RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 U2AF1Q01081 240 aaKnown RBP eCLIP14.26□□□□□ -0.13
IFT88-204ENST00000461115 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
IFT88-204ENST00000461115 RGPD1P0DJD0 1748 aa14.26□□□□□ -0.13
IFT88-204ENST00000461115 IL13P35225 146 aa14.24□□□□□ -0.13
IFT88-204ENST00000461115 IL16Q14005 1332 aa14.23□□□□□ -0.13
IFT88-204ENST00000461115 PEAK1Q9H792 1746 aa14.23□□□□□ -0.13
IFT88-204ENST00000461115 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
IFT88-204ENST00000461115 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
IFT88-204ENST00000461115 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
IFT88-204ENST00000461115 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
IFT88-204ENST00000461115 EMILIN1Q9Y6C2 1016 aa14.22□□□□□ -0.13
IFT88-204ENST00000461115 NCOA3Q9Y6Q9 1424 aa14.21□□□□□ -0.13
IFT88-204ENST00000461115 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
IFT88-204ENST00000461115 DLG5Q8TDM6 1919 aa14.2□□□□□ -0.14
IFT88-204ENST00000461115 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
IFT88-204ENST00000461115 U2SURPO15042 1029 aaKnown RBP14.18□□□□□ -0.14
IFT88-204ENST00000461115 PHRF1Q9P1Y6 1649 aaKnown RBP14.18□□□□□ -0.14
IFT88-204ENST00000461115 FBLN1P23142 703 aa14.17□□□□□ -0.14
IFT88-204ENST00000461115 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.17□□□□□ -0.14
IFT88-204ENST00000461115 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
IFT88-204ENST00000461115 MST1RQ04912 1400 aa14.17□□□□□ -0.14
IFT88-204ENST00000461115 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
IFT88-204ENST00000461115 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
IFT88-204ENST00000461115 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
IFT88-204ENST00000461115 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
IFT88-204ENST00000461115 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
IFT88-204ENST00000461115 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
IFT88-204ENST00000461115 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 EXOC6Q8TAG9 804 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 DCCP43146 1447 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 FLT4P35916 1363 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 RRS1Q15050 365 aaKnown RBP14.15□□□□□ -0.14
IFT88-204ENST00000461115 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
IFT88-204ENST00000461115 TRPM3Q9HCF6 1732 aaPredicted RBP14.14□□□□□ -0.15
IFT88-204ENST00000461115 KDRP35968 1356 aa14.14□□□□□ -0.15
IFT88-204ENST00000461115 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
IFT88-204ENST00000461115 NFE2L2Q16236 605 aa14.14□□□□□ -0.15
IFT88-204ENST00000461115 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
IFT88-204ENST00000461115 RIPK4P57078 832 aa14.13□□□□□ -0.15
IFT88-204ENST00000461115 EIF4A2Q14240 407 aaKnown RBP14.13□□□□□ -0.15
IFT88-204ENST00000461115 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
IFT88-204ENST00000461115 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
IFT88-204ENST00000461115 RTL1A6NKG5 1358 aa14.12□□□□□ -0.15
IFT88-204ENST00000461115 MAP3K19Q56UN5 1328 aa14.12□□□□□ -0.15
IFT88-204ENST00000461115 RARSP54136 660 aaKnown RBP14.12□□□□□ -0.15
IFT88-204ENST00000461115 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
IFT88-204ENST00000461115 CCDC136Q96JN2 1154 aa14.12□□□□□ -0.15
IFT88-204ENST00000461115 NFAT5O94916 1531 aa14.12□□□□□ -0.15
IFT88-204ENST00000461115 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
IFT88-204ENST00000461115 PLIN1O60240 522 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 SLIT3O75094 1523 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 LTN1O94822 1766 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
IFT88-204ENST00000461115 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
IFT88-204ENST00000461115 NEFMP07197 916 aa14.1□□□□□ -0.15
IFT88-204ENST00000461115 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
IFT88-204ENST00000461115 C19orf44Q9H6X5 657 aa14.1□□□□□ -0.15
IFT88-204ENST00000461115 BCAR3O75815 825 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
IFT88-204ENST00000461115 AAMPQ13685 434 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 C20orf194Q5TEA3 1177 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 ZNF428Q96B54 188 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 C1orf167Q5SNV9 1468 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
IFT88-204ENST00000461115 IGSF1Q8N6C5 1336 aa14.09□□□□□ -0.15
IFT88-204ENST00000461115 LMTK3Q96Q04 1460 aa14.08□□□□□ -0.15
IFT88-204ENST00000461115 EVX2Q03828 476 aa14.08□□□□□ -0.15
IFT88-204ENST00000461115 LMOD3Q0VAK6 560 aa14.08□□□□□ -0.15
IFT88-204ENST00000461115 HSP90AB2PQ58FF8 381 aa14.08□□□□□ -0.15
IFT88-204ENST00000461115 ALS2Q96Q42 1657 aa14.08□□□□□ -0.16
IFT88-204ENST00000461115 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
IFT88-204ENST00000461115 NLRP6P59044 892 aa14.07□□□□□ -0.16
IFT88-204ENST00000461115 HMOX1P09601 288 aa14.07□□□□□ -0.16
IFT88-204ENST00000461115 PROSER2Q86WR7 435 aaPredicted RBP14.07□□□□□ -0.16
IFT88-204ENST00000461115 IFT57Q9NWB7 429 aa14.07□□□□□ -0.16
IFT88-204ENST00000461115 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
IFT88-204ENST00000461115 USP19O94966 1318 aa14.05□□□□□ -0.16
IFT88-204ENST00000461115 KDM2BQ8NHM5 1336 aa14.05□□□□□ -0.16
IFT88-204ENST00000461115 GNAI1P63096 354 aa14.05□□□□□ -0.16
IFT88-204ENST00000461115 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
IFT88-204ENST00000461115 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 HOXC9P31274 260 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 SULT6B1Q6IMI4 303 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 KCNH5Q8NCM2 988 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 TMEM94Q12767 1356 aa14.04□□□□□ -0.16
IFT88-204ENST00000461115 LRRC37A3O60309 1634 aa14.03□□□□□ -0.16
IFT88-204ENST00000461115 CAMTA1Q9Y6Y1 1673 aa14.03□□□□□ -0.16
IFT88-204ENST00000461115 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
IFT88-204ENST00000461115 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
IFT88-204ENST00000461115 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
IFT88-204ENST00000461115 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
IFT88-204ENST00000461115 PSME1Q06323 249 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms