RNA–Protein interactions for RNA: ENST00000460669.5

RBBP4-207, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-207ENST00000460669 TOR4AQ9NXH8 423 aa6.79□□□□□ -1.32
RBBP4-207ENST00000460669 MCCD1P59942 119 aaPredicted RBP6.78□□□□□ -1.32
RBBP4-207ENST00000460669 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
RBBP4-207ENST00000460669 SLC10A4Q96EP9 437 aa6.78□□□□□ -1.32
RBBP4-207ENST00000460669 ALG2Q9H553 416 aa6.78□□□□□ -1.32
RBBP4-207ENST00000460669 ZNF777Q9ULD5 760 aaPredicted RBP6.78□□□□□ -1.32
RBBP4-207ENST00000460669 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
RBBP4-207ENST00000460669 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
RBBP4-207ENST00000460669 MPNDQ8N594 471 aa6.77□□□□□ -1.33
RBBP4-207ENST00000460669 C1orf115Q9H7X2 142 aa6.77□□□□□ -1.33
RBBP4-207ENST00000460669 PCDHB9Q9Y5E1 797 aa6.77□□□□□ -1.33
RBBP4-207ENST00000460669 ARID3CA6NKF2 412 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 SIAH2O43255 324 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 ARID5BQ14865 1188 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 DZIP3Q86Y13 1208 aaKnown RBP6.76□□□□□ -1.33
RBBP4-207ENST00000460669 CDV3Q9UKY7 258 aaKnown RBP6.76□□□□□ -1.33
RBBP4-207ENST00000460669 MAP4K5Q9Y4K4 846 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 TLL2Q9Y6L7 1015 aa6.76□□□□□ -1.33
RBBP4-207ENST00000460669 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
RBBP4-207ENST00000460669 HDGFL1Q5TGJ6 251 aa6.75□□□□□ -1.33
RBBP4-207ENST00000460669 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
RBBP4-207ENST00000460669 CDK15Q96Q40 435 aa6.75□□□□□ -1.33
RBBP4-207ENST00000460669 AVPP01185 164 aa6.74□□□□□ -1.33
RBBP4-207ENST00000460669 NBPF20Q3BBV1 942 aa6.74□□□□□ -1.33
RBBP4-207ENST00000460669 SNIP1Q8TAD8 396 aaKnown RBP6.74□□□□□ -1.33
RBBP4-207ENST00000460669 ESPNB1AK53 854 aa6.73□□□□□ -1.33
RBBP4-207ENST00000460669 CRIPAKQ8N1N5 446 aa6.73□□□□□ -1.33
RBBP4-207ENST00000460669 UCN2Q96RP3 112 aa6.73□□□□□ -1.33
RBBP4-207ENST00000460669 CEP126Q9P2H0 1117 aa6.73□□□□□ -1.33
RBBP4-207ENST00000460669 GMPR2Q9P2T1 348 aaKnown RBP6.73□□□□□ -1.33
RBBP4-207ENST00000460669 WASF2Q9Y6W5 498 aa6.73□□□□□ -1.33
RBBP4-207ENST00000460669 ADH1CP00326 375 aa6.72□□□□□ -1.33
RBBP4-207ENST00000460669 SMPD1P17405 629 aa6.72□□□□□ -1.33
RBBP4-207ENST00000460669 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
RBBP4-207ENST00000460669 VASH1Q7L8A9 365 aaPredicted RBP6.72□□□□□ -1.33
RBBP4-207ENST00000460669 J3QL48 77 aa6.71□□□□□ -1.34
RBBP4-207ENST00000460669 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
RBBP4-207ENST00000460669 CCDC82Q8N4S0 544 aa6.71□□□□□ -1.34
RBBP4-207ENST00000460669 NFATC2IPQ8NCF5 419 aa6.71□□□□□ -1.34
RBBP4-207ENST00000460669 KCTD15Q96SI1 283 aaPredicted RBP6.71□□□□□ -1.34
RBBP4-207ENST00000460669 AXIN1O15169 862 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 GIGYF1O75420 1035 aaPredicted RBP6.7□□□□□ -1.34
RBBP4-207ENST00000460669 FSHRP23945 695 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 GRM5P41594 1212 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 TREML4Q6UXN2 200 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 PHTF2Q8N3S3 785 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
RBBP4-207ENST00000460669 SERPINA10Q9UK55 444 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
RBBP4-207ENST00000460669 PIK3CDO00329 1044 aa6.69□□□□□ -1.34
RBBP4-207ENST00000460669 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
RBBP4-207ENST00000460669 RAB15P59190 212 aa6.69□□□□□ -1.34
RBBP4-207ENST00000460669 NR5A1Q13285 461 aa6.69□□□□□ -1.34
RBBP4-207ENST00000460669 INTS6LQ5JSJ4 861 aaKnown RBP6.69□□□□□ -1.34
RBBP4-207ENST00000460669 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
RBBP4-207ENST00000460669 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
RBBP4-207ENST00000460669 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
RBBP4-207ENST00000460669 PPP1R12CQ9BZL4 782 aa6.68□□□□□ -1.34
RBBP4-207ENST00000460669 PALM3A6NDB9 673 aaPredicted RBP6.67□□□□□ -1.34
RBBP4-207ENST00000460669 ATP9BO43861 1147 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 NR3C2P08235 984 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 NNTQ13423 1086 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 CTC1Q2NKJ3 1217 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 TBC1D9Q6ZT07 1266 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 HPS1Q92902 700 aa6.67□□□□□ -1.34
RBBP4-207ENST00000460669 CCDC85AQ96PX6 553 aaPredicted RBP6.67□□□□□ -1.34
RBBP4-207ENST00000460669 C11orf95C9JLR9 678 aaPredicted RBP6.66□□□□□ -1.34
RBBP4-207ENST00000460669 DHX9Q08211 1270 aaKnown RBP6.66□□□□□ -1.34
RBBP4-207ENST00000460669 MAP7D1Q3KQU3 841 aa6.66□□□□□ -1.34
RBBP4-207ENST00000460669 CFAP70Q5T0N1 1121 aa6.66□□□□□ -1.34
RBBP4-207ENST00000460669 CCDC116Q8IYX3 515 aa6.66□□□□□ -1.34
RBBP4-207ENST00000460669 PLPP7Q8NBV4 271 aa6.66□□□□□ -1.34
RBBP4-207ENST00000460669 MAFBQ9Y5Q3 323 aaPredicted RBP6.66□□□□□ -1.34
RBBP4-207ENST00000460669 USP17L5A8MUK1 530 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 ERVH48-1M5A8F1 160 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 SKIP12755 728 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 SNRPBP14678 240 aaKnown RBP6.65□□□□□ -1.34
RBBP4-207ENST00000460669 PLEKHM2Q8IWE5 1019 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 ATP13A2Q9NQ11 1180 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
RBBP4-207ENST00000460669 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.34
RBBP4-207ENST00000460669 USP17L3A6NCW0 530 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 USP17L4A6NCW7 530 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 LZTS3O60299 673 aaPredicted RBP6.64□□□□□ -1.35
RBBP4-207ENST00000460669 PPP1R26Q5T8A7 1209 aaPredicted RBP6.64□□□□□ -1.35
RBBP4-207ENST00000460669 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 USP17L2Q6R6M4 530 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 USP17L1Q7RTZ2 530 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 PCDHB11Q9Y5F2 797 aa6.64□□□□□ -1.35
RBBP4-207ENST00000460669 WDR4P57081 412 aaKnown RBP6.63□□□□□ -1.35
RBBP4-207ENST00000460669 TSGA10IPQ3SY00 556 aa6.63□□□□□ -1.35
RBBP4-207ENST00000460669 TRIM52Q96A61 297 aa6.63□□□□□ -1.35
RBBP4-207ENST00000460669 KLF16Q9BXK1 252 aaPredicted RBP6.63□□□□□ -1.35
RBBP4-207ENST00000460669 EMILIN1Q9Y6C2 1016 aa6.63□□□□□ -1.35
RBBP4-207ENST00000460669 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
RBBP4-207ENST00000460669 ERVK-9P63128 1117 aa6.62□□□□□ -1.35
RBBP4-207ENST00000460669 NFX1Q12986 1120 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms