RNA–Protein interactions for RNA: ENST00000464273.1

PPP1CB-209, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-209ENST00000464273 U2AF1L5P0DN76 240 aaPredicted RBP18.93■□□□□ 0.62
PPP1CB-209ENST00000464273 IL13P35225 146 aa18.93■□□□□ 0.62
PPP1CB-209ENST00000464273 U2AF1Q01081 240 aaKnown RBP eCLIP18.93■□□□□ 0.62
PPP1CB-209ENST00000464273 FBXO41Q8TF61 875 aa18.93■□□□□ 0.62
PPP1CB-209ENST00000464273 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
PPP1CB-209ENST00000464273 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
PPP1CB-209ENST00000464273 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
PPP1CB-209ENST00000464273 CPDO75976 1380 aa18.92■□□□□ 0.62
PPP1CB-209ENST00000464273 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
PPP1CB-209ENST00000464273 EVA1CP58658 441 aa18.91■□□□□ 0.62
PPP1CB-209ENST00000464273 AXIN2Q9Y2T1 843 aa18.91■□□□□ 0.62
PPP1CB-209ENST00000464273 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
PPP1CB-209ENST00000464273 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
PPP1CB-209ENST00000464273 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
PPP1CB-209ENST00000464273 SPATA31A6Q5VVP1 1343 aa18.89■□□□□ 0.61
PPP1CB-209ENST00000464273 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
PPP1CB-209ENST00000464273 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
PPP1CB-209ENST00000464273 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
PPP1CB-209ENST00000464273 COL22A1Q8NFW1 1626 aaPredicted RBP18.86■□□□□ 0.61
PPP1CB-209ENST00000464273 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
PPP1CB-209ENST00000464273 LTN1O94822 1766 aa18.86■□□□□ 0.61
PPP1CB-209ENST00000464273 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
PPP1CB-209ENST00000464273 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 HMOX1P09601 288 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 NGLY1Q96IV0 654 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 EYA1Q99502 592 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 NLRP2Q9NX02 1062 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
PPP1CB-209ENST00000464273 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
PPP1CB-209ENST00000464273 NEFMP07197 916 aa18.84■□□□□ 0.61
PPP1CB-209ENST00000464273 C8orf37Q96NL8 207 aa18.84■□□□□ 0.61
PPP1CB-209ENST00000464273 CRYBG1Q9Y4K1 1723 aa18.83■□□□□ 0.61
PPP1CB-209ENST00000464273 FCHSD2O94868 740 aa18.83■□□□□ 0.6
PPP1CB-209ENST00000464273 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
PPP1CB-209ENST00000464273 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
PPP1CB-209ENST00000464273 NBPF6Q5VWK0 638 aa18.82■□□□□ 0.6
PPP1CB-209ENST00000464273 NBPF4Q96M43 638 aa18.82■□□□□ 0.6
PPP1CB-209ENST00000464273 ERBB3P21860 1342 aa18.81■□□□□ 0.6
PPP1CB-209ENST00000464273 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
PPP1CB-209ENST00000464273 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
PPP1CB-209ENST00000464273 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
PPP1CB-209ENST00000464273 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
PPP1CB-209ENST00000464273 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
PPP1CB-209ENST00000464273 PRKAR2BP31323 418 aa18.79■□□□□ 0.6
PPP1CB-209ENST00000464273 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 MAPK8IP3Q9UPT6 1336 aa18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
PPP1CB-209ENST00000464273 WDR17Q8IZU2 1322 aa18.77■□□□□ 0.6
PPP1CB-209ENST00000464273 ABCC6O95255 1503 aa18.77■□□□□ 0.6
PPP1CB-209ENST00000464273 COL18A1P39060 1754 aa18.77■□□□□ 0.6
PPP1CB-209ENST00000464273 APAF1O14727 1248 aa18.76■□□□□ 0.59
PPP1CB-209ENST00000464273 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
PPP1CB-209ENST00000464273 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
PPP1CB-209ENST00000464273 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
PPP1CB-209ENST00000464273 UNC5CLQ8IV45 518 aa18.75■□□□□ 0.59
PPP1CB-209ENST00000464273 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
PPP1CB-209ENST00000464273 CARD10Q9BWT7 1032 aa18.75■□□□□ 0.59
PPP1CB-209ENST00000464273 USP35Q9P2H5 1018 aa18.75■□□□□ 0.59
PPP1CB-209ENST00000464273 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
PPP1CB-209ENST00000464273 COL5A2P05997 1499 aaPredicted RBP18.74■□□□□ 0.59
PPP1CB-209ENST00000464273 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
PPP1CB-209ENST00000464273 RAPGEF4Q8WZA2 1011 aa18.74■□□□□ 0.59
PPP1CB-209ENST00000464273 NEUROD2Q15784 382 aa18.73■□□□□ 0.59
PPP1CB-209ENST00000464273 FNBP4Q8N3X1 1017 aaPredicted RBP18.73■□□□□ 0.59
PPP1CB-209ENST00000464273 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
PPP1CB-209ENST00000464273 USP21Q9UK80 565 aa18.73■□□□□ 0.59
PPP1CB-209ENST00000464273 LRP6O75581 1613 aa18.72■□□□□ 0.59
PPP1CB-209ENST00000464273 TATP17735 454 aaPredicted RBP18.72■□□□□ 0.59
PPP1CB-209ENST00000464273 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
PPP1CB-209ENST00000464273 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
PPP1CB-209ENST00000464273 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
PPP1CB-209ENST00000464273 KDRP35968 1356 aa18.7■□□□□ 0.58
PPP1CB-209ENST00000464273 AFF2P51816 1311 aa18.7■□□□□ 0.58
PPP1CB-209ENST00000464273 CRB1P82279 1406 aa18.69■□□□□ 0.58
PPP1CB-209ENST00000464273 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
PPP1CB-209ENST00000464273 RIPK4P57078 832 aa18.69■□□□□ 0.58
PPP1CB-209ENST00000464273 SLIT2O94813 1529 aa18.69■□□□□ 0.58
PPP1CB-209ENST00000464273 NFE2L2Q16236 605 aa18.68■□□□□ 0.58
PPP1CB-209ENST00000464273 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
PPP1CB-209ENST00000464273 IL2RBP14784 551 aa18.67■□□□□ 0.58
PPP1CB-209ENST00000464273 VPS72Q15906 364 aa18.67■□□□□ 0.58
PPP1CB-209ENST00000464273 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
PPP1CB-209ENST00000464273 NGEFQ8N5V2 710 aa18.67■□□□□ 0.58
PPP1CB-209ENST00000464273 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
PPP1CB-209ENST00000464273 RGPD1P0DJD0 1748 aa18.66■□□□□ 0.58
PPP1CB-209ENST00000464273 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
PPP1CB-209ENST00000464273 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
PPP1CB-209ENST00000464273 TRPC5Q9UL62 973 aaPredicted RBP18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
PPP1CB-209ENST00000464273 QTRT2Q9H974 415 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms