RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
XRN1-203ENST00000463916 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
XRN1-203ENST00000463916 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
XRN1-203ENST00000463916 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
XRN1-203ENST00000463916 RGPD5Q99666 1765 aa18.1■□□□□ 0.49
XRN1-203ENST00000463916 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
XRN1-203ENST00000463916 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
XRN1-203ENST00000463916 MYOM1P52179 1685 aa18.08■□□□□ 0.49
XRN1-203ENST00000463916 FBLN1P23142 703 aa18.08■□□□□ 0.48
XRN1-203ENST00000463916 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.48
XRN1-203ENST00000463916 CRB1P82279 1406 aa18.08■□□□□ 0.48
XRN1-203ENST00000463916 FYB1O15117 783 aa18.07■□□□□ 0.48
XRN1-203ENST00000463916 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
XRN1-203ENST00000463916 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
XRN1-203ENST00000463916 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
XRN1-203ENST00000463916 THRAP3Q9Y2W1 955 aaKnown RBP18.05■□□□□ 0.48
XRN1-203ENST00000463916 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
XRN1-203ENST00000463916 CCDC125Q86Z20 511 aa18.05■□□□□ 0.48
XRN1-203ENST00000463916 COG3Q96JB2 828 aa18.05■□□□□ 0.48
XRN1-203ENST00000463916 GGNBP2Q9H3C7 697 aa18.05■□□□□ 0.48
XRN1-203ENST00000463916 LTN1O94822 1766 aa18.04■□□□□ 0.48
XRN1-203ENST00000463916 BLMP54132 1417 aaPredicted RBP18.03■□□□□ 0.48
XRN1-203ENST00000463916 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
XRN1-203ENST00000463916 ABCC6O95255 1503 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 ERBB3P21860 1342 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 DEFB132Q7Z7B7 95 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
XRN1-203ENST00000463916 MAP3K19Q56UN5 1328 aa18■□□□□ 0.47
XRN1-203ENST00000463916 PDE3BQ13370 1112 aa18■□□□□ 0.47
XRN1-203ENST00000463916 IP6K1Q92551 441 aa17.99■□□□□ 0.47
XRN1-203ENST00000463916 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
XRN1-203ENST00000463916 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
XRN1-203ENST00000463916 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
XRN1-203ENST00000463916 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
XRN1-203ENST00000463916 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
XRN1-203ENST00000463916 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
XRN1-203ENST00000463916 HOXC9P31274 260 aa17.96■□□□□ 0.47
XRN1-203ENST00000463916 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
XRN1-203ENST00000463916 DISP2A7MBM2 1401 aa17.96■□□□□ 0.46
XRN1-203ENST00000463916 TRIM37O94972 964 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 DDB1Q16531 1140 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
XRN1-203ENST00000463916 LRRC37A3O60309 1634 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 AMPHP49418 695 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 PANK3Q9H999 370 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 WNK3Q9BYP7 1800 aa17.95■□□□□ 0.46
XRN1-203ENST00000463916 CCDC7Q96M83 1385 aa17.94■□□□□ 0.46
XRN1-203ENST00000463916 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
XRN1-203ENST00000463916 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
XRN1-203ENST00000463916 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
XRN1-203ENST00000463916 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
XRN1-203ENST00000463916 TNS1Q9HBL0 1735 aaKnown RBP17.91■□□□□ 0.46
XRN1-203ENST00000463916 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
XRN1-203ENST00000463916 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
XRN1-203ENST00000463916 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
XRN1-203ENST00000463916 BAG6P46379 1132 aa17.9■□□□□ 0.46
XRN1-203ENST00000463916 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
XRN1-203ENST00000463916 EMILIN1Q9Y6C2 1016 aa17.9■□□□□ 0.46
XRN1-203ENST00000463916 EXOC5O00471 708 aa17.89■□□□□ 0.45
XRN1-203ENST00000463916 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
XRN1-203ENST00000463916 IL2RBP14784 551 aa17.89■□□□□ 0.45
XRN1-203ENST00000463916 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
XRN1-203ENST00000463916 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
XRN1-203ENST00000463916 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
XRN1-203ENST00000463916 APBA3O96018 575 aa17.87■□□□□ 0.45
XRN1-203ENST00000463916 NBPF6Q5VWK0 638 aa17.87■□□□□ 0.45
XRN1-203ENST00000463916 NBPF4Q96M43 638 aa17.87■□□□□ 0.45
XRN1-203ENST00000463916 EZH2Q15910 746 aaKnown RBP17.86■□□□□ 0.45
XRN1-203ENST00000463916 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
XRN1-203ENST00000463916 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
XRN1-203ENST00000463916 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
XRN1-203ENST00000463916 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
XRN1-203ENST00000463916 INSRP06213 1382 aa17.85■□□□□ 0.45
XRN1-203ENST00000463916 FLT4P35916 1363 aa17.85■□□□□ 0.45
XRN1-203ENST00000463916 PPM1GO15355 546 aaPredicted RBP17.85■□□□□ 0.45
XRN1-203ENST00000463916 SBF2Q86WG5 1849 aa17.85■□□□□ 0.45
XRN1-203ENST00000463916 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
XRN1-203ENST00000463916 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
XRN1-203ENST00000463916 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
XRN1-203ENST00000463916 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.45
XRN1-203ENST00000463916 BCL9O00512 1426 aa17.83■□□□□ 0.44
XRN1-203ENST00000463916 ANKRD26Q9UPS8 1709 aa17.83■□□□□ 0.44
XRN1-203ENST00000463916 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
XRN1-203ENST00000463916 KCNQ2O43526 872 aa17.81■□□□□ 0.44
XRN1-203ENST00000463916 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
XRN1-203ENST00000463916 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
XRN1-203ENST00000463916 MEGF6O75095 1541 aa17.81■□□□□ 0.44
XRN1-203ENST00000463916 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
XRN1-203ENST00000463916 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
XRN1-203ENST00000463916 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
XRN1-203ENST00000463916 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
XRN1-203ENST00000463916 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
XRN1-203ENST00000463916 NSD2O96028 1365 aa17.78■□□□□ 0.44
XRN1-203ENST00000463916 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
XRN1-203ENST00000463916 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
XRN1-203ENST00000463916 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
XRN1-203ENST00000463916 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
XRN1-203ENST00000463916 PLSCR1O15162 318 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms