RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 FAM135BQ49AJ0 1406 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 PNPLA6Q8IY17 1366 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 VAMP4O75379 141 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 KNDC1Q76NI1 1749 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 ESPNB1AK53 854 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 GBP4Q96PP9 640 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 CABP1Q9NZU7 370 aa14.64□□□□□ -0.07
PDZRN3-203ENST00000462146 K7ELQ4 463 aaPredicted RBP14.63□□□□□ -0.07
PDZRN3-203ENST00000462146 RAPGEF3O95398 923 aa14.63□□□□□ -0.07
PDZRN3-203ENST00000462146 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
PDZRN3-203ENST00000462146 CDC42BPGQ6DT37 1551 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 FCHSD2O94868 740 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 GCC1Q96CN9 775 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 GSPT1P15170 499 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 CDK19Q9BWU1 502 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 POLKQ9UBT6 870 aa14.62□□□□□ -0.07
PDZRN3-203ENST00000462146 YTHDC2Q9H6S0 1430 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-203ENST00000462146 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
PDZRN3-203ENST00000462146 HDGFL2Q7Z4V5 671 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-203ENST00000462146 MBIPQ9NS73 344 aa14.61□□□□□ -0.07
PDZRN3-203ENST00000462146 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
PDZRN3-203ENST00000462146 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
PDZRN3-203ENST00000462146 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 BRPF1P55201 1214 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 ABCC4O15439 1325 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 TMEM131LA2VDJ0 1609 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 TRIM44Q96DX7 344 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 FAM83GA6ND36 823 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 ISY1Q9ULR0 285 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-203ENST00000462146 DIP2CQ9Y2E4 1556 aa14.58□□□□□ -0.07
PDZRN3-203ENST00000462146 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 CDC45O75419 566 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 TWISTNBQ3B726 338 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 BAG4O95429 457 aaKnown RBP14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 PLEKHM2Q8IWE5 1019 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 NEO1Q92859 1461 aa14.57□□□□□ -0.08
PDZRN3-203ENST00000462146 PKP1Q13835 747 aa14.56□□□□□ -0.08
PDZRN3-203ENST00000462146 OTUD7AQ8TE49 926 aaPredicted RBP14.56□□□□□ -0.08
PDZRN3-203ENST00000462146 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
PDZRN3-203ENST00000462146 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 WAPLQ7Z5K2 1190 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 ZNF428Q96B54 188 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 DDX49Q9Y6V7 483 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 ALKQ9UM73 1620 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 ZNF853P0CG23 659 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 IFT57Q9NWB7 429 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 GNAI1P63096 354 aa14.55□□□□□ -0.08
PDZRN3-203ENST00000462146 NASPP49321 788 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-203ENST00000462146 APBB1O00213 710 aa14.54□□□□□ -0.08
PDZRN3-203ENST00000462146 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-203ENST00000462146 MCTP1Q6DN14 999 aa14.54□□□□□ -0.08
PDZRN3-203ENST00000462146 IL13P35225 146 aa14.53□□□□□ -0.08
PDZRN3-203ENST00000462146 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
PDZRN3-203ENST00000462146 NME9Q86XW9 330 aa14.53□□□□□ -0.08
PDZRN3-203ENST00000462146 CHAMP1Q96JM3 812 aa14.53□□□□□ -0.08
PDZRN3-203ENST00000462146 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
PDZRN3-203ENST00000462146 SMARCA5O60264 1052 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 HSP90AA2PQ14568 343 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 TTC22Q5TAA0 569 aa14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 SLC52A1Q9NWF4 448 aa14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.08
PDZRN3-203ENST00000462146 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-203ENST00000462146 NCLP19338 710 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-203ENST00000462146 CHMP4BQ9H444 224 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-203ENST00000462146 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 RIMS2Q9UQ26 1411 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 GOLGA6L22H0YM25 854 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 CAVIN1Q6NZI2 390 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 CLEC17AQ6ZS10 378 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 USP26Q9BXU7 913 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 PTMSP20962 102 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 ZGPATQ8N5A5 531 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 DCTPP1Q9H773 170 aa14.51□□□□□ -0.09
PDZRN3-203ENST00000462146 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 CCDC173Q0VFZ6 552 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 ATP10DQ9P241 1426 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 RABEP1Q15276 862 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 PPP1R9BQ96SB3 815 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 API5Q9BZZ5 524 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 RICTORQ6R327 1708 aa14.5□□□□□ -0.09
PDZRN3-203ENST00000462146 CALD1Q05682 793 aaKnown RBP14.49□□□□□ -0.09
PDZRN3-203ENST00000462146 LMBRD1Q9NUN5 540 aa14.49□□□□□ -0.09
PDZRN3-203ENST00000462146 RGS12O14924 1447 aa14.49□□□□□ -0.09
PDZRN3-203ENST00000462146 CYP2E1P05181 493 aaPredicted RBP14.48□□□□□ -0.09
PDZRN3-203ENST00000462146 SDSP20132 328 aa14.48□□□□□ -0.09
PDZRN3-203ENST00000462146 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
PDZRN3-203ENST00000462146 ATP7BP35670 1465 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms