RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ARHGEF25Q86VW2 580 aa17.64■□□□□ 0.41
ABCF1-204ENST00000468958 USP35Q9P2H5 1018 aa17.64■□□□□ 0.41
ABCF1-204ENST00000468958 A0A0G2JS52 829 aa17.63■□□□□ 0.41
ABCF1-204ENST00000468958 MYT1Q01538 1121 aa17.63■□□□□ 0.41
ABCF1-204ENST00000468958 EVA1CP58658 441 aa17.62■□□□□ 0.41
ABCF1-204ENST00000468958 HDGFL2Q7Z4V5 671 aaPredicted RBP17.62■□□□□ 0.41
ABCF1-204ENST00000468958 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
ABCF1-204ENST00000468958 CRB1P82279 1406 aa17.62■□□□□ 0.41
ABCF1-204ENST00000468958 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
ABCF1-204ENST00000468958 ABCC6O95255 1503 aa17.61■□□□□ 0.41
ABCF1-204ENST00000468958 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
ABCF1-204ENST00000468958 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
ABCF1-204ENST00000468958 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
ABCF1-204ENST00000468958 TERF2IPQ9NYB0 399 aa17.6■□□□□ 0.41
ABCF1-204ENST00000468958 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
ABCF1-204ENST00000468958 TMF1P82094 1093 aa17.59■□□□□ 0.41
ABCF1-204ENST00000468958 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
ABCF1-204ENST00000468958 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
ABCF1-204ENST00000468958 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
ABCF1-204ENST00000468958 DEFB132Q7Z7B7 95 aa17.58■□□□□ 0.4
ABCF1-204ENST00000468958 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
ABCF1-204ENST00000468958 WDR17Q8IZU2 1322 aa17.56■□□□□ 0.4
ABCF1-204ENST00000468958 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
ABCF1-204ENST00000468958 FBLN1P23142 703 aa17.55■□□□□ 0.4
ABCF1-204ENST00000468958 THRAP3Q9Y2W1 955 aaKnown RBP17.54■□□□□ 0.4
ABCF1-204ENST00000468958 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
ABCF1-204ENST00000468958 FAM208AQ9UK61 1670 aaKnown RBP17.53■□□□□ 0.4
ABCF1-204ENST00000468958 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
ABCF1-204ENST00000468958 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
ABCF1-204ENST00000468958 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
ABCF1-204ENST00000468958 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.39
ABCF1-204ENST00000468958 RREB1Q92766 1687 aa17.52■□□□□ 0.39
ABCF1-204ENST00000468958 FYB1O15117 783 aa17.51■□□□□ 0.39
ABCF1-204ENST00000468958 ERBB3P21860 1342 aa17.5■□□□□ 0.39
ABCF1-204ENST00000468958 GGNBP2Q9H3C7 697 aa17.5■□□□□ 0.39
ABCF1-204ENST00000468958 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
ABCF1-204ENST00000468958 NSD3Q9BZ95 1437 aa17.49■□□□□ 0.39
ABCF1-204ENST00000468958 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
ABCF1-204ENST00000468958 NUP188Q5SRE5 1749 aa17.49■□□□□ 0.39
ABCF1-204ENST00000468958 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
ABCF1-204ENST00000468958 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
ABCF1-204ENST00000468958 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
ABCF1-204ENST00000468958 TRIM37O94972 964 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 EIF4G2P78344 907 aaKnown RBP eCLIP17.47■□□□□ 0.39
ABCF1-204ENST00000468958 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
ABCF1-204ENST00000468958 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 COG3Q96JB2 828 aa17.47■□□□□ 0.39
ABCF1-204ENST00000468958 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
ABCF1-204ENST00000468958 FAM196AQ6ZSG2 479 aa17.46■□□□□ 0.39
ABCF1-204ENST00000468958 ANKRD24Q8TF21 1146 aa17.46■□□□□ 0.39
ABCF1-204ENST00000468958 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
ABCF1-204ENST00000468958 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
ABCF1-204ENST00000468958 IP6K1Q92551 441 aa17.45■□□□□ 0.38
ABCF1-204ENST00000468958 RGPD3A6NKT7 1758 aaPredicted RBP17.44■□□□□ 0.38
ABCF1-204ENST00000468958 RGPD4Q7Z3J3 1758 aa17.44■□□□□ 0.38
ABCF1-204ENST00000468958 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
ABCF1-204ENST00000468958 DDB1Q16531 1140 aa17.44■□□□□ 0.38
ABCF1-204ENST00000468958 MARCH10Q8NA82 808 aaPredicted RBP17.44■□□□□ 0.38
ABCF1-204ENST00000468958 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
ABCF1-204ENST00000468958 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
ABCF1-204ENST00000468958 HOXC9P31274 260 aa17.43■□□□□ 0.38
ABCF1-204ENST00000468958 BAG6P46379 1132 aa17.43■□□□□ 0.38
ABCF1-204ENST00000468958 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
ABCF1-204ENST00000468958 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
ABCF1-204ENST00000468958 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
ABCF1-204ENST00000468958 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
ABCF1-204ENST00000468958 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
ABCF1-204ENST00000468958 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
ABCF1-204ENST00000468958 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
ABCF1-204ENST00000468958 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
ABCF1-204ENST00000468958 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
ABCF1-204ENST00000468958 BCL9O00512 1426 aa17.38■□□□□ 0.37
ABCF1-204ENST00000468958 BTAF1O14981 1849 aa17.38■□□□□ 0.37
ABCF1-204ENST00000468958 APBA3O96018 575 aa17.38■□□□□ 0.37
ABCF1-204ENST00000468958 AMPHP49418 695 aa17.38■□□□□ 0.37
ABCF1-204ENST00000468958 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
ABCF1-204ENST00000468958 MEGF6O75095 1541 aa17.37■□□□□ 0.37
ABCF1-204ENST00000468958 EXOC5O00471 708 aa17.36■□□□□ 0.37
ABCF1-204ENST00000468958 IL2RBP14784 551 aa17.36■□□□□ 0.37
ABCF1-204ENST00000468958 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
ABCF1-204ENST00000468958 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
ABCF1-204ENST00000468958 PSDA5PKW4 1024 aaPredicted RBP17.35■□□□□ 0.37
ABCF1-204ENST00000468958 PANK3Q9H999 370 aa17.35■□□□□ 0.37
ABCF1-204ENST00000468958 INSRP06213 1382 aa17.34■□□□□ 0.37
ABCF1-204ENST00000468958 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
ABCF1-204ENST00000468958 NBPF6Q5VWK0 638 aa17.34■□□□□ 0.37
ABCF1-204ENST00000468958 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
ABCF1-204ENST00000468958 NBPF4Q96M43 638 aa17.34■□□□□ 0.37
ABCF1-204ENST00000468958 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.37
ABCF1-204ENST00000468958 LRP5O75197 1615 aa17.33■□□□□ 0.37
ABCF1-204ENST00000468958 FLT4P35916 1363 aa17.33■□□□□ 0.36
ABCF1-204ENST00000468958 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
ABCF1-204ENST00000468958 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
ABCF1-204ENST00000468958 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
ABCF1-204ENST00000468958 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
ABCF1-204ENST00000468958 KCNQ2O43526 872 aa17.32■□□□□ 0.36
ABCF1-204ENST00000468958 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms