RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SKOR2Q2VWA4 1001 aaPredicted RBP16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
PDZRN3-205ENST00000466780 FBLN1P23142 703 aa16.18■□□□□ 0.18
PDZRN3-205ENST00000466780 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
PDZRN3-205ENST00000466780 SSFA2P28290 1259 aa16.18■□□□□ 0.18
PDZRN3-205ENST00000466780 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
PDZRN3-205ENST00000466780 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
PDZRN3-205ENST00000466780 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
PDZRN3-205ENST00000466780 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
PDZRN3-205ENST00000466780 ABCC4O15439 1325 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 PTMSP20962 102 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 NFE2L2Q16236 605 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 HDGFL2Q7Z4V5 671 aaPredicted RBP16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
PDZRN3-205ENST00000466780 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 CLEC17AQ6ZS10 378 aa16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 HMOX1P09601 288 aa16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
PDZRN3-205ENST00000466780 CDC45O75419 566 aa16.14■□□□□ 0.17
PDZRN3-205ENST00000466780 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-205ENST00000466780 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.17
PDZRN3-205ENST00000466780 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
PDZRN3-205ENST00000466780 ARHGAP31Q2M1Z3 1444 aa16.14■□□□□ 0.17
PDZRN3-205ENST00000466780 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 REREQ9P2R6 1566 aa16.13■□□□□ 0.17
PDZRN3-205ENST00000466780 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
PDZRN3-205ENST00000466780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
PDZRN3-205ENST00000466780 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
PDZRN3-205ENST00000466780 KNDC1Q76NI1 1749 aa16.12■□□□□ 0.17
PDZRN3-205ENST00000466780 GNAI1P63096 354 aa16.11■□□□□ 0.17
PDZRN3-205ENST00000466780 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
PDZRN3-205ENST00000466780 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
PDZRN3-205ENST00000466780 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
PDZRN3-205ENST00000466780 TMEM131LA2VDJ0 1609 aa16.11■□□□□ 0.17
PDZRN3-205ENST00000466780 C8orf58Q8NAV2 365 aa16.1■□□□□ 0.17
PDZRN3-205ENST00000466780 PPP1R9BQ96SB3 815 aa16.1■□□□□ 0.17
PDZRN3-205ENST00000466780 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-205ENST00000466780 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
PDZRN3-205ENST00000466780 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
PDZRN3-205ENST00000466780 RICTORQ6R327 1708 aa16.08■□□□□ 0.17
PDZRN3-205ENST00000466780 IL13P35225 146 aa16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 RABEP1Q15276 862 aa16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
PDZRN3-205ENST00000466780 ALKQ9UM73 1620 aa16.07■□□□□ 0.16
PDZRN3-205ENST00000466780 CYP2E1P05181 493 aaPredicted RBP16.07■□□□□ 0.16
PDZRN3-205ENST00000466780 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
PDZRN3-205ENST00000466780 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
PDZRN3-205ENST00000466780 PKP1Q13835 747 aa16.06■□□□□ 0.16
PDZRN3-205ENST00000466780 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
PDZRN3-205ENST00000466780 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
PDZRN3-205ENST00000466780 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-205ENST00000466780 MCTP1Q6DN14 999 aa16.05■□□□□ 0.16
PDZRN3-205ENST00000466780 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
PDZRN3-205ENST00000466780 ATP7BP35670 1465 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 ZNF445P59923 1031 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 LMBRD1Q9NUN5 540 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 MLECQ14165 292 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 ATP10DQ9P241 1426 aa16.04■□□□□ 0.16
PDZRN3-205ENST00000466780 NUCB2P80303 420 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 ANKRD44Q8N8A2 993 aa16.03■□□□□ 0.16
PDZRN3-205ENST00000466780 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
PDZRN3-205ENST00000466780 CAVIN1Q6NZI2 390 aaKnown RBP16.02■□□□□ 0.16
PDZRN3-205ENST00000466780 NME9Q86XW9 330 aa16.02■□□□□ 0.16
PDZRN3-205ENST00000466780 RGS12O14924 1447 aa16.02■□□□□ 0.15
PDZRN3-205ENST00000466780 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.15
PDZRN3-205ENST00000466780 TPM2P07951 284 aa16.01■□□□□ 0.15
PDZRN3-205ENST00000466780 SDSP20132 328 aa16.01■□□□□ 0.15
PDZRN3-205ENST00000466780 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
PDZRN3-205ENST00000466780 ZGPATQ8N5A5 531 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-205ENST00000466780 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms