RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 ZRANB1Q9UGI0 708 aa29.73■■■□□ 2.35
RTN4R-205ENST00000469601 WDR17Q8IZU2 1322 aa29.72■■■□□ 2.35
RTN4R-205ENST00000469601 NFAT5O94916 1531 aa29.72■■■□□ 2.35
RTN4R-205ENST00000469601 PDE3BQ13370 1112 aa29.72■■■□□ 2.35
RTN4R-205ENST00000469601 AXIN2Q9Y2T1 843 aa29.72■■■□□ 2.35
RTN4R-205ENST00000469601 ANKRD36BQ8N2N9 1353 aa29.72■■■□□ 2.35
RTN4R-205ENST00000469601 EP400Q96L91 3159 aa29.7■■■□□ 2.35
RTN4R-205ENST00000469601 FAM196AQ6ZSG2 479 aa29.7■■■□□ 2.35
RTN4R-205ENST00000469601 ABCC6O95255 1503 aa29.7■■■□□ 2.34
RTN4R-205ENST00000469601 CSB-PGBD3P0DP91 1061 aa29.69■■■□□ 2.34
RTN4R-205ENST00000469601 USP54Q70EL1 1684 aa29.69■■■□□ 2.34
RTN4R-205ENST00000469601 BAG6P46379 1132 aa29.67■■■□□ 2.34
RTN4R-205ENST00000469601 FAM182BQ5T319 152 aa29.67■■■□□ 2.34
RTN4R-205ENST00000469601 COL18A1P39060 1754 aa29.67■■■□□ 2.34
RTN4R-205ENST00000469601 COG3Q96JB2 828 aa29.66■■■□□ 2.34
RTN4R-205ENST00000469601 OVOS2A0A0J9YW53 1432 aa29.65■■■□□ 2.34
RTN4R-205ENST00000469601 OVOS2Q6IE36 1432 aa29.65■■■□□ 2.34
RTN4R-205ENST00000469601 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
RTN4R-205ENST00000469601 CDCA7Q9BWT1 371 aaPredicted RBP29.65■■■□□ 2.34
RTN4R-205ENST00000469601 C11orf95C9JLR9 678 aaPredicted RBP29.64■■■□□ 2.34
RTN4R-205ENST00000469601 CARD10Q9BWT7 1032 aa29.64■■■□□ 2.34
RTN4R-205ENST00000469601 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
RTN4R-205ENST00000469601 DDB1Q16531 1140 aa29.59■■■□□ 2.33
RTN4R-205ENST00000469601 CCDC7Q96M83 1385 aa29.59■■■□□ 2.33
RTN4R-205ENST00000469601 ERBB3P21860 1342 aa29.57■■■□□ 2.32
RTN4R-205ENST00000469601 TRIM37O94972 964 aa29.56■■■□□ 2.32
RTN4R-205ENST00000469601 PARP4Q9UKK3 1724 aaKnown RBP29.56■■■□□ 2.32
RTN4R-205ENST00000469601 RGPD1P0DJD0 1748 aa29.55■■■□□ 2.32
RTN4R-205ENST00000469601 DISP2A7MBM2 1401 aa29.54■■■□□ 2.32
RTN4R-205ENST00000469601 FYB1O15117 783 aa29.54■■■□□ 2.32
RTN4R-205ENST00000469601 IP6K1Q92551 441 aa29.54■■■□□ 2.32
RTN4R-205ENST00000469601 ANKRD24Q8TF21 1146 aa29.53■■■□□ 2.32
RTN4R-205ENST00000469601 NLRP2Q9NX02 1062 aa29.53■■■□□ 2.32
RTN4R-205ENST00000469601 OVOS2A0A0G2JMS6 1433 aa29.52■■■□□ 2.32
RTN4R-205ENST00000469601 EN1Q05925 392 aaPredicted RBP29.51■■■□□ 2.31
RTN4R-205ENST00000469601 HSPA5P11021 654 aaKnown RBP29.5■■■□□ 2.31
RTN4R-205ENST00000469601 GGNBP2Q9H3C7 697 aa29.5■■■□□ 2.31
RTN4R-205ENST00000469601 EXOC5O00471 708 aa29.49■■■□□ 2.31
RTN4R-205ENST00000469601 APBA3O96018 575 aa29.49■■■□□ 2.31
RTN4R-205ENST00000469601 AMPHP49418 695 aa29.49■■■□□ 2.31
RTN4R-205ENST00000469601 MAP3K19Q56UN5 1328 aa29.48■■■□□ 2.31
RTN4R-205ENST00000469601 LTN1O94822 1766 aa29.48■■■□□ 2.31
RTN4R-205ENST00000469601 RGPD5Q99666 1765 aa29.48■■■□□ 2.31
RTN4R-205ENST00000469601 PARD3Q8TEW0 1356 aa29.47■■■□□ 2.31
RTN4R-205ENST00000469601 LRRC37A3O60309 1634 aa29.46■■■□□ 2.31
RTN4R-205ENST00000469601 CARD14Q9BXL6 1004 aa29.46■■■□□ 2.31
RTN4R-205ENST00000469601 HOXC9P31274 260 aa29.45■■■□□ 2.31
RTN4R-205ENST00000469601 POLR3GLQ9BT43 218 aa29.45■■■□□ 2.31
RTN4R-205ENST00000469601 NSD3Q9BZ95 1437 aa29.45■■■□□ 2.3
RTN4R-205ENST00000469601 RTL1A6NKG5 1358 aa29.44■■■□□ 2.3
RTN4R-205ENST00000469601 IL2RBP14784 551 aa29.44■■■□□ 2.3
RTN4R-205ENST00000469601 TNS1Q9HBL0 1735 aaKnown RBP29.43■■■□□ 2.3
RTN4R-205ENST00000469601 MARCH10Q8NA82 808 aaPredicted RBP29.43■■■□□ 2.3
RTN4R-205ENST00000469601 CAMKK2Q96RR4 588 aa29.43■■■□□ 2.3
RTN4R-205ENST00000469601 MYOM1P52179 1685 aa29.42■■■□□ 2.3
RTN4R-205ENST00000469601 BCL9O00512 1426 aa29.42■■■□□ 2.3
RTN4R-205ENST00000469601 CGNL1Q0VF96 1302 aa29.42■■■□□ 2.3
RTN4R-205ENST00000469601 EZH2Q15910 746 aaKnown RBP29.41■■■□□ 2.3
RTN4R-205ENST00000469601 LTV1Q96GA3 475 aaPredicted RBP29.41■■■□□ 2.3
RTN4R-205ENST00000469601 WNK3Q9BYP7 1800 aa29.41■■■□□ 2.3
RTN4R-205ENST00000469601 TNS2Q63HR2 1409 aa29.4■■■□□ 2.3
RTN4R-205ENST00000469601 FBLN1P23142 703 aa29.39■■■□□ 2.3
RTN4R-205ENST00000469601 RRS1Q15050 365 aaKnown RBP29.39■■■□□ 2.3
RTN4R-205ENST00000469601 BCL11BQ9C0K0 894 aaPredicted RBP29.38■■■□□ 2.29
RTN4R-205ENST00000469601 KIF24Q5T7B8 1368 aa29.38■■■□□ 2.29
RTN4R-205ENST00000469601 PEAK1Q9H792 1746 aa29.37■■■□□ 2.29
RTN4R-205ENST00000469601 SMG6Q86US8 1419 aaKnown RBP29.35■■■□□ 2.29
RTN4R-205ENST00000469601 FAM208AQ9UK61 1670 aaKnown RBP29.34■■■□□ 2.29
RTN4R-205ENST00000469601 KIF20BQ96Q89 1820 aa29.34■■■□□ 2.29
RTN4R-205ENST00000469601 FLT4P35916 1363 aa29.33■■■□□ 2.29
RTN4R-205ENST00000469601 PLSCR1O15162 318 aa29.32■■■□□ 2.28
RTN4R-205ENST00000469601 INSRP06213 1382 aa29.31■■■□□ 2.28
RTN4R-205ENST00000469601 NBPF14Q5TI25 921 aa29.3■■■□□ 2.28
RTN4R-205ENST00000469601 PSDA5PKW4 1024 aaPredicted RBP29.29■■■□□ 2.28
RTN4R-205ENST00000469601 PANK3Q9H999 370 aa29.29■■■□□ 2.28
RTN4R-205ENST00000469601 R3HDM1Q15032 1099 aaKnown RBP29.27■■■□□ 2.28
RTN4R-205ENST00000469601 HSP90AB2PQ58FF8 381 aa29.27■■■□□ 2.28
RTN4R-205ENST00000469601 NBPF6Q5VWK0 638 aa29.25■■■□□ 2.27
RTN4R-205ENST00000469601 NBPF4Q96M43 638 aa29.25■■■□□ 2.27
RTN4R-205ENST00000469601 EMILIN1Q9Y6C2 1016 aa29.24■■■□□ 2.27
RTN4R-205ENST00000469601 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
RTN4R-205ENST00000469601 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
RTN4R-205ENST00000469601 PTF1AQ7RTS3 328 aa29.22■■■□□ 2.27
RTN4R-205ENST00000469601 RAPGEF4Q8WZA2 1011 aa29.22■■■□□ 2.27
RTN4R-205ENST00000469601 NSD2O96028 1365 aa29.22■■■□□ 2.27
RTN4R-205ENST00000469601 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
RTN4R-205ENST00000469601 SBF2Q86WG5 1849 aa29.21■■■□□ 2.27
RTN4R-205ENST00000469601 RREB1Q92766 1687 aa29.21■■■□□ 2.27
RTN4R-205ENST00000469601 WASHC2AQ641Q2 1341 aa29.2■■■□□ 2.26
RTN4R-205ENST00000469601 RGPD3A6NKT7 1758 aaPredicted RBP29.19■■■□□ 2.26
RTN4R-205ENST00000469601 RGPD4Q7Z3J3 1758 aa29.19■■■□□ 2.26
RTN4R-205ENST00000469601 KCNQ2O43526 872 aa29.19■■■□□ 2.26
RTN4R-205ENST00000469601 ACSBG1Q96GR2 724 aa29.19■■■□□ 2.26
RTN4R-205ENST00000469601 KNSTRNQ9Y448 316 aa29.19■■■□□ 2.26
RTN4R-205ENST00000469601 POLKQ9UBT6 870 aa29.18■■■□□ 2.26
RTN4R-205ENST00000469601 TATP17735 454 aaPredicted RBP29.17■■■□□ 2.26
RTN4R-205ENST00000469601 USHBP1Q8N6Y0 703 aa29.17■■■□□ 2.26
RTN4R-205ENST00000469601 KIF7Q2M1P5 1343 aa29.16■■■□□ 2.26
RTN4R-205ENST00000469601 MEGF6O75095 1541 aa29.15■■■□□ 2.26
RTN4R-205ENST00000469601 TNNT2P45379 298 aaPredicted RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms