RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
LTN1-204ENST00000475344 KCTD15Q96SI1 283 aaPredicted RBP10.43□□□□□ -0.74
LTN1-204ENST00000475344 SNRPBP14678 240 aaKnown RBP10.42□□□□□ -0.74
LTN1-204ENST00000475344 CDV3Q9UKY7 258 aaKnown RBP10.42□□□□□ -0.74
LTN1-204ENST00000475344 TRIM47Q96LD4 638 aa10.41□□□□□ -0.74
LTN1-204ENST00000475344 KLF16Q9BXK1 252 aaPredicted RBP10.41□□□□□ -0.74
LTN1-204ENST00000475344 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
LTN1-204ENST00000475344 ZBBXA8MT70 800 aa10.4□□□□□ -0.74
LTN1-204ENST00000475344 APBB1O00213 710 aa10.4□□□□□ -0.74
LTN1-204ENST00000475344 SCARF1Q14162 830 aa10.4□□□□□ -0.74
LTN1-204ENST00000475344 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
LTN1-204ENST00000475344 KIFC2Q96AC6 838 aa10.4□□□□□ -0.74
LTN1-204ENST00000475344 PURBQ96QR8 312 aaKnown RBP10.4□□□□□ -0.74
LTN1-204ENST00000475344 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
LTN1-204ENST00000475344 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
LTN1-204ENST00000475344 NBPF20Q3BBV1 942 aa10.39□□□□□ -0.75
LTN1-204ENST00000475344 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
LTN1-204ENST00000475344 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
LTN1-204ENST00000475344 PCDHB9Q9Y5E1 797 aa10.39□□□□□ -0.75
LTN1-204ENST00000475344 INTS6LQ5JSJ4 861 aaKnown RBP10.38□□□□□ -0.75
LTN1-204ENST00000475344 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
LTN1-204ENST00000475344 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
LTN1-204ENST00000475344 UPP2O95045 317 aa10.36□□□□□ -0.75
LTN1-204ENST00000475344 BMP2P12643 396 aa10.35□□□□□ -0.75
LTN1-204ENST00000475344 DHX9Q08211 1270 aaKnown RBP10.35□□□□□ -0.75
LTN1-204ENST00000475344 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
LTN1-204ENST00000475344 CBLBQ13191 982 aa10.34□□□□□ -0.75
LTN1-204ENST00000475344 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
LTN1-204ENST00000475344 SOCS7O14512 581 aa10.33□□□□□ -0.76
LTN1-204ENST00000475344 NR1H3Q13133 447 aa10.33□□□□□ -0.76
LTN1-204ENST00000475344 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
LTN1-204ENST00000475344 MEIOBQ8N635 442 aa10.33□□□□□ -0.76
LTN1-204ENST00000475344 PRM3Q9NNZ6 103 aa10.33□□□□□ -0.76
LTN1-204ENST00000475344 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
LTN1-204ENST00000475344 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
LTN1-204ENST00000475344 ERVH48-1M5A8F1 160 aa10.31□□□□□ -0.76
LTN1-204ENST00000475344 GPR37L1O60883 481 aa10.31□□□□□ -0.76
LTN1-204ENST00000475344 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
LTN1-204ENST00000475344 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
LTN1-204ENST00000475344 ABL2P42684 1182 aa10.29□□□□□ -0.76
LTN1-204ENST00000475344 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
LTN1-204ENST00000475344 AGBL1Q96MI9 1066 aa10.28□□□□□ -0.76
LTN1-204ENST00000475344 GDPD2Q9HCC8 539 aa10.28□□□□□ -0.76
LTN1-204ENST00000475344 ESPNB1AK53 854 aa10.27□□□□□ -0.77
LTN1-204ENST00000475344 MAN1A2O60476 641 aa10.27□□□□□ -0.77
LTN1-204ENST00000475344 RELBQ01201 579 aa10.27□□□□□ -0.77
LTN1-204ENST00000475344 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
LTN1-204ENST00000475344 MCM6Q14566 821 aa10.26□□□□□ -0.77
LTN1-204ENST00000475344 Q6ZVU0 165 aa10.26□□□□□ -0.77
LTN1-204ENST00000475344 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
LTN1-204ENST00000475344 WFS1O76024 890 aa10.24□□□□□ -0.77
LTN1-204ENST00000475344 VEGFBP49765 207 aa10.24□□□□□ -0.77
LTN1-204ENST00000475344 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
LTN1-204ENST00000475344 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
LTN1-204ENST00000475344 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
LTN1-204ENST00000475344 ZNF395Q9H8N7 513 aaPredicted RBP10.24□□□□□ -0.77
LTN1-204ENST00000475344 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
LTN1-204ENST00000475344 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
LTN1-204ENST00000475344 IRF5Q13568 498 aa10.23□□□□□ -0.77
LTN1-204ENST00000475344 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
LTN1-204ENST00000475344 FIGNL2A6NMB9 653 aa10.22□□□□□ -0.77
LTN1-204ENST00000475344 LILRA1O75019 489 aa10.22□□□□□ -0.77
LTN1-204ENST00000475344 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
LTN1-204ENST00000475344 NXF1Q9UBU9 619 aaKnown RBP10.22□□□□□ -0.77
LTN1-204ENST00000475344 TTLL8A6PVC2 850 aa10.21□□□□□ -0.77
LTN1-204ENST00000475344 ADH1AP07327 375 aa10.21□□□□□ -0.77
LTN1-204ENST00000475344 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
LTN1-204ENST00000475344 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
LTN1-204ENST00000475344 POLMQ9NP87 494 aaPredicted RBP10.21□□□□□ -0.77
LTN1-204ENST00000475344 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
LTN1-204ENST00000475344 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
LTN1-204ENST00000475344 SOS2Q07890 1332 aaPredicted RBP10.21□□□□□ -0.78
LTN1-204ENST00000475344 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
LTN1-204ENST00000475344 INSM2Q96T92 566 aaPredicted RBP10.2□□□□□ -0.78
LTN1-204ENST00000475344 SPINT1O43278 529 aa10.19□□□□□ -0.78
LTN1-204ENST00000475344 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
LTN1-204ENST00000475344 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
LTN1-204ENST00000475344 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
LTN1-204ENST00000475344 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
LTN1-204ENST00000475344 CEP126Q9P2H0 1117 aa10.18□□□□□ -0.78
LTN1-204ENST00000475344 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
LTN1-204ENST00000475344 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
LTN1-204ENST00000475344 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
LTN1-204ENST00000475344 PTGIRP43119 386 aa10.16□□□□□ -0.78
LTN1-204ENST00000475344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.16□□□□□ -0.78
LTN1-204ENST00000475344 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
LTN1-204ENST00000475344 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
LTN1-204ENST00000475344 SCTRP47872 440 aa10.15□□□□□ -0.78
LTN1-204ENST00000475344 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
LTN1-204ENST00000475344 CCDC125Q86Z20 511 aa10.15□□□□□ -0.78
LTN1-204ENST00000475344 MEN1O00255 615 aa10.14□□□□□ -0.79
LTN1-204ENST00000475344 RAD21O60216 631 aa10.14□□□□□ -0.79
LTN1-204ENST00000475344 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
LTN1-204ENST00000475344 FLIIQ13045 1269 aa10.14□□□□□ -0.79
LTN1-204ENST00000475344 SLFNL1Q499Z3 407 aa10.14□□□□□ -0.79
LTN1-204ENST00000475344 KDF1Q8NAX2 398 aaPredicted RBP10.14□□□□□ -0.79
LTN1-204ENST00000475344 SEMA3FQ13275 785 aa10.13□□□□□ -0.79
LTN1-204ENST00000475344 LCE2AQ5TA79 106 aaPredicted RBP10.13□□□□□ -0.79
LTN1-204ENST00000475344 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
LTN1-204ENST00000475344 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms