RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	CDV3	Q9UKY7	258 aa	Known RBP	12	□□□□□ -0.49
CCNL1-209	ENST00000467081	CTC1	Q2NKJ3	1217 aa		11.99	□□□□□ -0.49
CCNL1-209	ENST00000467081	CRIPAK	Q8N1N5	446 aa		11.98	□□□□□ -0.49
CCNL1-209	ENST00000467081	RAD21	O60216	631 aa		11.97	□□□□□ -0.49
CCNL1-209	ENST00000467081	NBPF20	Q3BBV1	942 aa		11.97	□□□□□ -0.49
CCNL1-209	ENST00000467081	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.97	□□□□□ -0.49
CCNL1-209	ENST00000467081	SMCP	P49901	116 aa	Predicted RBP	11.96	□□□□□ -0.49
CCNL1-209	ENST00000467081	WDR4	P57081	412 aa	Known RBP	11.96	□□□□□ -0.49
CCNL1-209	ENST00000467081	CAPN5	O15484	640 aa	Predicted RBP	11.95	□□□□□ -0.5
CCNL1-209	ENST00000467081	RAB15	P59190	212 aa		11.95	□□□□□ -0.5
CCNL1-209	ENST00000467081	VAC14	Q08AM6	782 aa		11.95	□□□□□ -0.5
CCNL1-209	ENST00000467081	CCDC116	Q8IYX3	515 aa		11.95	□□□□□ -0.5
CCNL1-209	ENST00000467081	DACH1	Q9UI36	760 aa		11.95	□□□□□ -0.5
CCNL1-209	ENST00000467081	ZIC2	O95409	532 aa	Predicted RBP	11.93	□□□□□ -0.5
CCNL1-209	ENST00000467081	TIMP2	P16035	220 aa		11.93	□□□□□ -0.5
CCNL1-209	ENST00000467081	INTS6L	Q5JSJ4	861 aa	Known RBP	11.93	□□□□□ -0.5
CCNL1-209	ENST00000467081	ITPKC	Q96DU7	683 aa		11.93	□□□□□ -0.5
CCNL1-209	ENST00000467081	KLF16	Q9BXK1	252 aa	Predicted RBP	11.93	□□□□□ -0.5
CCNL1-209	ENST00000467081	ZFAND3	Q9H8U3	227 aa		11.92	□□□□□ -0.5
CCNL1-209	ENST00000467081	GIGYF1	O75420	1035 aa	Predicted RBP	11.91	□□□□□ -0.5
CCNL1-209	ENST00000467081	WASHC4	Q2M389	1173 aa		11.91	□□□□□ -0.5
CCNL1-209	ENST00000467081	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.91	□□□□□ -0.5
CCNL1-209	ENST00000467081	MCCD1	P59942	119 aa	Predicted RBP	11.9	□□□□□ -0.5
CCNL1-209	ENST00000467081	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CCNL1-209	ENST00000467081	ZNF592	Q92610	1267 aa		11.9	□□□□□ -0.5
CCNL1-209	ENST00000467081	CLUAP1	Q96AJ1	413 aa		11.9	□□□□□ -0.5
CCNL1-209	ENST00000467081	EMILIN1	Q9Y6C2	1016 aa		11.9	□□□□□ -0.5
CCNL1-209	ENST00000467081	ESPN	B1AK53	854 aa		11.89	□□□□□ -0.51
CCNL1-209	ENST00000467081	DHX9	Q08211	1270 aa	Known RBP	11.89	□□□□□ -0.51
CCNL1-209	ENST00000467081	WWC1	Q8IX03	1113 aa		11.89	□□□□□ -0.51
CCNL1-209	ENST00000467081	BMP1	P13497	986 aa		11.88	□□□□□ -0.51
CCNL1-209	ENST00000467081	ATP13A2	Q9NQ11	1180 aa		11.88	□□□□□ -0.51
CCNL1-209	ENST00000467081	ERVH48-1	M5A8F1	160 aa		11.87	□□□□□ -0.51
CCNL1-209	ENST00000467081	TMPRSS4	Q9NRS4	437 aa		11.87	□□□□□ -0.51
CCNL1-209	ENST00000467081	PGPEP1	Q9NXJ5	209 aa		11.87	□□□□□ -0.51
CCNL1-209	ENST00000467081	GTF3C3	Q9Y5Q9	886 aa		11.86	□□□□□ -0.51
CCNL1-209	ENST00000467081	SEPT12	Q8IYM1	358 aa		11.85	□□□□□ -0.51
CCNL1-209	ENST00000467081	CEP126	Q9P2H0	1117 aa		11.85	□□□□□ -0.51
CCNL1-209	ENST00000467081	POTEC	B2RU33	542 aa		11.84	□□□□□ -0.51
CCNL1-209	ENST00000467081	GMPR2	Q9P2T1	348 aa	Known RBP	11.84	□□□□□ -0.51
CCNL1-209	ENST00000467081	CBLB	Q13191	982 aa		11.83	□□□□□ -0.52
CCNL1-209	ENST00000467081	SEMA3F	Q13275	785 aa		11.83	□□□□□ -0.52
CCNL1-209	ENST00000467081	RNF20	Q5VTR2	975 aa		11.83	□□□□□ -0.52
CCNL1-209	ENST00000467081	TRIM46	Q7Z4K8	759 aa		11.83	□□□□□ -0.52
CCNL1-209	ENST00000467081	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.83	□□□□□ -0.52
CCNL1-209	ENST00000467081	ZNF787	Q6DD87	383 aa		11.82	□□□□□ -0.52
CCNL1-209	ENST00000467081	MRPL14	Q6P1L8	145 aa	Known RBP	11.81	□□□□□ -0.52
CCNL1-209	ENST00000467081	PROSER2	Q86WR7	435 aa	Predicted RBP	11.81	□□□□□ -0.52
CCNL1-209	ENST00000467081	POM121C	A8CG34	1229 aa		11.8	□□□□□ -0.52
CCNL1-209	ENST00000467081	SOX11	P35716	441 aa		11.8	□□□□□ -0.52
CCNL1-209	ENST00000467081	MEIOB	Q8N635	442 aa		11.8	□□□□□ -0.52
CCNL1-209	ENST00000467081	CYLD	Q9NQC7	956 aa		11.8	□□□□□ -0.52
CCNL1-209	ENST00000467081	PURB	Q96QR8	312 aa	Known RBP	11.79	□□□□□ -0.52
CCNL1-209	ENST00000467081	PCDHB11	Q9Y5F2	797 aa		11.79	□□□□□ -0.52
CCNL1-209	ENST00000467081	SCARF1	Q14162	830 aa		11.78	□□□□□ -0.52
CCNL1-209	ENST00000467081	SLFNL1	Q499Z3	407 aa		11.78	□□□□□ -0.52
CCNL1-209	ENST00000467081	C6orf118	Q5T5N4	469 aa		11.78	□□□□□ -0.52
CCNL1-209	ENST00000467081		Q6ZVU0	165 aa		11.78	□□□□□ -0.52
CCNL1-209	ENST00000467081		A6NJR5	290 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	C11orf95	C9JLR9	678 aa	Predicted RBP	11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	LILRA1	O75019	489 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	UPP2	O95045	317 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	CCDC125	Q86Z20	511 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	LINC00528	Q8N1L1	170 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	ZFP42	Q96MM3	310 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	SENP2	Q9HC62	589 aa		11.77	□□□□□ -0.53
CCNL1-209	ENST00000467081	RNF135	Q8IUD6	432 aa		11.76	□□□□□ -0.53
CCNL1-209	ENST00000467081	AGBL1	Q96MI9	1066 aa		11.76	□□□□□ -0.53
CCNL1-209	ENST00000467081	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.76	□□□□□ -0.53
CCNL1-209	ENST00000467081	ALG2	Q9H553	416 aa		11.76	□□□□□ -0.53
CCNL1-209	ENST00000467081	BMP2	P12643	396 aa		11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	ADD1	P35611	737 aa	Known RBP	11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	PHTF2	Q8N3S3	785 aa		11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	TRIM52	Q96A61	297 aa		11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	TRIM47	Q96LD4	638 aa		11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	TSEN34	Q9BSV6	310 aa	Known RBP	11.75	□□□□□ -0.53
CCNL1-209	ENST00000467081	TSGA10IP	Q3SY00	556 aa		11.74	□□□□□ -0.53
CCNL1-209	ENST00000467081	SNRPB	P14678	240 aa	Known RBP	11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	SCTR	P47872	440 aa		11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	RELB	Q01201	579 aa		11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	CC2D2B	Q6DHV5	1058 aa		11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	ADAMTS19	Q8TE59	1207 aa		11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	KIFC2	Q96AC6	838 aa		11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.73	□□□□□ -0.53
CCNL1-209	ENST00000467081	ERVK-9	P63128	1117 aa		11.72	□□□□□ -0.53
CCNL1-209	ENST00000467081	HDGFL1	Q5TGJ6	251 aa		11.72	□□□□□ -0.53
CCNL1-209	ENST00000467081	ESF1	Q9H501	851 aa	Known RBP	11.72	□□□□□ -0.53
CCNL1-209	ENST00000467081	DOLK	Q9UPQ8	538 aa		11.72	□□□□□ -0.53
CCNL1-209	ENST00000467081	PIK3CD	O00329	1044 aa		11.71	□□□□□ -0.53
CCNL1-209	ENST00000467081	ADH1A	P07327	375 aa		11.71	□□□□□ -0.53
CCNL1-209	ENST00000467081	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.71	□□□□□ -0.53
CCNL1-209	ENST00000467081	MYC	P01106	439 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNL1-209	ENST00000467081	OXLD1	Q5BKU9	147 aa		11.68	□□□□□ -0.54
CCNL1-209	ENST00000467081	KDF1	Q8NAX2	398 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNL1-209	ENST00000467081	PLPP7	Q8NBV4	271 aa		11.68	□□□□□ -0.54
CCNL1-209	ENST00000467081	ATP5J2-PTCD1	G3V325	749 aa		11.67	□□□□□ -0.54
CCNL1-209	ENST00000467081	TRAK2	O60296	914 aa		11.67	□□□□□ -0.54
CCNL1-209	ENST00000467081	PTGIR	P43119	386 aa		11.67	□□□□□ -0.54
CCNL1-209	ENST00000467081	GLMN	Q92990	594 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms