RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 KIAA0232Q92628 1395 aa28.25■■■□□ 2.11
COCH-205ENST00000475087 IL13P35225 146 aa28.23■■■□□ 2.11
COCH-205ENST00000475087 NUDCQ9Y266 331 aa28.23■■■□□ 2.11
COCH-205ENST00000475087 WDR43Q15061 677 aaKnown RBP eCLIP28.22■■■□□ 2.11
COCH-205ENST00000475087 EIF4A2Q14240 407 aaKnown RBP28.22■■■□□ 2.11
COCH-205ENST00000475087 PRDM11Q9NQV5 511 aa28.2■■■□□ 2.11
COCH-205ENST00000475087 AXIN2Q9Y2T1 843 aa28.2■■■□□ 2.11
COCH-205ENST00000475087 ABCC6O95255 1503 aa28.2■■■□□ 2.11
COCH-205ENST00000475087 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.1
COCH-205ENST00000475087 ADAMTS8Q9UP79 889 aa28.2■■■□□ 2.1
COCH-205ENST00000475087 COL18A1P39060 1754 aa28.19■■■□□ 2.1
COCH-205ENST00000475087 CHRNA2Q15822 529 aa28.19■■■□□ 2.1
COCH-205ENST00000475087 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
COCH-205ENST00000475087 FAM83GA6ND36 823 aa28.15■■■□□ 2.1
COCH-205ENST00000475087 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
COCH-205ENST00000475087 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
COCH-205ENST00000475087 SPATA31A6Q5VVP1 1343 aa28.15■■■□□ 2.1
COCH-205ENST00000475087 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
COCH-205ENST00000475087 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
COCH-205ENST00000475087 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
COCH-205ENST00000475087 FBXO41Q8TF61 875 aa28.14■■■□□ 2.1
COCH-205ENST00000475087 LTV1Q96GA3 475 aaPredicted RBP28.13■■■□□ 2.09
COCH-205ENST00000475087 LMO7Q8WWI1 1683 aa28.13■■■□□ 2.09
COCH-205ENST00000475087 ANKRD24Q8TF21 1146 aa28.12■■■□□ 2.09
COCH-205ENST00000475087 RGPD5Q99666 1765 aa28.11■■■□□ 2.09
COCH-205ENST00000475087 ERBB3P21860 1342 aa28.11■■■□□ 2.09
COCH-205ENST00000475087 ADAMTS2O95450 1211 aa28.11■■■□□ 2.09
COCH-205ENST00000475087 CAMTA1Q9Y6Y1 1673 aa28.1■■■□□ 2.09
COCH-205ENST00000475087 EYA1Q99502 592 aa28.1■■■□□ 2.09
COCH-205ENST00000475087 RGPD1P0DJD0 1748 aa28.1■■■□□ 2.09
COCH-205ENST00000475087 COL14A1Q05707 1796 aaKnown RBP28.09■■■□□ 2.09
COCH-205ENST00000475087 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
COCH-205ENST00000475087 FCHSD2O94868 740 aa28.07■■■□□ 2.08
COCH-205ENST00000475087 HMOX1P09601 288 aa28.05■■■□□ 2.08
COCH-205ENST00000475087 NBPF6Q5VWK0 638 aa28.05■■■□□ 2.08
COCH-205ENST00000475087 NBPF4Q96M43 638 aa28.05■■■□□ 2.08
COCH-205ENST00000475087 RSPH6AQ9H0K4 717 aa28.05■■■□□ 2.08
COCH-205ENST00000475087 COL5A2P05997 1499 aaPredicted RBP28.05■■■□□ 2.08
COCH-205ENST00000475087 SULT6B1Q6IMI4 303 aa28.04■■■□□ 2.08
COCH-205ENST00000475087 LRP6O75581 1613 aa28.04■■■□□ 2.08
COCH-205ENST00000475087 BTG4Q9NY30 223 aa28.04■■■□□ 2.08
COCH-205ENST00000475087 PNNQ9H307 717 aaKnown RBP28.03■■■□□ 2.08
COCH-205ENST00000475087 KDRP35968 1356 aa28.03■■■□□ 2.08
COCH-205ENST00000475087 AEBP1Q8IUX7 1158 aa28.02■■■□□ 2.08
COCH-205ENST00000475087 CCDC146Q8IYE0 955 aa28.02■■■□□ 2.08
COCH-205ENST00000475087 PLEKHF1Q96S99 279 aa28.02■■■□□ 2.08
COCH-205ENST00000475087 WDR17Q8IZU2 1322 aa28.02■■■□□ 2.08
COCH-205ENST00000475087 CSB-PGBD3P0DP91 1061 aa28.01■■■□□ 2.07
COCH-205ENST00000475087 RUNDC1Q96C34 613 aa28.01■■■□□ 2.07
COCH-205ENST00000475087 YTHDC1Q96MU7 727 aaKnown RBP28.01■■■□□ 2.07
COCH-205ENST00000475087 NCAPD2Q15021 1401 aa28■■■□□ 2.07
COCH-205ENST00000475087 EVA1CP58658 441 aa28■■■□□ 2.07
COCH-205ENST00000475087 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
COCH-205ENST00000475087 PRKAR2BP31323 418 aa27.99■■■□□ 2.07
COCH-205ENST00000475087 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
COCH-205ENST00000475087 NLRP2Q9NX02 1062 aa27.99■■■□□ 2.07
COCH-205ENST00000475087 PLCH1Q4KWH8 1693 aa27.98■■■□□ 2.07
COCH-205ENST00000475087 USHBP1Q8N6Y0 703 aa27.98■■■□□ 2.07
COCH-205ENST00000475087 STRN4Q9NRL3 753 aa27.98■■■□□ 2.07
COCH-205ENST00000475087 SLIT2O94813 1529 aa27.97■■■□□ 2.07
COCH-205ENST00000475087 HNRNPUQ00839 825 aaKnown RBP eCLIP27.97■■■□□ 2.07
COCH-205ENST00000475087 C8orf37Q96NL8 207 aa27.96■■■□□ 2.07
COCH-205ENST00000475087 LARP1Q6PKG0 1096 aaKnown RBP27.95■■■□□ 2.07
COCH-205ENST00000475087 TOM1L2Q6ZVM7 507 aa27.95■■■□□ 2.07
COCH-205ENST00000475087 NGLY1Q96IV0 654 aa27.95■■■□□ 2.07
COCH-205ENST00000475087 NWD2Q9ULI1 1742 aa27.94■■■□□ 2.06
COCH-205ENST00000475087 APAF1O14727 1248 aa27.93■■■□□ 2.06
COCH-205ENST00000475087 MAPK8IP3Q9UPT6 1336 aa27.93■■■□□ 2.06
COCH-205ENST00000475087 FNBP4Q8N3X1 1017 aaPredicted RBP27.93■■■□□ 2.06
COCH-205ENST00000475087 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
COCH-205ENST00000475087 PHACTR3Q96KR7 559 aa27.93■■■□□ 2.06
COCH-205ENST00000475087 CARD10Q9BWT7 1032 aa27.93■■■□□ 2.06
COCH-205ENST00000475087 CRB1P82279 1406 aa27.92■■■□□ 2.06
COCH-205ENST00000475087 NEFMP07197 916 aa27.92■■■□□ 2.06
COCH-205ENST00000475087 MEX3CQ5U5Q3 659 aaKnown RBP27.92■■■□□ 2.06
COCH-205ENST00000475087 NRAPQ86VF7 1730 aa27.92■■■□□ 2.06
COCH-205ENST00000475087 SENP3-EIF4A1A0A087X0R7 540 aa27.9■■■□□ 2.06
COCH-205ENST00000475087 BCL9LQ86UU0 1499 aa27.89■■■□□ 2.05
COCH-205ENST00000475087 UNC5CLQ8IV45 518 aa27.88■■■□□ 2.05
COCH-205ENST00000475087 TMPOP42166 694 aaKnown RBP27.86■■■□□ 2.05
COCH-205ENST00000475087 NGEFQ8N5V2 710 aa27.86■■■□□ 2.05
COCH-205ENST00000475087 NCBP3Q53F19 620 aaKnown RBP27.85■■■□□ 2.05
COCH-205ENST00000475087 RAPGEF4Q8WZA2 1011 aa27.85■■■□□ 2.05
COCH-205ENST00000475087 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
COCH-205ENST00000475087 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
COCH-205ENST00000475087 USP21Q9UK80 565 aa27.84■■■□□ 2.05
COCH-205ENST00000475087 RRP7AQ9Y3A4 280 aaKnown RBP27.84■■■□□ 2.05
COCH-205ENST00000475087 ZBED9Q6R2W3 1325 aa27.84■■■□□ 2.05
COCH-205ENST00000475087 NEUROD2Q15784 382 aa27.82■■■□□ 2.04
COCH-205ENST00000475087 PLEKHG2Q9H7P9 1386 aa27.82■■■□□ 2.04
COCH-205ENST00000475087 AFF2P51816 1311 aa27.82■■■□□ 2.04
COCH-205ENST00000475087 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
COCH-205ENST00000475087 USP35Q9P2H5 1018 aa27.82■■■□□ 2.04
COCH-205ENST00000475087 MEGF6O75095 1541 aa27.81■■■□□ 2.04
COCH-205ENST00000475087 SPATA31A1Q5TZJ5 1347 aa27.81■■■□□ 2.04
COCH-205ENST00000475087 TATP17735 454 aaPredicted RBP27.81■■■□□ 2.04
COCH-205ENST00000475087 SPATA31A5Q5VU36 1347 aa27.81■■■□□ 2.04
COCH-205ENST00000475087 SPATA31A7Q8IWB4 1347 aa27.81■■■□□ 2.04
COCH-205ENST00000475087 VPS72Q15906 364 aa27.8■■■□□ 2.04
COCH-205ENST00000475087 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms