RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 INSM1Q01101 510 aaPredicted RBP7.72□□□□□ -1.17
SRRM1-208ENST00000470243 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
SRRM1-208ENST00000470243 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
SRRM1-208ENST00000470243 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
SRRM1-208ENST00000470243 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
SRRM1-208ENST00000470243 RFX1P22670 979 aa7.71□□□□□ -1.18
SRRM1-208ENST00000470243 ARMC2Q8NEN0 867 aa7.71□□□□□ -1.18
SRRM1-208ENST00000470243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.7□□□□□ -1.18
SRRM1-208ENST00000470243 J3QL48 77 aa7.7□□□□□ -1.18
SRRM1-208ENST00000470243 PIK3CDO00329 1044 aa7.7□□□□□ -1.18
SRRM1-208ENST00000470243 TERTO14746 1132 aaKnown RBP7.7□□□□□ -1.18
SRRM1-208ENST00000470243 PTK2Q05397 1052 aa7.7□□□□□ -1.18
SRRM1-208ENST00000470243 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
SRRM1-208ENST00000470243 PDXDC2PQ6P474 469 aa7.7□□□□□ -1.18
SRRM1-208ENST00000470243 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
SRRM1-208ENST00000470243 TBC1D9Q6ZT07 1266 aa7.69□□□□□ -1.18
SRRM1-208ENST00000470243 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
SRRM1-208ENST00000470243 SNIP1Q8TAD8 396 aaKnown RBP7.69□□□□□ -1.18
SRRM1-208ENST00000470243 ARHGAP9Q9BRR9 750 aa7.69□□□□□ -1.18
SRRM1-208ENST00000470243 CARD14Q9BXL6 1004 aa7.69□□□□□ -1.18
SRRM1-208ENST00000470243 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
SRRM1-208ENST00000470243 WNT7AO00755 349 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
SRRM1-208ENST00000470243 SH3BP5LQ7L8J4 393 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 ADAM32Q8TC27 787 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
SRRM1-208ENST00000470243 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
SRRM1-208ENST00000470243 MAGEB6P1A0A0J9YX57 407 aa7.67□□□□□ -1.18
SRRM1-208ENST00000470243 TRIM32Q13049 653 aa7.67□□□□□ -1.18
SRRM1-208ENST00000470243 BAP1Q92560 729 aa7.67□□□□□ -1.18
SRRM1-208ENST00000470243 HPS1Q92902 700 aa7.67□□□□□ -1.18
SRRM1-208ENST00000470243 PBXIP1Q96AQ6 731 aa7.67□□□□□ -1.18
SRRM1-208ENST00000470243 FAM174AQ8TBP5 190 aa7.66□□□□□ -1.18
SRRM1-208ENST00000470243 FOXJ1Q92949 421 aa7.66□□□□□ -1.18
SRRM1-208ENST00000470243 TRIM47Q96LD4 638 aa7.66□□□□□ -1.18
SRRM1-208ENST00000470243 ATP9BO43861 1147 aa7.65□□□□□ -1.18
SRRM1-208ENST00000470243 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
SRRM1-208ENST00000470243 PDIA4P13667 645 aaKnown RBP7.65□□□□□ -1.18
SRRM1-208ENST00000470243 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
SRRM1-208ENST00000470243 ZBTB33Q86T24 672 aa7.65□□□□□ -1.18
SRRM1-208ENST00000470243 ZNF511Q8NB15 262 aa7.65□□□□□ -1.18
SRRM1-208ENST00000470243 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
SRRM1-208ENST00000470243 SRPK2P78362 688 aaKnown RBP7.64□□□□□ -1.19
SRRM1-208ENST00000470243 CDCA8Q53HL2 280 aa7.64□□□□□ -1.19
SRRM1-208ENST00000470243 SH3RF1Q7Z6J0 888 aa7.64□□□□□ -1.19
SRRM1-208ENST00000470243 SKIP12755 728 aa7.63□□□□□ -1.19
SRRM1-208ENST00000470243 AGERQ15109 404 aa7.63□□□□□ -1.19
SRRM1-208ENST00000470243 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
SRRM1-208ENST00000470243 CEP126Q9P2H0 1117 aa7.63□□□□□ -1.19
SRRM1-208ENST00000470243 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 USP17L2Q6R6M4 530 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
SRRM1-208ENST00000470243 DEPDC4Q8N2C3 294 aa7.62□□□□□ -1.19
SRRM1-208ENST00000470243 SH3BP2P78314 561 aa7.61□□□□□ -1.19
SRRM1-208ENST00000470243 TRIM26Q12899 539 aaPredicted RBP7.61□□□□□ -1.19
SRRM1-208ENST00000470243 SLFNL1Q499Z3 407 aa7.61□□□□□ -1.19
SRRM1-208ENST00000470243 BPHLQ86WA6 291 aaPredicted RBP7.61□□□□□ -1.19
SRRM1-208ENST00000470243 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
SRRM1-208ENST00000470243 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
SRRM1-208ENST00000470243 RC3H1Q5TC82 1133 aaKnown RBP7.6□□□□□ -1.19
SRRM1-208ENST00000470243 ZNF592Q92610 1267 aa7.6□□□□□ -1.19
SRRM1-208ENST00000470243 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
SRRM1-208ENST00000470243 ACIN1Q9UKV3 1341 aaKnown RBP7.59□□□□□ -1.19
SRRM1-208ENST00000470243 MCCD1P59942 119 aaPredicted RBP7.59□□□□□ -1.19
SRRM1-208ENST00000470243 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.19
SRRM1-208ENST00000470243 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
SRRM1-208ENST00000470243 KIFC2Q96AC6 838 aa7.59□□□□□ -1.19
SRRM1-208ENST00000470243 SLC10A4Q96EP9 437 aa7.59□□□□□ -1.19
SRRM1-208ENST00000470243 TRAIPQ9BWF2 469 aa7.59□□□□□ -1.19
SRRM1-208ENST00000470243 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 VEGFBP49765 207 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 SKOR1P84550 965 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 NCOA4Q13772 614 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 KANK4Q5T7N3 995 aaPredicted RBP7.58□□□□□ -1.2
SRRM1-208ENST00000470243 PLEKHM2Q8IWE5 1019 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 SLC16A10Q8TF71 515 aa7.58□□□□□ -1.2
SRRM1-208ENST00000470243 GIGYF1O75420 1035 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-208ENST00000470243 ATG7O95352 703 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 ALDH1A1P00352 501 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 BMP1P13497 986 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 GMPRP36959 345 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 TSGA10IPQ3SY00 556 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-208ENST00000470243 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
SRRM1-208ENST00000470243 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
SRRM1-208ENST00000470243 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
SRRM1-208ENST00000470243 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
SRRM1-208ENST00000470243 CHIC2Q9UKJ5 165 aa7.56□□□□□ -1.2
SRRM1-208ENST00000470243 FAM181BA6NEQ2 426 aa7.55□□□□□ -1.2
SRRM1-208ENST00000470243 WNT7BP56706 349 aa7.55□□□□□ -1.2
SRRM1-208ENST00000470243 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
SRRM1-208ENST00000470243 ZMIZ1Q9ULJ6 1067 aa7.55□□□□□ -1.2
SRRM1-208ENST00000470243 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
SRRM1-208ENST00000470243 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-208ENST00000470243 RAB15P59190 212 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms