 aa7.44□□□□□ -1.22
RPL39-203ENST00000477403 ZBBXA8MT70 800 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 APBB1O00213 710 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 RAB15P59190 212 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 SCARF1Q14162 830 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 PURBQ96QR8 312 aaKnown RBP7.43□□□□□ -1.22
RPL39-203ENST00000477403 EMILIN1Q9Y6C2 1016 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 NDUFB9Q9Y6M9 179 aa7.43□□□□□ -1.22
RPL39-203ENST00000477403 FBXO45P0C2W1 286 aa7.42□□□□□ -1.22
RPL39-203ENST00000477403 NBPF20Q3BBV1 942 aa7.42□□□□□ -1.22
RPL39-203ENST00000477403 INTS6LQ5JSJ4 861 aaKnown RBP7.42□□□□□ -1.22
RPL39-203ENST00000477403 PPP1R26Q5T8A7 1209 aaPredicted RBP7.42□□□□□ -1.22
RPL39-203ENST00000477403 SOCS7O14512 581 aa7.41□□□□□ -1.22
RPL39-203ENST00000477403 C6orf118Q5T5N4 469 aa7.41□□□□□ -1.22
RPL39-203ENST00000477403 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
RPL39-203ENST00000477403 PCDHB9Q9Y5E1 797 aa7.41□□□□□ -1.22
RPL39-203ENST00000477403 UPP2O95045 317 aa7.4□□□□□ -1.22
RPL39-203ENST00000477403 DHX9Q08211 1270 aaKnown RBP7.4□□□□□ -1.22
RPL39-203ENST00000477403 BMP2P12643 396 aa7.39□□□□□ -1.23
RPL39-203ENST00000477403 MEIOBQ8N635 442 aa7.39□□□□□ -1.23
RPL39-203ENST00000477403 GPR37L1O60883 481 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 NR1H3Q13133 447 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 CBLBQ13191 982 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 LINC00528Q8N1L1 170 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 TBC1D2BQ9UPU7 963 aa7.38□□□□□ -1.23
RPL39-203ENST00000477403 TMPRSS4Q9NRS4 437 aa7.37□□□□□ -1.23
RPL39-203ENST00000477403 ZNF330Q9Y3S2 320 aaPredicted RBP7.37□□□□□ -1.23
RPL39-203ENST00000477403 CC2D2AQ9P2K1 1620 aa7.37□□□□□ -1.23
RPL39-203ENST00000477403 UNC13AQ9UPW8 1703 aa7.36□□□□□ -1.23
RPL39-203ENST00000477403 ERVH48-1M5A8F1 160 aa7.36□□□□□ -1.23
RPL39-203ENST00000477403 GIGYF1O75420 1035 aaPredicted RBP7.36□□□□□ -1.23
RPL39-203ENST00000477403 TSEN34Q9BSV6 310 aaKnown RBP7.36□□□□□ -1.23
RPL39-203ENST00000477403 SOBPA7XYQ1 873 aa7.35□□□□□ -1.23
RPL39-203ENST00000477403 ESPNB1AK53 854 aa7.35□□□□□ -1.23
RPL39-203ENST00000477403 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
RPL39-203ENST00000477403 Q6ZVU0 165 aa7.34□□□□□ -1.23
RPL39-203ENST00000477403 SEPT12Q8IYM1 358 aa7.34□□□□□ -1.23
RPL39-203ENST00000477403 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
RPL39-203ENST00000477403 MAN1A2O60476 641 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 WFS1O76024 890 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 RELBQ01201 579 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 MCM6Q14566 821 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 GDPD2Q9HCC8 539 aa7.33□□□□□ -1.24
RPL39-203ENST00000477403 TERTO14746 1132 aaKnown RBP7.32□□□□□ -1.24
RPL39-203ENST00000477403 ABL2P42684 1182 aa7.32□□□□□ -1.24
RPL39-203ENST00000477403 MCCD1P59942 119 aaPredicted RBP7.32□□□□□ -1.24
RPL39-203ENST00000477403 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
RPL39-203ENST00000477403 LILRA1O75019 489 aa7.31□□□□□ -1.24
RPL39-203ENST00000477403 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
RPL39-203ENST00000477403 EIF4G1Q04637 1599 aaKnown RBP7.31□□□□□ -1.24
RPL39-203ENST00000477403 NFX1Q12986 1120 aaKnown RBP7.31□□□□□ -1.24
RPL39-203ENST00000477403 IRF5Q13568 498 aa7.31□□□□□ -1.24
RPL39-203ENST00000477403 RNF20Q5VTR2 975 aa7.31□□□□□ -1.24
RPL39-203ENST00000477403 NXF1Q9UBU9 619 aaKnown RBP7.31□□□□□ -1.24
RPL39-203ENST00000477403 SOS2Q07890 1332 aaPredicted RBP7.3□□□□□ -1.24
RPL39-203ENST00000477403 TTLL8A6PVC2 850 aa7.3□□□□□ -1.24
RPL39-203ENST00000477403 ADH1AP07327 375 aa7.3□□□□□ -1.24
RPL39-203ENST00000477403 VEGFBP49765 207 aa7.3□□□□□ -1.24
RPL39-203ENST00000477403 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
RPL39-203ENST00000477403 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
RPL39-203ENST00000477403 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
RPL39-203ENST00000477403 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 SPINT1O43278 529 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.24
RPL39-203ENST00000477403 VAC14Q08AM6 782 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 TMEM132AQ24JP5 1023 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 TRIM52Q96A61 297 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 PCDHB11Q9Y5F2 797 aa7.29□□□□□ -1.24
RPL39-203ENST00000477403 SLC16A10Q8TF71 515 aa7.28□□□□□ -1.24
RPL39-203ENST00000477403 INSM2Q96T92 566 aaPredicted RBP7.28□□□□□ -1.24
RPL39-203ENST00000477403 POLMQ9NP87 494 aaPredicted RBP7.28□□□□□ -1.24
RPL39-203ENST00000477403 CEP126Q9P2H0 1117 aa7.28□□□□□ -1.24
RPL39-203ENST00000477403 PTGIRP43119 386 aa7.27□□□□□ -1.25
RPL39-203ENST00000477403 CTSOP43234 321 aaPredicted RBP7.27□□□□□ -1.25
RPL39-203ENST00000477403 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
RPL39-203ENST00000477403 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
RPL39-203ENST00000477403 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
RPL39-203ENST00000477403 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.26□□□□□ -1.25
RPL39-203ENST00000477403 CC2D2BQ6DHV5 1058 aa7.26□□□□□ -1.25
RPL39-203ENST00000477403 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
RPL39-203ENST00000477403 COG6Q9Y2V7 657 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms