RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
VAMP4-203ENST00000474047 NFAT5O94916 1531 aa19.63■□□□□ 0.73
VAMP4-203ENST00000474047 FYB1O15117 783 aa19.63■□□□□ 0.73
VAMP4-203ENST00000474047 USP54Q70EL1 1684 aa19.62■□□□□ 0.73
VAMP4-203ENST00000474047 OVOS2A0A0J9YW53 1432 aa19.62■□□□□ 0.73
VAMP4-203ENST00000474047 OVOS2Q6IE36 1432 aa19.62■□□□□ 0.73
VAMP4-203ENST00000474047 MYOM1P52179 1685 aa19.62■□□□□ 0.73
VAMP4-203ENST00000474047 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
VAMP4-203ENST00000474047 THRAP3Q9Y2W1 955 aaKnown RBP19.61■□□□□ 0.73
VAMP4-203ENST00000474047 CRB1P82279 1406 aa19.61■□□□□ 0.73
VAMP4-203ENST00000474047 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
VAMP4-203ENST00000474047 BRWD3Q6RI45 1802 aa19.61■□□□□ 0.73
VAMP4-203ENST00000474047 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
VAMP4-203ENST00000474047 WDR17Q8IZU2 1322 aa19.6■□□□□ 0.73
VAMP4-203ENST00000474047 COL18A1P39060 1754 aa19.6■□□□□ 0.73
VAMP4-203ENST00000474047 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
VAMP4-203ENST00000474047 AMPHP49418 695 aa19.59■□□□□ 0.73
VAMP4-203ENST00000474047 RGPD5Q99666 1765 aa19.59■□□□□ 0.73
VAMP4-203ENST00000474047 LTN1O94822 1766 aa19.58■□□□□ 0.73
VAMP4-203ENST00000474047 C11orf95C9JLR9 678 aaPredicted RBP19.58■□□□□ 0.72
VAMP4-203ENST00000474047 PANK3Q9H999 370 aa19.58■□□□□ 0.72
VAMP4-203ENST00000474047 PDE3BQ13370 1112 aa19.57■□□□□ 0.72
VAMP4-203ENST00000474047 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
VAMP4-203ENST00000474047 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
VAMP4-203ENST00000474047 ABCC6O95255 1503 aa19.56■□□□□ 0.72
VAMP4-203ENST00000474047 FBLN1P23142 703 aa19.56■□□□□ 0.72
VAMP4-203ENST00000474047 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
VAMP4-203ENST00000474047 IP6K1Q92551 441 aa19.56■□□□□ 0.72
VAMP4-203ENST00000474047 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
VAMP4-203ENST00000474047 ANKRD24Q8TF21 1146 aa19.55■□□□□ 0.72
VAMP4-203ENST00000474047 LTV1Q96GA3 475 aaPredicted RBP19.55■□□□□ 0.72
VAMP4-203ENST00000474047 CARD10Q9BWT7 1032 aa19.55■□□□□ 0.72
VAMP4-203ENST00000474047 MAP3K19Q56UN5 1328 aa19.54■□□□□ 0.72
VAMP4-203ENST00000474047 THSD7AQ9UPZ6 1657 aa19.54■□□□□ 0.72
VAMP4-203ENST00000474047 KIF7Q2M1P5 1343 aa19.54■□□□□ 0.72
VAMP4-203ENST00000474047 RRS1Q15050 365 aaKnown RBP19.54■□□□□ 0.72
VAMP4-203ENST00000474047 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
VAMP4-203ENST00000474047 ERBB3P21860 1342 aa19.52■□□□□ 0.72
VAMP4-203ENST00000474047 CDCA7Q9BWT1 371 aaPredicted RBP19.52■□□□□ 0.72
VAMP4-203ENST00000474047 BLMP54132 1417 aaPredicted RBP19.52■□□□□ 0.71
VAMP4-203ENST00000474047 HOXC9P31274 260 aa19.51■□□□□ 0.71
VAMP4-203ENST00000474047 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
VAMP4-203ENST00000474047 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
VAMP4-203ENST00000474047 DDB1Q16531 1140 aa19.51■□□□□ 0.71
VAMP4-203ENST00000474047 FAM196AQ6ZSG2 479 aa19.5■□□□□ 0.71
VAMP4-203ENST00000474047 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
VAMP4-203ENST00000474047 TNNT2P45379 298 aaPredicted RBP19.48■□□□□ 0.71
VAMP4-203ENST00000474047 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
VAMP4-203ENST00000474047 EXOC5O00471 708 aa19.47■□□□□ 0.71
VAMP4-203ENST00000474047 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
VAMP4-203ENST00000474047 PARP4Q9UKK3 1724 aaKnown RBP19.45■□□□□ 0.7
VAMP4-203ENST00000474047 IL2RBP14784 551 aa19.45■□□□□ 0.7
VAMP4-203ENST00000474047 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
VAMP4-203ENST00000474047 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
VAMP4-203ENST00000474047 FLT4P35916 1363 aa19.44■□□□□ 0.7
VAMP4-203ENST00000474047 TRIM37O94972 964 aa19.43■□□□□ 0.7
VAMP4-203ENST00000474047 BAG6P46379 1132 aa19.43■□□□□ 0.7
VAMP4-203ENST00000474047 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
VAMP4-203ENST00000474047 NSD2O96028 1365 aa19.43■□□□□ 0.7
VAMP4-203ENST00000474047 KIF24Q5T7B8 1368 aa19.42■□□□□ 0.7
VAMP4-203ENST00000474047 DEFB132Q7Z7B7 95 aa19.42■□□□□ 0.7
VAMP4-203ENST00000474047 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
VAMP4-203ENST00000474047 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
VAMP4-203ENST00000474047 FAM208AQ9UK61 1670 aaKnown RBP19.41■□□□□ 0.7
VAMP4-203ENST00000474047 INSRP06213 1382 aa19.41■□□□□ 0.7
VAMP4-203ENST00000474047 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
VAMP4-203ENST00000474047 LRRC37A3O60309 1634 aa19.4■□□□□ 0.7
VAMP4-203ENST00000474047 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
VAMP4-203ENST00000474047 DISP2A7MBM2 1401 aa19.4■□□□□ 0.7
VAMP4-203ENST00000474047 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
VAMP4-203ENST00000474047 POLKQ9UBT6 870 aa19.39■□□□□ 0.7
VAMP4-203ENST00000474047 EP400Q96L91 3159 aa19.39■□□□□ 0.69
VAMP4-203ENST00000474047 MARCH10Q8NA82 808 aaPredicted RBP19.39■□□□□ 0.69
VAMP4-203ENST00000474047 APBA3O96018 575 aa19.38■□□□□ 0.69
VAMP4-203ENST00000474047 NBPF6Q5VWK0 638 aa19.38■□□□□ 0.69
VAMP4-203ENST00000474047 NBPF4Q96M43 638 aa19.38■□□□□ 0.69
VAMP4-203ENST00000474047 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
VAMP4-203ENST00000474047 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
VAMP4-203ENST00000474047 USHBP1Q8N6Y0 703 aa19.37■□□□□ 0.69
VAMP4-203ENST00000474047 PEAK1Q9H792 1746 aa19.37■□□□□ 0.69
VAMP4-203ENST00000474047 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
VAMP4-203ENST00000474047 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
VAMP4-203ENST00000474047 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
VAMP4-203ENST00000474047 TNS2Q63HR2 1409 aa19.36■□□□□ 0.69
VAMP4-203ENST00000474047 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
VAMP4-203ENST00000474047 EN1Q05925 392 aaPredicted RBP19.35■□□□□ 0.69
VAMP4-203ENST00000474047 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
VAMP4-203ENST00000474047 PER1O15534 1290 aaPredicted RBP19.34■□□□□ 0.69
VAMP4-203ENST00000474047 TATP17735 454 aaPredicted RBP19.34■□□□□ 0.69
VAMP4-203ENST00000474047 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
VAMP4-203ENST00000474047 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
VAMP4-203ENST00000474047 BCL11BQ9C0K0 894 aaPredicted RBP19.31■□□□□ 0.68
VAMP4-203ENST00000474047 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
VAMP4-203ENST00000474047 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
VAMP4-203ENST00000474047 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
VAMP4-203ENST00000474047 EZH2Q15910 746 aaKnown RBP19.29■□□□□ 0.68
VAMP4-203ENST00000474047 ACSBG1Q96GR2 724 aa19.29■□□□□ 0.68
VAMP4-203ENST00000474047 EYA1Q99502 592 aa19.28■□□□□ 0.68
VAMP4-203ENST00000474047 BCL9O00512 1426 aa19.28■□□□□ 0.68
VAMP4-203ENST00000474047 MEGF6O75095 1541 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms