RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
ABCF3-211ENST00000475728 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
ABCF3-211ENST00000475728 GGNBP2Q9H3C7 697 aa19.89■□□□□ 0.77
ABCF3-211ENST00000475728 A0A0G2JS52 829 aa19.88■□□□□ 0.77
ABCF3-211ENST00000475728 MYT1Q01538 1121 aa19.88■□□□□ 0.77
ABCF3-211ENST00000475728 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
ABCF3-211ENST00000475728 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
ABCF3-211ENST00000475728 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
ABCF3-211ENST00000475728 PANK3Q9H999 370 aa19.88■□□□□ 0.77
ABCF3-211ENST00000475728 THRAP3Q9Y2W1 955 aaKnown RBP19.88■□□□□ 0.77
ABCF3-211ENST00000475728 CRB1P82279 1406 aa19.86■□□□□ 0.77
ABCF3-211ENST00000475728 WDR17Q8IZU2 1322 aa19.86■□□□□ 0.77
ABCF3-211ENST00000475728 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
ABCF3-211ENST00000475728 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
ABCF3-211ENST00000475728 EP400Q96L91 3159 aa19.86■□□□□ 0.77
ABCF3-211ENST00000475728 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
ABCF3-211ENST00000475728 BARGINQ6ZT62 677 aa19.85■□□□□ 0.77
ABCF3-211ENST00000475728 TOM1L2Q6ZVM7 507 aa19.85■□□□□ 0.77
ABCF3-211ENST00000475728 COL18A1P39060 1754 aa19.85■□□□□ 0.77
ABCF3-211ENST00000475728 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
ABCF3-211ENST00000475728 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
ABCF3-211ENST00000475728 AMPHP49418 695 aa19.83■□□□□ 0.77
ABCF3-211ENST00000475728 IP6K1Q92551 441 aa19.83■□□□□ 0.77
ABCF3-211ENST00000475728 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.77
ABCF3-211ENST00000475728 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.76
ABCF3-211ENST00000475728 NSD2O96028 1365 aa19.83■□□□□ 0.76
ABCF3-211ENST00000475728 CCDC7Q96M83 1385 aa19.83■□□□□ 0.76
ABCF3-211ENST00000475728 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
ABCF3-211ENST00000475728 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-211ENST00000475728 KRT27Q7Z3Y8 459 aa19.82■□□□□ 0.76
ABCF3-211ENST00000475728 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
ABCF3-211ENST00000475728 CARD10Q9BWT7 1032 aa19.81■□□□□ 0.76
ABCF3-211ENST00000475728 ERBB3P21860 1342 aa19.8■□□□□ 0.76
ABCF3-211ENST00000475728 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-211ENST00000475728 KIF24Q5T7B8 1368 aa19.8■□□□□ 0.76
ABCF3-211ENST00000475728 ANKRD24Q8TF21 1146 aa19.79■□□□□ 0.76
ABCF3-211ENST00000475728 WASHC2AQ641Q2 1341 aa19.78■□□□□ 0.76
ABCF3-211ENST00000475728 LTN1O94822 1766 aa19.78■□□□□ 0.76
ABCF3-211ENST00000475728 HOXC9P31274 260 aa19.78■□□□□ 0.76
ABCF3-211ENST00000475728 THSD7AQ9UPZ6 1657 aa19.78■□□□□ 0.76
ABCF3-211ENST00000475728 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.76
ABCF3-211ENST00000475728 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
ABCF3-211ENST00000475728 PDE3BQ13370 1112 aa19.76■□□□□ 0.75
ABCF3-211ENST00000475728 CCDC125Q86Z20 511 aa19.76■□□□□ 0.75
ABCF3-211ENST00000475728 FLT4P35916 1363 aa19.75■□□□□ 0.75
ABCF3-211ENST00000475728 FBLN1P23142 703 aa19.75■□□□□ 0.75
ABCF3-211ENST00000475728 SMG6Q86US8 1419 aaKnown RBP19.75■□□□□ 0.75
ABCF3-211ENST00000475728 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
ABCF3-211ENST00000475728 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
ABCF3-211ENST00000475728 RGPD5Q99666 1765 aa19.72■□□□□ 0.75
ABCF3-211ENST00000475728 INSRP06213 1382 aa19.72■□□□□ 0.75
ABCF3-211ENST00000475728 DEFB132Q7Z7B7 95 aa19.72■□□□□ 0.75
ABCF3-211ENST00000475728 LRP5O75197 1615 aa19.72■□□□□ 0.75
ABCF3-211ENST00000475728 DDB1Q16531 1140 aa19.71■□□□□ 0.75
ABCF3-211ENST00000475728 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-211ENST00000475728 BRWD3Q6RI45 1802 aa19.71■□□□□ 0.75
ABCF3-211ENST00000475728 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
ABCF3-211ENST00000475728 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
ABCF3-211ENST00000475728 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
ABCF3-211ENST00000475728 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
ABCF3-211ENST00000475728 FAM208AQ9UK61 1670 aaKnown RBP19.69■□□□□ 0.74
ABCF3-211ENST00000475728 PER1O15534 1290 aaPredicted RBP19.69■□□□□ 0.74
ABCF3-211ENST00000475728 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
ABCF3-211ENST00000475728 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
ABCF3-211ENST00000475728 POLKQ9UBT6 870 aa19.69■□□□□ 0.74
ABCF3-211ENST00000475728 DISP2A7MBM2 1401 aa19.68■□□□□ 0.74
ABCF3-211ENST00000475728 PARP4Q9UKK3 1724 aaKnown RBP19.68■□□□□ 0.74
ABCF3-211ENST00000475728 EXOC5O00471 708 aa19.68■□□□□ 0.74
ABCF3-211ENST00000475728 IL2RBP14784 551 aa19.68■□□□□ 0.74
ABCF3-211ENST00000475728 HSP90AB2PQ58FF8 381 aa19.68■□□□□ 0.74
ABCF3-211ENST00000475728 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
ABCF3-211ENST00000475728 WNK3Q9BYP7 1800 aa19.63■□□□□ 0.73
ABCF3-211ENST00000475728 PEAK1Q9H792 1746 aa19.63■□□□□ 0.73
ABCF3-211ENST00000475728 OVOS2A0A0G2JMS6 1433 aa19.63■□□□□ 0.73
ABCF3-211ENST00000475728 TNS2Q63HR2 1409 aa19.63■□□□□ 0.73
ABCF3-211ENST00000475728 PSDA5PKW4 1024 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-211ENST00000475728 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
ABCF3-211ENST00000475728 LRRC37A3O60309 1634 aa19.62■□□□□ 0.73
ABCF3-211ENST00000475728 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
ABCF3-211ENST00000475728 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
ABCF3-211ENST00000475728 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
ABCF3-211ENST00000475728 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
ABCF3-211ENST00000475728 BAG6P46379 1132 aa19.6■□□□□ 0.73
ABCF3-211ENST00000475728 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
ABCF3-211ENST00000475728 BCL9O00512 1426 aa19.59■□□□□ 0.73
ABCF3-211ENST00000475728 MARCH10Q8NA82 808 aaPredicted RBP19.59■□□□□ 0.73
ABCF3-211ENST00000475728 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
ABCF3-211ENST00000475728 TRIM37O94972 964 aa19.57■□□□□ 0.72
ABCF3-211ENST00000475728 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
ABCF3-211ENST00000475728 USHBP1Q8N6Y0 703 aa19.57■□□□□ 0.72
ABCF3-211ENST00000475728 ZCRB1Q8TBF4 217 aaKnown RBP19.56■□□□□ 0.72
ABCF3-211ENST00000475728 RGPD1P0DJD0 1748 aa19.56■□□□□ 0.72
ABCF3-211ENST00000475728 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
ABCF3-211ENST00000475728 EYA1Q99502 592 aa19.55■□□□□ 0.72
ABCF3-211ENST00000475728 MTHFSP49914 203 aa19.54■□□□□ 0.72
ABCF3-211ENST00000475728 MEGF6O75095 1541 aa19.54■□□□□ 0.72
ABCF3-211ENST00000475728 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
ABCF3-211ENST00000475728 APBA3O96018 575 aa19.52■□□□□ 0.72
ABCF3-211ENST00000475728 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-211ENST00000475728 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms