RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 TCP11L2Q8N4U5 519 aa29.51■■■□□ 2.31
SREBF1-210ENST00000471445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.5■■■□□ 2.31
SREBF1-210ENST00000471445 TERF2IPQ9NYB0 399 aa29.5■■■□□ 2.31
SREBF1-210ENST00000471445 THRAP3Q9Y2W1 955 aaKnown RBP29.5■■■□□ 2.31
SREBF1-210ENST00000471445 LRRC37A3O60309 1634 aa29.49■■■□□ 2.31
SREBF1-210ENST00000471445 OVOS2A0A0J9YW53 1432 aa29.49■■■□□ 2.31
SREBF1-210ENST00000471445 OVOS2Q6IE36 1432 aa29.49■■■□□ 2.31
SREBF1-210ENST00000471445 SF3B2Q13435 895 aaKnown RBP29.48■■■□□ 2.31
SREBF1-210ENST00000471445 NME9Q86XW9 330 aa29.48■■■□□ 2.31
SREBF1-210ENST00000471445 ZRANB1Q9UGI0 708 aa29.48■■■□□ 2.31
SREBF1-210ENST00000471445 DEFB132Q7Z7B7 95 aa29.47■■■□□ 2.31
SREBF1-210ENST00000471445 SOX12O15370 315 aa29.46■■■□□ 2.31
SREBF1-210ENST00000471445 FAM182BQ5T319 152 aa29.46■■■□□ 2.31
SREBF1-210ENST00000471445 AXIN2Q9Y2T1 843 aa29.46■■■□□ 2.31
SREBF1-210ENST00000471445 WDR17Q8IZU2 1322 aa29.45■■■□□ 2.3
SREBF1-210ENST00000471445 MYOM1P52179 1685 aa29.44■■■□□ 2.3
SREBF1-210ENST00000471445 ANKRD36BQ8N2N9 1353 aa29.43■■■□□ 2.3
SREBF1-210ENST00000471445 TMF1P82094 1093 aa29.43■■■□□ 2.3
SREBF1-210ENST00000471445 DISP2A7MBM2 1401 aa29.43■■■□□ 2.3
SREBF1-210ENST00000471445 PEAK1Q9H792 1746 aa29.42■■■□□ 2.3
SREBF1-210ENST00000471445 TOM1L2Q6ZVM7 507 aa29.4■■■□□ 2.3
SREBF1-210ENST00000471445 BAG6P46379 1132 aa29.39■■■□□ 2.3
SREBF1-210ENST00000471445 FAM196AQ6ZSG2 479 aa29.38■■■□□ 2.29
SREBF1-210ENST00000471445 PDE3BQ13370 1112 aa29.37■■■□□ 2.29
SREBF1-210ENST00000471445 KIF20BQ96Q89 1820 aa29.36■■■□□ 2.29
SREBF1-210ENST00000471445 SBF2Q86WG5 1849 aa29.35■■■□□ 2.29
SREBF1-210ENST00000471445 FAM208AQ9UK61 1670 aaKnown RBP29.34■■■□□ 2.29
SREBF1-210ENST00000471445 CARD10Q9BWT7 1032 aa29.33■■■□□ 2.29
SREBF1-210ENST00000471445 OVOS2A0A0G2JMS6 1433 aa29.32■■■□□ 2.28
SREBF1-210ENST00000471445 CCDC7Q96M83 1385 aa29.32■■■□□ 2.28
SREBF1-210ENST00000471445 ERBB3P21860 1342 aa29.32■■■□□ 2.28
SREBF1-210ENST00000471445 CDCA8Q53HL2 280 aa29.32■■■□□ 2.28
SREBF1-210ENST00000471445 CCER1Q8TC90 406 aaPredicted RBP29.32■■■□□ 2.28
SREBF1-210ENST00000471445 RREB1Q92766 1687 aa29.31■■■□□ 2.28
SREBF1-210ENST00000471445 CSB-PGBD3P0DP91 1061 aa29.31■■■□□ 2.28
SREBF1-210ENST00000471445 TRIM37O94972 964 aa29.3■■■□□ 2.28
SREBF1-210ENST00000471445 EN1Q05925 392 aaPredicted RBP29.29■■■□□ 2.28
SREBF1-210ENST00000471445 CDCA7Q9BWT1 371 aaPredicted RBP29.29■■■□□ 2.28
SREBF1-210ENST00000471445 DDB1Q16531 1140 aa29.28■■■□□ 2.28
SREBF1-210ENST00000471445 COG3Q96JB2 828 aa29.27■■■□□ 2.28
SREBF1-210ENST00000471445 TNS2Q63HR2 1409 aa29.26■■■□□ 2.27
SREBF1-210ENST00000471445 RGPD3A6NKT7 1758 aaPredicted RBP29.26■■■□□ 2.27
SREBF1-210ENST00000471445 RGPD4Q7Z3J3 1758 aa29.26■■■□□ 2.27
SREBF1-210ENST00000471445 SRCAPQ6ZRS2 3230 aa29.26■■■□□ 2.27
SREBF1-210ENST00000471445 NUP188Q5SRE5 1749 aa29.25■■■□□ 2.27
SREBF1-210ENST00000471445 C11orf95C9JLR9 678 aaPredicted RBP29.25■■■□□ 2.27
SREBF1-210ENST00000471445 PARD3Q8TEW0 1356 aa29.25■■■□□ 2.27
SREBF1-210ENST00000471445 BCL9O00512 1426 aa29.23■■■□□ 2.27
SREBF1-210ENST00000471445 ANKRD24Q8TF21 1146 aa29.22■■■□□ 2.27
SREBF1-210ENST00000471445 EZH2Q15910 746 aaKnown RBP29.21■■■□□ 2.27
SREBF1-210ENST00000471445 CAMKK2Q96RR4 588 aa29.21■■■□□ 2.27
SREBF1-210ENST00000471445 MAP3K19Q56UN5 1328 aa29.2■■■□□ 2.27
SREBF1-210ENST00000471445 FYB1O15117 783 aa29.2■■■□□ 2.26
SREBF1-210ENST00000471445 IP6K1Q92551 441 aa29.2■■■□□ 2.26
SREBF1-210ENST00000471445 RGPD2P0DJD1 1756 aa29.19■■■□□ 2.26
SREBF1-210ENST00000471445 RTL1A6NKG5 1358 aa29.19■■■□□ 2.26
SREBF1-210ENST00000471445 APBA3O96018 575 aa29.19■■■□□ 2.26
SREBF1-210ENST00000471445 LRP5O75197 1615 aa29.19■■■□□ 2.26
SREBF1-210ENST00000471445 MARCH10Q8NA82 808 aaPredicted RBP29.18■■■□□ 2.26
SREBF1-210ENST00000471445 NLRP2Q9NX02 1062 aa29.18■■■□□ 2.26
SREBF1-210ENST00000471445 NSD3Q9BZ95 1437 aa29.18■■■□□ 2.26
SREBF1-210ENST00000471445 GGNBP2Q9H3C7 697 aa29.17■■■□□ 2.26
SREBF1-210ENST00000471445 NHSQ6T4R5 1651 aa29.15■■■□□ 2.26
SREBF1-210ENST00000471445 FBLN1P23142 703 aa29.14■■■□□ 2.26
SREBF1-210ENST00000471445 HOXC9P31274 260 aa29.14■■■□□ 2.26
SREBF1-210ENST00000471445 EIF4G2P78344 907 aaKnown RBP eCLIP29.14■■■□□ 2.26
SREBF1-210ENST00000471445 CARD14Q9BXL6 1004 aa29.14■■■□□ 2.26
SREBF1-210ENST00000471445 ANKRD26Q9UPS8 1709 aa29.13■■■□□ 2.25
SREBF1-210ENST00000471445 EXOC5O00471 708 aa29.12■■■□□ 2.25
SREBF1-210ENST00000471445 IL2RBP14784 551 aa29.12■■■□□ 2.25
SREBF1-210ENST00000471445 HSPA5P11021 654 aaKnown RBP29.11■■■□□ 2.25
SREBF1-210ENST00000471445 PSDA5PKW4 1024 aaPredicted RBP29.1■■■□□ 2.25
SREBF1-210ENST00000471445 AMPHP49418 695 aa29.1■■■□□ 2.25
SREBF1-210ENST00000471445 SHANK3Q9BYB0 1731 aa29.09■■■□□ 2.25
SREBF1-210ENST00000471445 RRS1Q15050 365 aaKnown RBP29.09■■■□□ 2.25
SREBF1-210ENST00000471445 LTV1Q96GA3 475 aaPredicted RBP29.08■■■□□ 2.25
SREBF1-210ENST00000471445 BCL11BQ9C0K0 894 aaPredicted RBP29.08■■■□□ 2.25
SREBF1-210ENST00000471445 KIF24Q5T7B8 1368 aa29.06■■■□□ 2.24
SREBF1-210ENST00000471445 PTF1AQ7RTS3 328 aa29.05■■■□□ 2.24
SREBF1-210ENST00000471445 PLSCR1O15162 318 aa29.04■■■□□ 2.24
SREBF1-210ENST00000471445 R3HDM1Q15032 1099 aaKnown RBP29.04■■■□□ 2.24
SREBF1-210ENST00000471445 FLT4P35916 1363 aa29.03■■■□□ 2.24
SREBF1-210ENST00000471445 MAP2P11137 1827 aaKnown RBP29.03■■■□□ 2.24
SREBF1-210ENST00000471445 SMG6Q86US8 1419 aaKnown RBP29.03■■■□□ 2.24
SREBF1-210ENST00000471445 INSRP06213 1382 aa29.02■■■□□ 2.24
SREBF1-210ENST00000471445 BTAF1O14981 1849 aa29.02■■■□□ 2.24
SREBF1-210ENST00000471445 POLR3GLQ9BT43 218 aa29.02■■■□□ 2.24
SREBF1-210ENST00000471445 MEGF6O75095 1541 aa29.02■■■□□ 2.24
SREBF1-210ENST00000471445 CGNL1Q0VF96 1302 aa29.01■■■□□ 2.23
SREBF1-210ENST00000471445 DOT1LQ8TEK3 1739 aa28.98■■■□□ 2.23
SREBF1-210ENST00000471445 KAT6BQ8WYB5 2073 aa28.96■■■□□ 2.23
SREBF1-210ENST00000471445 HSP90AB2PQ58FF8 381 aa28.95■■■□□ 2.22
SREBF1-210ENST00000471445 NBPF14Q5TI25 921 aa28.95■■■□□ 2.22
SREBF1-210ENST00000471445 EMILIN1Q9Y6C2 1016 aa28.95■■■□□ 2.22
SREBF1-210ENST00000471445 KCNQ2O43526 872 aa28.94■■■□□ 2.22
SREBF1-210ENST00000471445 NBPF6Q5VWK0 638 aa28.94■■■□□ 2.22
SREBF1-210ENST00000471445 NBPF4Q96M43 638 aa28.94■■■□□ 2.22
SREBF1-210ENST00000471445 ACSBG1Q96GR2 724 aa28.92■■■□□ 2.22
SREBF1-210ENST00000471445 CASZ1Q86V15 1759 aa28.92■■■□□ 2.22
SREBF1-210ENST00000471445 NCAPD2Q15021 1401 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms