RNA–Protein interactions for RNA: ENST00000475966.1

DKC1-209, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-209ENST00000475966 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
DKC1-209ENST00000475966 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
DKC1-209ENST00000475966 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
DKC1-209ENST00000475966 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
DKC1-209ENST00000475966 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
DKC1-209ENST00000475966 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
DKC1-209ENST00000475966 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
DKC1-209ENST00000475966 PNISRQ8TF01 805 aaKnown RBP13.52□□□□□ -0.25
DKC1-209ENST00000475966 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
DKC1-209ENST00000475966 USP19O94966 1318 aa13.52□□□□□ -0.25
DKC1-209ENST00000475966 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
DKC1-209ENST00000475966 AKAP12Q02952 1782 aa13.52□□□□□ -0.25
DKC1-209ENST00000475966 MON2Q7Z3U7 1717 aa13.51□□□□□ -0.25
DKC1-209ENST00000475966 CPDO75976 1380 aa13.51□□□□□ -0.25
DKC1-209ENST00000475966 A0A0G2JS52 829 aa13.51□□□□□ -0.25
DKC1-209ENST00000475966 MYT1Q01538 1121 aa13.51□□□□□ -0.25
DKC1-209ENST00000475966 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
DKC1-209ENST00000475966 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
DKC1-209ENST00000475966 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
DKC1-209ENST00000475966 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
DKC1-209ENST00000475966 FYB1O15117 783 aa13.5□□□□□ -0.25
DKC1-209ENST00000475966 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
DKC1-209ENST00000475966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
DKC1-209ENST00000475966 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 GCP02774 474 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
DKC1-209ENST00000475966 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
DKC1-209ENST00000475966 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
DKC1-209ENST00000475966 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
DKC1-209ENST00000475966 BARGINQ6ZT62 677 aa13.48□□□□□ -0.25
DKC1-209ENST00000475966 USP6P35125 1406 aa13.47□□□□□ -0.25
DKC1-209ENST00000475966 BAG6P46379 1132 aa13.47□□□□□ -0.25
DKC1-209ENST00000475966 EVA1CP58658 441 aa13.47□□□□□ -0.25
DKC1-209ENST00000475966 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
DKC1-209ENST00000475966 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
DKC1-209ENST00000475966 DISP2A7MBM2 1401 aa13.46□□□□□ -0.26
DKC1-209ENST00000475966 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
DKC1-209ENST00000475966 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
DKC1-209ENST00000475966 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
DKC1-209ENST00000475966 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
DKC1-209ENST00000475966 INSRP06213 1382 aa13.45□□□□□ -0.26
DKC1-209ENST00000475966 NLRP6P59044 892 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■■■ 38.4
DKC1-209ENST00000475966 NME9Q86XW9 330 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 COL18A1P39060 1754 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 SLIT3O75094 1523 aa13.44□□□□□ -0.26
DKC1-209ENST00000475966 COG3Q96JB2 828 aa13.43□□□□□ -0.26
DKC1-209ENST00000475966 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
DKC1-209ENST00000475966 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
DKC1-209ENST00000475966 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
DKC1-209ENST00000475966 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
DKC1-209ENST00000475966 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
DKC1-209ENST00000475966 TTC21AQ8NDW8 1320 aa13.42□□□□□ -0.26
DKC1-209ENST00000475966 TRIM37O94972 964 aa13.42□□□□□ -0.26
DKC1-209ENST00000475966 MTHFSP49914 203 aa13.42□□□□□ -0.26
DKC1-209ENST00000475966 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
DKC1-209ENST00000475966 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
DKC1-209ENST00000475966 PARP4Q9UKK3 1724 aaKnown RBP13.4□□□□□ -0.26
DKC1-209ENST00000475966 PDE3BQ13370 1112 aa13.4□□□□□ -0.26
DKC1-209ENST00000475966 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
DKC1-209ENST00000475966 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
DKC1-209ENST00000475966 CRB1P82279 1406 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 LRP5O75197 1615 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
DKC1-209ENST00000475966 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 RGPD5Q99666 1765 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
DKC1-209ENST00000475966 APBA3O96018 575 aa13.38□□□□□ -0.27
DKC1-209ENST00000475966 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
DKC1-209ENST00000475966 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
DKC1-209ENST00000475966 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
DKC1-209ENST00000475966 PEAK1Q9H792 1746 aa13.36□□□□□ -0.27
DKC1-209ENST00000475966 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
DKC1-209ENST00000475966 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
DKC1-209ENST00000475966 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
DKC1-209ENST00000475966 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
DKC1-209ENST00000475966 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
DKC1-209ENST00000475966 NFAT5O94916 1531 aa13.35□□□□□ -0.27
DKC1-209ENST00000475966 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
DKC1-209ENST00000475966 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
DKC1-209ENST00000475966 FBLN1P23142 703 aa13.34□□□□□ -0.27
DKC1-209ENST00000475966 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
DKC1-209ENST00000475966 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
DKC1-209ENST00000475966 RREB1Q92766 1687 aa13.34□□□□□ -0.27
DKC1-209ENST00000475966 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
DKC1-209ENST00000475966 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
DKC1-209ENST00000475966 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
DKC1-209ENST00000475966 WNK3Q9BYP7 1800 aa13.33□□□□□ -0.28
DKC1-209ENST00000475966 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
DKC1-209ENST00000475966 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
DKC1-209ENST00000475966 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
DKC1-209ENST00000475966 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
DKC1-209ENST00000475966 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms