RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-207ENST00000470763 TRPM2O94759 1503 aa17.01■□□□□ 0.31
NPHP4-207ENST00000470763 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
NPHP4-207ENST00000470763 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
NPHP4-207ENST00000470763 ZHX1Q9UKY1 873 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-207ENST00000470763 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
NPHP4-207ENST00000470763 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 PDLIM2Q96JY6 352 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 PTPRTO14522 1441 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
NPHP4-207ENST00000470763 HS1BP3Q53T59 392 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 CAMSAP1Q5T5Y3 1602 aa17■□□□□ 0.31
NPHP4-207ENST00000470763 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
NPHP4-207ENST00000470763 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
NPHP4-207ENST00000470763 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-207ENST00000470763 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
NPHP4-207ENST00000470763 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
NPHP4-207ENST00000470763 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
NPHP4-207ENST00000470763 RNF214Q8ND24 703 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 TNRQ92752 1358 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 DYNC1I1O14576 645 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
NPHP4-207ENST00000470763 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-207ENST00000470763 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
NPHP4-207ENST00000470763 SYCE3A1L190 88 aa16.96■□□□□ 0.31
NPHP4-207ENST00000470763 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.31
NPHP4-207ENST00000470763 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
NPHP4-207ENST00000470763 NOS1P29475 1434 aa16.96■□□□□ 0.3
NPHP4-207ENST00000470763 DEPDC5O75140 1603 aa16.95■□□□□ 0.3
NPHP4-207ENST00000470763 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
NPHP4-207ENST00000470763 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-207ENST00000470763 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-207ENST00000470763 UGGT1Q9NYU2 1555 aa16.95■□□□□ 0.3
NPHP4-207ENST00000470763 NUCB2P80303 420 aa16.95■□□□□ 0.3
NPHP4-207ENST00000470763 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 CSPP1Q1MSJ5 1256 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
NPHP4-207ENST00000470763 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 TMEM63CQ9P1W3 806 aa16.94■□□□□ 0.3
NPHP4-207ENST00000470763 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
NPHP4-207ENST00000470763 MPNDQ8N594 471 aa16.93■□□□□ 0.3
NPHP4-207ENST00000470763 CDC45O75419 566 aa16.93■□□□□ 0.3
NPHP4-207ENST00000470763 TSC1Q92574 1164 aa16.93■□□□□ 0.3
NPHP4-207ENST00000470763 ADGRB2O60241 1585 aa16.93■□□□□ 0.3
NPHP4-207ENST00000470763 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-207ENST00000470763 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
NPHP4-207ENST00000470763 SPATA31D1Q6ZQQ2 1576 aa16.92■□□□□ 0.3
NPHP4-207ENST00000470763 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
NPHP4-207ENST00000470763 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
NPHP4-207ENST00000470763 CCDC39Q9UFE4 941 aa16.91■□□□□ 0.3
NPHP4-207ENST00000470763 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
NPHP4-207ENST00000470763 RABEP1Q15276 862 aa16.91■□□□□ 0.3
NPHP4-207ENST00000470763 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
NPHP4-207ENST00000470763 LRSAM1Q6UWE0 723 aa16.91■□□□□ 0.3
NPHP4-207ENST00000470763 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
NPHP4-207ENST00000470763 CFAP65Q6ZU64 1925 aaKnown RBP16.91■□□□□ 0.3
NPHP4-207ENST00000470763 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
NPHP4-207ENST00000470763 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
NPHP4-207ENST00000470763 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
NPHP4-207ENST00000470763 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.3
NPHP4-207ENST00000470763 ZDHHC9Q9Y397 364 aa16.89■□□□□ 0.3
NPHP4-207ENST00000470763 MCM5P33992 734 aa16.88■□□□□ 0.29
NPHP4-207ENST00000470763 CCDC94Q9BW85 323 aaPredicted RBP16.88■□□□□ 0.29
NPHP4-207ENST00000470763 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
NPHP4-207ENST00000470763 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
NPHP4-207ENST00000470763 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
NPHP4-207ENST00000470763 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
NPHP4-207ENST00000470763 ELL2O00472 640 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-207ENST00000470763 LMTK2Q8IWU2 1503 aa16.86■□□□□ 0.29
NPHP4-207ENST00000470763 LTBP4Q8N2S1 1624 aa16.86■□□□□ 0.29
NPHP4-207ENST00000470763 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-207ENST00000470763 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
NPHP4-207ENST00000470763 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
NPHP4-207ENST00000470763 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
NPHP4-207ENST00000470763 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-207ENST00000470763 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
NPHP4-207ENST00000470763 CBX1P83916 185 aa16.85■□□□□ 0.29
NPHP4-207ENST00000470763 MYOM2P54296 1465 aa16.85■□□□□ 0.29
NPHP4-207ENST00000470763 ZSCAN20P17040 1043 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-207ENST00000470763 DMTNQ08495 405 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 QRICH2Q9H0J4 1663 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 MED14O60244 1454 aa16.84■□□□□ 0.29
NPHP4-207ENST00000470763 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.29
NPHP4-207ENST00000470763 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.29
NPHP4-207ENST00000470763 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.29
NPHP4-207ENST00000470763 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
NPHP4-207ENST00000470763 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms