RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CLUAP1Q96AJ1 413 aa8□□□□□ -1.13
SMARCE1-208ENST00000474246 GPR162Q16538 588 aa7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 POTEGQ6S5H5 508 aa7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 APBB1IPQ7Z5R6 666 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 CCDC97Q96F63 343 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 HIRIP3Q9BW71 556 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 ATP7AQ04656 1500 aa7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 DRC1Q96MC2 740 aa7.99□□□□□ -1.13
SMARCE1-208ENST00000474246 FAM135AQ9P2D6 1515 aa7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 TSHZ1Q6ZSZ6 1077 aa7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 GJD4Q96KN9 370 aaPredicted RBP7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 ATP10DQ9P241 1426 aa7.98□□□□□ -1.13
SMARCE1-208ENST00000474246 SYT17Q9BSW7 474 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 DISP2A7MBM2 1401 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 ZMYND10O75800 440 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 ATN1P54259 1190 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 PROSER2Q86WR7 435 aaPredicted RBP7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 GCC1Q96CN9 775 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 UBA5Q9GZZ9 404 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 SLC52A1Q9NWF4 448 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 DLC1Q96QB1 1528 aa7.97□□□□□ -1.13
SMARCE1-208ENST00000474246 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 AXDND1Q5T1B0 1012 aaPredicted RBP7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 RBM26Q5T8P6 1007 aaKnown RBP7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 RINLQ6ZS11 566 aa7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 KCNV2Q8TDN2 545 aa7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 MICAL1Q8TDZ2 1067 aa7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 LRRC59Q96AG4 307 aaKnown RBP7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 ABHD8Q96I13 439 aa7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 PARD3Q8TEW0 1356 aa7.96□□□□□ -1.13
SMARCE1-208ENST00000474246 DIP2AQ14689 1571 aa7.96□□□□□ -1.14
SMARCE1-208ENST00000474246 SIRT1Q96EB6 747 aa7.96□□□□□ -1.14
SMARCE1-208ENST00000474246 ARIH1Q9Y4X5 557 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1-208ENST00000474246 MYBPC2Q14324 1141 aa7.95□□□□□ -1.14
SMARCE1-208ENST00000474246 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
SMARCE1-208ENST00000474246 UGGT2Q9NYU1 1516 aa7.95□□□□□ -1.14
SMARCE1-208ENST00000474246 DPY19L2Q6NUT2 758 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 SETD5Q9C0A6 1442 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 ATMINO43313 823 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 MMP14P50281 582 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 MORC4Q8TE76 937 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 OTUD5Q96G74 571 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 DIP2CQ9Y2E4 1556 aa7.94□□□□□ -1.14
SMARCE1-208ENST00000474246 ADGBQ8N7X0 1667 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 TESPA1A2RU30 521 aaPredicted RBP7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 TTC36A6NLP5 189 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 ADAMTS2O95450 1211 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 CLCN6P51797 869 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 MAP3K1Q13233 1512 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 ZNF518AQ6AHZ1 1483 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 CASC1Q6TDU7 716 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 MTA3Q9BTC8 594 aa7.93□□□□□ -1.14
SMARCE1-208ENST00000474246 TNRQ92752 1358 aa7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 WDR90Q96KV7 1748 aa7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 CALRP27797 417 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 LONRF3Q496Y0 759 aa7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 NBPF11Q86T75 865 aa7.92□□□□□ -1.14
SMARCE1-208ENST00000474246 EZH2Q15910 746 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 SREK1Q8WXA9 508 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 FHDC1Q9C0D6 1143 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 PTCH1Q13635 1447 aa7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 KCNA6P17658 529 aa7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 KCNA1Q09470 495 aa7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 LARP6Q9BRS8 491 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-208ENST00000474246 TSR1Q2NL82 804 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-208ENST00000474246 KRBA2Q6ZNG9 492 aa7.9□□□□□ -1.14
SMARCE1-208ENST00000474246 BIVM-ERCC5R4GMW8 1640 aa7.9□□□□□ -1.14
SMARCE1-208ENST00000474246 TIAM1Q13009 1591 aa7.9□□□□□ -1.15
SMARCE1-208ENST00000474246 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.15
SMARCE1-208ENST00000474246 TOMM70O94826 608 aa7.9□□□□□ -1.15
SMARCE1-208ENST00000474246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.9□□□□□ -1.15
SMARCE1-208ENST00000474246 CCDC85CA6NKD9 419 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 GRIN3BO60391 1043 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 RAB11FIP3O75154 756 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 PDCD7Q8N8D1 485 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 ANP32BQ92688 251 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 NRKQ7Z2Y5 1582 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 ITSN2Q9NZM3 1697 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
SMARCE1-208ENST00000474246 ANP32CO43423 234 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 SEPT12Q8IYM1 358 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 SDR16C5Q8N3Y7 309 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 SLC17A8Q8NDX2 589 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 CAMKK2Q96RR4 588 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 UGGT1Q9NYU2 1555 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 NLRP1Q9C000 1473 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 PDE4AP27815 886 aa7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 IRX5P78411 483 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 FOXD4Q12950 439 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 CEP120Q8N960 986 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms