RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 IL13P35225 146 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 AMPHP49418 695 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 KIAA0232Q92628 1395 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 AXIN2Q9Y2T1 843 aa19.25■□□□□ 0.67
COL6A1-202ENST00000463060 ABCC6O95255 1503 aa19.25■□□□□ 0.67
COL6A1-202ENST00000463060 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
COL6A1-202ENST00000463060 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
COL6A1-202ENST00000463060 EIF4A2Q14240 407 aaKnown RBP19.23■□□□□ 0.67
COL6A1-202ENST00000463060 LMO7Q8WWI1 1683 aa19.22■□□□□ 0.67
COL6A1-202ENST00000463060 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
COL6A1-202ENST00000463060 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 SPATA31A6Q5VVP1 1343 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-202ENST00000463060 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
COL6A1-202ENST00000463060 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
COL6A1-202ENST00000463060 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL6A1-202ENST00000463060 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 EYA1Q99502 592 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 ERBB3P21860 1342 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 COL14A1Q05707 1796 aaKnown RBP19.16■□□□□ 0.66
COL6A1-202ENST00000463060 LRP6O75581 1613 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 IGSF1Q8N6C5 1336 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NCAPD2Q15021 1401 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
COL6A1-202ENST00000463060 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 FCHSD2O94868 740 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 NBPF6Q5VWK0 638 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
COL6A1-202ENST00000463060 NBPF4Q96M43 638 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 COL5A2P05997 1499 aaPredicted RBP19.13■□□□□ 0.65
COL6A1-202ENST00000463060 KDRP35968 1356 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 SLIT2O94813 1529 aa19.11■□□□□ 0.65
COL6A1-202ENST00000463060 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
COL6A1-202ENST00000463060 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 AEBP1Q8IUX7 1158 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 RGPD2P0DJD1 1756 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
COL6A1-202ENST00000463060 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
COL6A1-202ENST00000463060 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
COL6A1-202ENST00000463060 HMOX1P09601 288 aa19.08■□□□□ 0.64
COL6A1-202ENST00000463060 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.64
COL6A1-202ENST00000463060 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
COL6A1-202ENST00000463060 NWD2Q9ULI1 1742 aa19.07■□□□□ 0.64
COL6A1-202ENST00000463060 NRAPQ86VF7 1730 aa19.06■□□□□ 0.64
COL6A1-202ENST00000463060 LARP1Q6PKG0 1096 aaKnown RBP19.06■□□□□ 0.64
COL6A1-202ENST00000463060 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
COL6A1-202ENST00000463060 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 EVA1CP58658 441 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PNNQ9H307 717 aaKnown RBP19.05■□□□□ 0.64
COL6A1-202ENST00000463060 NLRP2Q9NX02 1062 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
COL6A1-202ENST00000463060 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
COL6A1-202ENST00000463060 CRB1P82279 1406 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 CSB-PGBD3P0DP91 1061 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
COL6A1-202ENST00000463060 TOM1L2Q6ZVM7 507 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 APAF1O14727 1248 aa19.01■□□□□ 0.63
COL6A1-202ENST00000463060 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
COL6A1-202ENST00000463060 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A5Q5VU36 1347 aa18.99■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A7Q8IWB4 1347 aa18.99■□□□□ 0.63
COL6A1-202ENST00000463060 TMPOP42166 694 aaKnown RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 VPS72Q15906 364 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 MEX3CQ5U5Q3 659 aaKnown RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 AFF2P51816 1311 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
COL6A1-202ENST00000463060 USP21Q9UK80 565 aa18.97■□□□□ 0.63
COL6A1-202ENST00000463060 MEGF6O75095 1541 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 MTHFSDQ2M296 383 aaKnown RBP18.96■□□□□ 0.63
COL6A1-202ENST00000463060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.96■□□□□ 0.63
COL6A1-202ENST00000463060 DISP2A7MBM2 1401 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 SENP3-EIF4A1A0A087X0R7 540 aa18.95■□□□□ 0.62
COL6A1-202ENST00000463060 CCDC27Q2M243 656 aa18.95■□□□□ 0.62
COL6A1-202ENST00000463060 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
COL6A1-202ENST00000463060 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms