RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
LINC00888-202ENST00000471496 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
LINC00888-202ENST00000471496 USP21Q9UK80 565 aa17.31■□□□□ 0.36
LINC00888-202ENST00000471496 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
LINC00888-202ENST00000471496 ATRNO75882 1429 aa17.31■□□□□ 0.36
LINC00888-202ENST00000471496 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
LINC00888-202ENST00000471496 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
LINC00888-202ENST00000471496 MIER1Q8N108 512 aa17.31■□□□□ 0.36
LINC00888-202ENST00000471496 GABBR2O75899 941 aa17.3■□□□□ 0.36
LINC00888-202ENST00000471496 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
LINC00888-202ENST00000471496 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
LINC00888-202ENST00000471496 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
LINC00888-202ENST00000471496 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
LINC00888-202ENST00000471496 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
LINC00888-202ENST00000471496 NLRP6P59044 892 aa17.29■□□□□ 0.36
LINC00888-202ENST00000471496 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
LINC00888-202ENST00000471496 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
LINC00888-202ENST00000471496 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
LINC00888-202ENST00000471496 GCP02774 474 aa17.28■□□□□ 0.36
LINC00888-202ENST00000471496 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
LINC00888-202ENST00000471496 CPDO75976 1380 aa17.27■□□□□ 0.36
LINC00888-202ENST00000471496 USP31Q70CQ4 1352 aa17.27■□□□□ 0.36
LINC00888-202ENST00000471496 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
LINC00888-202ENST00000471496 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
LINC00888-202ENST00000471496 COL18A1P39060 1754 aa17.27■□□□□ 0.35
LINC00888-202ENST00000471496 NFAT5O94916 1531 aa17.27■□□□□ 0.35
LINC00888-202ENST00000471496 GLI3P10071 1580 aa17.26■□□□□ 0.35
LINC00888-202ENST00000471496 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
LINC00888-202ENST00000471496 NME9Q86XW9 330 aa17.26■□□□□ 0.35
LINC00888-202ENST00000471496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00888-202ENST00000471496 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
LINC00888-202ENST00000471496 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
LINC00888-202ENST00000471496 RXRBP28702 533 aa17.25■□□□□ 0.35
LINC00888-202ENST00000471496 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
LINC00888-202ENST00000471496 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
LINC00888-202ENST00000471496 BTG4Q9NY30 223 aa17.24■□□□□ 0.35
LINC00888-202ENST00000471496 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
LINC00888-202ENST00000471496 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
LINC00888-202ENST00000471496 PLCD3Q8N3E9 789 aa17.23■□□□□ 0.35
LINC00888-202ENST00000471496 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
LINC00888-202ENST00000471496 RGS12O14924 1447 aa17.22■□□□□ 0.35
LINC00888-202ENST00000471496 LTN1O94822 1766 aa17.21■□□□□ 0.35
LINC00888-202ENST00000471496 VPS72Q15906 364 aa17.21■□□□□ 0.35
LINC00888-202ENST00000471496 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
LINC00888-202ENST00000471496 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
LINC00888-202ENST00000471496 SOCS7O14512 581 aa17.2■□□□□ 0.34
LINC00888-202ENST00000471496 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
LINC00888-202ENST00000471496 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
LINC00888-202ENST00000471496 KCNH5Q8NCM2 988 aa17.19■□□□□ 0.34
LINC00888-202ENST00000471496 FYB1O15117 783 aa17.18■□□□□ 0.34
LINC00888-202ENST00000471496 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
LINC00888-202ENST00000471496 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
LINC00888-202ENST00000471496 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
LINC00888-202ENST00000471496 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
LINC00888-202ENST00000471496 COL5A2P05997 1499 aaPredicted RBP17.17■□□□□ 0.34
LINC00888-202ENST00000471496 SOX12O15370 315 aa17.17■□□□□ 0.34
LINC00888-202ENST00000471496 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
LINC00888-202ENST00000471496 ABCC6O95255 1503 aa17.16■□□□□ 0.34
LINC00888-202ENST00000471496 SPATA31A5Q5VU36 1347 aa17.15■□□□□ 0.34
LINC00888-202ENST00000471496 SPATA31A7Q8IWB4 1347 aa17.15■□□□□ 0.34
LINC00888-202ENST00000471496 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
LINC00888-202ENST00000471496 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
LINC00888-202ENST00000471496 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
LINC00888-202ENST00000471496 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
LINC00888-202ENST00000471496 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
LINC00888-202ENST00000471496 SPATA31A1Q5TZJ5 1347 aa17.13■□□□□ 0.33
LINC00888-202ENST00000471496 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
LINC00888-202ENST00000471496 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
LINC00888-202ENST00000471496 COG3Q96JB2 828 aa17.12■□□□□ 0.33
LINC00888-202ENST00000471496 PANK3Q9H999 370 aa17.12■□□□□ 0.33
LINC00888-202ENST00000471496 EP400Q96L91 3159 aa17.12■□□□□ 0.33
LINC00888-202ENST00000471496 FBLN1P23142 703 aa17.12■□□□□ 0.33
LINC00888-202ENST00000471496 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
LINC00888-202ENST00000471496 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
LINC00888-202ENST00000471496 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
LINC00888-202ENST00000471496 EVA1CP58658 441 aa17.1■□□□□ 0.33
LINC00888-202ENST00000471496 WNK3Q9BYP7 1800 aa17.09■□□□□ 0.33
LINC00888-202ENST00000471496 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.33
LINC00888-202ENST00000471496 CRB1P82279 1406 aa17.08■□□□□ 0.33
LINC00888-202ENST00000471496 PEAK1Q9H792 1746 aa17.08■□□□□ 0.33
LINC00888-202ENST00000471496 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
LINC00888-202ENST00000471496 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
LINC00888-202ENST00000471496 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.32
LINC00888-202ENST00000471496 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
LINC00888-202ENST00000471496 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
LINC00888-202ENST00000471496 IP6K1Q92551 441 aa17.05■□□□□ 0.32
LINC00888-202ENST00000471496 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
LINC00888-202ENST00000471496 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
LINC00888-202ENST00000471496 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
LINC00888-202ENST00000471496 ERBB3P21860 1342 aa17.05■□□□□ 0.32
LINC00888-202ENST00000471496 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
LINC00888-202ENST00000471496 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
LINC00888-202ENST00000471496 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
LINC00888-202ENST00000471496 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
LINC00888-202ENST00000471496 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms