RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 FCHSD2O94868 740 aa38.11■■■■□ 3.69
VEGFA-211ENST00000476772 TCP11L2Q8N4U5 519 aa38.11■■■■□ 3.69
VEGFA-211ENST00000476772 RSPH6AQ9H0K4 717 aa38.11■■■■□ 3.69
VEGFA-211ENST00000476772 HMOX1P09601 288 aa38.09■■■■□ 3.69
VEGFA-211ENST00000476772 CRYBG1Q9Y4K1 1723 aa38.09■■■■□ 3.69
VEGFA-211ENST00000476772 PNNQ9H307 717 aaKnown RBP38.07■■■■□ 3.69
VEGFA-211ENST00000476772 PDE3BQ13370 1112 aa38.06■■■■□ 3.68
VEGFA-211ENST00000476772 ARHGEF25Q86VW2 580 aa38.06■■■■□ 3.68
VEGFA-211ENST00000476772 NGEFQ8N5V2 710 aa38.06■■■■□ 3.68
VEGFA-211ENST00000476772 ZNF521Q96K83 1311 aa38.06■■■■□ 3.68
VEGFA-211ENST00000476772 ZBTB7CA1YPR0 619 aa38.05■■■■□ 3.68
VEGFA-211ENST00000476772 PRKAR2BP31323 418 aa38.05■■■■□ 3.68
VEGFA-211ENST00000476772 IP6K1Q92551 441 aa38.05■■■■□ 3.68
VEGFA-211ENST00000476772 MAPK8IP3Q9UPT6 1336 aa38.05■■■■□ 3.68
VEGFA-211ENST00000476772 RRP7AQ9Y3A4 280 aaKnown RBP38.04■■■■□ 3.68
VEGFA-211ENST00000476772 NEUROD2Q15784 382 aa38.01■■■■□ 3.68
VEGFA-211ENST00000476772 CABLES1Q8TDN4 633 aa38.01■■■■□ 3.68
VEGFA-211ENST00000476772 CDCA7LQ96GN5 454 aa38■■■■□ 3.67
VEGFA-211ENST00000476772 AHDC1Q5TGY3 1603 aaPredicted RBP37.99■■■■□ 3.67
VEGFA-211ENST00000476772 SULT6B1Q6IMI4 303 aa37.98■■■■□ 3.67
VEGFA-211ENST00000476772 AEBP1Q8IUX7 1158 aa37.98■■■■□ 3.67
VEGFA-211ENST00000476772 ZC3H6P61129 1189 aaKnown RBP37.97■■■■□ 3.67
VEGFA-211ENST00000476772 LTV1Q96GA3 475 aaPredicted RBP37.96■■■■□ 3.67
VEGFA-211ENST00000476772 TMPOP42166 694 aaKnown RBP37.95■■■■□ 3.67
VEGFA-211ENST00000476772 IGSF1Q8N6C5 1336 aa37.95■■■■□ 3.67
VEGFA-211ENST00000476772 NEFMP07197 916 aa37.95■■■■□ 3.66
VEGFA-211ENST00000476772 NCBP3Q53F19 620 aaKnown RBP37.95■■■■□ 3.66
VEGFA-211ENST00000476772 WWC1Q8IX03 1113 aa37.95■■■■□ 3.66
VEGFA-211ENST00000476772 EYA1Q99502 592 aa37.95■■■■□ 3.66
VEGFA-211ENST00000476772 PHF23Q9BUL5 403 aaPredicted RBP37.94■■■■□ 3.66
VEGFA-211ENST00000476772 PHACTR3Q96KR7 559 aa37.93■■■■□ 3.66
VEGFA-211ENST00000476772 GOLGA2Q08379 1002 aa37.92■■■■□ 3.66
VEGFA-211ENST00000476772 CCDC27Q2M243 656 aa37.92■■■■□ 3.66
VEGFA-211ENST00000476772 ABCA3Q99758 1704 aa37.92■■■■□ 3.66
VEGFA-211ENST00000476772 TOM1O60784 492 aa37.91■■■■□ 3.66
VEGFA-211ENST00000476772 KDRP35968 1356 aa37.9■■■■□ 3.66
VEGFA-211ENST00000476772 RGPD5Q99666 1765 aa37.89■■■■□ 3.66
VEGFA-211ENST00000476772 COL18A1P39060 1754 aa37.88■■■■□ 3.65
VEGFA-211ENST00000476772 AXIN2Q9Y2T1 843 aa37.87■■■■□ 3.65
VEGFA-211ENST00000476772 CPDO75976 1380 aa37.86■■■■□ 3.65
VEGFA-211ENST00000476772 RIPK4P57078 832 aa37.85■■■■□ 3.65
VEGFA-211ENST00000476772 KIAA0232Q92628 1395 aa37.85■■■■□ 3.65
VEGFA-211ENST00000476772 NFE2L2Q16236 605 aa37.85■■■■□ 3.65
VEGFA-211ENST00000476772 RGPD2P0DJD1 1756 aa37.84■■■■□ 3.65
VEGFA-211ENST00000476772 SLFN5Q08AF3 891 aa37.84■■■■□ 3.65
VEGFA-211ENST00000476772 LRRC59Q96AG4 307 aaKnown RBP37.84■■■■□ 3.65
VEGFA-211ENST00000476772 TRIM35Q9UPQ4 493 aa37.84■■■■□ 3.65
VEGFA-211ENST00000476772 ABCC6O95255 1503 aa37.83■■■■□ 3.65
VEGFA-211ENST00000476772 PIP4K2BP78356 416 aa37.83■■■■□ 3.65
VEGFA-211ENST00000476772 SPINK5Q9NQ38 1064 aaPredicted RBP37.83■■■■□ 3.65
VEGFA-211ENST00000476772 GTF3C3Q9Y5Q9 886 aa37.83■■■■□ 3.65
VEGFA-211ENST00000476772 PHLPP1O60346 1717 aa37.83■■■■□ 3.65
VEGFA-211ENST00000476772 ANKRD24Q8TF21 1146 aa37.82■■■■□ 3.65
VEGFA-211ENST00000476772 UBAP1LF5GYI3 381 aa37.81■■■■□ 3.64
VEGFA-211ENST00000476772 WDR63Q8IWG1 891 aa37.81■■■■□ 3.64
VEGFA-211ENST00000476772 HAP1P54257 671 aaPredicted RBP37.79■■■■□ 3.64
VEGFA-211ENST00000476772 CHRNA2Q15822 529 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 NBPF6Q5VWK0 638 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 DUSP27Q5VZP5 1158 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 NBPF4Q96M43 638 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 DLG5Q8TDM6 1919 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 COL16A1Q07092 1604 aaPredicted RBP37.79■■■■□ 3.64
VEGFA-211ENST00000476772 E9PSI1 815 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 USHBP1Q8N6Y0 703 aa37.79■■■■□ 3.64
VEGFA-211ENST00000476772 TRMT2AQ8IZ69 625 aaKnown RBP37.78■■■■□ 3.64
VEGFA-211ENST00000476772 SUPT16HQ9Y5B9 1047 aaKnown RBP37.78■■■■□ 3.64
VEGFA-211ENST00000476772 ERBB3P21860 1342 aa37.77■■■■□ 3.64
VEGFA-211ENST00000476772 CAMTA1Q9Y6Y1 1673 aa37.76■■■■□ 3.64
VEGFA-211ENST00000476772 COL22A1Q8NFW1 1626 aaPredicted RBP37.75■■■■□ 3.63
VEGFA-211ENST00000476772 CERKQ8TCT0 537 aa37.73■■■■□ 3.63
VEGFA-211ENST00000476772 PRDM11Q9NQV5 511 aa37.72■■■■□ 3.63
VEGFA-211ENST00000476772 NCAPD2Q15021 1401 aa37.72■■■■□ 3.63
VEGFA-211ENST00000476772 LMO7Q8WWI1 1683 aa37.7■■■■□ 3.63
VEGFA-211ENST00000476772 FAM208AQ9UK61 1670 aaKnown RBP37.67■■■■□ 3.62
VEGFA-211ENST00000476772 MTHFSDQ2M296 383 aaKnown RBP37.67■■■■□ 3.62
VEGFA-211ENST00000476772 LMOD3Q0VAK6 560 aa37.66■■■■□ 3.62
VEGFA-211ENST00000476772 IL16Q14005 1332 aa37.64■■■■□ 3.62
VEGFA-211ENST00000476772 RCAN3Q9UKA8 241 aa37.63■■■■□ 3.62
VEGFA-211ENST00000476772 CSB-PGBD3P0DP91 1061 aa37.62■■■■□ 3.61
VEGFA-211ENST00000476772 GAS2L2Q8NHY3 880 aa37.62■■■■□ 3.61
VEGFA-211ENST00000476772 THUMPD2Q9BTF0 503 aaKnown RBP37.62■■■■□ 3.61
VEGFA-211ENST00000476772 FAM83GA6ND36 823 aa37.61■■■■□ 3.61
VEGFA-211ENST00000476772 MYH16Q9H6N6 1097 aa37.61■■■■□ 3.61
VEGFA-211ENST00000476772 NLRP2Q9NX02 1062 aa37.6■■■■□ 3.61
VEGFA-211ENST00000476772 COL5A2P05997 1499 aaPredicted RBP37.58■■■■□ 3.61
VEGFA-211ENST00000476772 DCTN1Q14203 1278 aa37.57■■■■□ 3.61
VEGFA-211ENST00000476772 NEFLP07196 543 aa37.56■■■■□ 3.6
VEGFA-211ENST00000476772 CALD1Q05682 793 aaKnown RBP37.56■■■■□ 3.6
VEGFA-211ENST00000476772 FANCIQ9NVI1 1328 aa37.55■■■■□ 3.6
VEGFA-211ENST00000476772 TSR2Q969E8 191 aaKnown RBP37.54■■■■□ 3.6
VEGFA-211ENST00000476772 RNF123Q5XPI4 1314 aa37.54■■■■□ 3.6
VEGFA-211ENST00000476772 COL14A1Q05707 1796 aaKnown RBP37.53■■■■□ 3.6
VEGFA-211ENST00000476772 WDR17Q8IZU2 1322 aa37.52■■■■□ 3.6
VEGFA-211ENST00000476772 MCM10Q7L590 875 aa37.52■■■■□ 3.6
VEGFA-211ENST00000476772 FKBP8Q14318 412 aa37.5■■■■□ 3.59
VEGFA-211ENST00000476772 RTF1Q92541 710 aaKnown RBP37.49■■■■□ 3.59
VEGFA-211ENST00000476772 LAS1LQ9Y4W2 734 aaKnown RBP37.49■■■■□ 3.59
VEGFA-211ENST00000476772 MAP3K5Q99683 1374 aa37.49■■■■□ 3.59
VEGFA-211ENST00000476772 IFT57Q9NWB7 429 aa37.48■■■■□ 3.59
VEGFA-211ENST00000476772 GNAT3A8MTJ3 354 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms