RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
COL5A1-203ENST00000460264 LTN1O94822 1766 aa26.61■■□□□ 1.85
COL5A1-203ENST00000460264 NME9Q86XW9 330 aa26.61■■□□□ 1.85
COL5A1-203ENST00000460264 TCP11L2Q8N4U5 519 aa26.61■■□□□ 1.85
COL5A1-203ENST00000460264 ZRANB1Q9UGI0 708 aa26.61■■□□□ 1.85
COL5A1-203ENST00000460264 TNS1Q9HBL0 1735 aaKnown RBP26.61■■□□□ 1.85
COL5A1-203ENST00000460264 FAM182BQ5T319 152 aa26.6■■□□□ 1.85
COL5A1-203ENST00000460264 SF3B2Q13435 895 aaKnown RBP26.59■■□□□ 1.85
COL5A1-203ENST00000460264 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
COL5A1-203ENST00000460264 AXIN2Q9Y2T1 843 aa26.58■■□□□ 1.85
COL5A1-203ENST00000460264 DEFB132Q7Z7B7 95 aa26.57■■□□□ 1.84
COL5A1-203ENST00000460264 OVOS2A0A0J9YW53 1432 aa26.56■■□□□ 1.84
COL5A1-203ENST00000460264 OVOS2Q6IE36 1432 aa26.56■■□□□ 1.84
COL5A1-203ENST00000460264 TMF1P82094 1093 aa26.56■■□□□ 1.84
COL5A1-203ENST00000460264 LRRC37A3O60309 1634 aa26.56■■□□□ 1.84
COL5A1-203ENST00000460264 WDR17Q8IZU2 1322 aa26.55■■□□□ 1.84
COL5A1-203ENST00000460264 TOM1L2Q6ZVM7 507 aa26.53■■□□□ 1.84
COL5A1-203ENST00000460264 CCER1Q8TC90 406 aaPredicted RBP26.53■■□□□ 1.84
COL5A1-203ENST00000460264 ANKRD36BQ8N2N9 1353 aa26.53■■□□□ 1.84
COL5A1-203ENST00000460264 MYOM1P52179 1685 aa26.53■■□□□ 1.84
COL5A1-203ENST00000460264 PDE3BQ13370 1112 aa26.51■■□□□ 1.83
COL5A1-203ENST00000460264 FAM196AQ6ZSG2 479 aa26.5■■□□□ 1.83
COL5A1-203ENST00000460264 PEAK1Q9H792 1746 aa26.49■■□□□ 1.83
COL5A1-203ENST00000460264 BAG6P46379 1132 aa26.49■■□□□ 1.83
COL5A1-203ENST00000460264 DISP2A7MBM2 1401 aa26.48■■□□□ 1.83
COL5A1-203ENST00000460264 CDCA8Q53HL2 280 aa26.47■■□□□ 1.83
COL5A1-203ENST00000460264 CSB-PGBD3P0DP91 1061 aa26.46■■□□□ 1.83
COL5A1-203ENST00000460264 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
COL5A1-203ENST00000460264 CARD10Q9BWT7 1032 aa26.45■■□□□ 1.82
COL5A1-203ENST00000460264 TRIM37O94972 964 aa26.44■■□□□ 1.82
COL5A1-203ENST00000460264 ERBB3P21860 1342 aa26.43■■□□□ 1.82
COL5A1-203ENST00000460264 SBF2Q86WG5 1849 aa26.43■■□□□ 1.82
COL5A1-203ENST00000460264 OVOS2A0A0G2JMS6 1433 aa26.42■■□□□ 1.82
COL5A1-203ENST00000460264 CCDC7Q96M83 1385 aa26.42■■□□□ 1.82
COL5A1-203ENST00000460264 FAM208AQ9UK61 1670 aaKnown RBP26.41■■□□□ 1.82
COL5A1-203ENST00000460264 EN1Q05925 392 aaPredicted RBP26.41■■□□□ 1.82
COL5A1-203ENST00000460264 COG3Q96JB2 828 aa26.41■■□□□ 1.82
COL5A1-203ENST00000460264 CDCA7Q9BWT1 371 aaPredicted RBP26.41■■□□□ 1.82
COL5A1-203ENST00000460264 DDB1Q16531 1140 aa26.4■■□□□ 1.82
COL5A1-203ENST00000460264 RREB1Q92766 1687 aa26.38■■□□□ 1.81
COL5A1-203ENST00000460264 C11orf95C9JLR9 678 aaPredicted RBP26.36■■□□□ 1.81
COL5A1-203ENST00000460264 FYB1O15117 783 aa26.36■■□□□ 1.81
COL5A1-203ENST00000460264 ANKRD24Q8TF21 1146 aa26.36■■□□□ 1.81
COL5A1-203ENST00000460264 TNS2Q63HR2 1409 aa26.35■■□□□ 1.81
COL5A1-203ENST00000460264 IP6K1Q92551 441 aa26.35■■□□□ 1.81
COL5A1-203ENST00000460264 NLRP2Q9NX02 1062 aa26.35■■□□□ 1.81
COL5A1-203ENST00000460264 MAP3K19Q56UN5 1328 aa26.35■■□□□ 1.81
COL5A1-203ENST00000460264 PARD3Q8TEW0 1356 aa26.34■■□□□ 1.81
COL5A1-203ENST00000460264 APBA3O96018 575 aa26.34■■□□□ 1.81
COL5A1-203ENST00000460264 GGNBP2Q9H3C7 697 aa26.34■■□□□ 1.81
COL5A1-203ENST00000460264 NUP188Q5SRE5 1749 aa26.34■■□□□ 1.81
COL5A1-203ENST00000460264 SRCAPQ6ZRS2 3230 aa26.33■■□□□ 1.81
COL5A1-203ENST00000460264 EZH2Q15910 746 aaKnown RBP26.33■■□□□ 1.81
COL5A1-203ENST00000460264 CAMKK2Q96RR4 588 aa26.33■■□□□ 1.81
COL5A1-203ENST00000460264 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.8
COL5A1-203ENST00000460264 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.8
COL5A1-203ENST00000460264 NSD3Q9BZ95 1437 aa26.32■■□□□ 1.8
COL5A1-203ENST00000460264 FBLN1P23142 703 aa26.32■■□□□ 1.8
COL5A1-203ENST00000460264 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
COL5A1-203ENST00000460264 MARCH10Q8NA82 808 aaPredicted RBP26.32■■□□□ 1.8
COL5A1-203ENST00000460264 CARD14Q9BXL6 1004 aa26.32■■□□□ 1.8
COL5A1-203ENST00000460264 BCL9O00512 1426 aa26.31■■□□□ 1.8
COL5A1-203ENST00000460264 RGPD2P0DJD1 1756 aa26.31■■□□□ 1.8
COL5A1-203ENST00000460264 RTL1A6NKG5 1358 aa26.31■■□□□ 1.8
COL5A1-203ENST00000460264 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
COL5A1-203ENST00000460264 HOXC9P31274 260 aa26.29■■□□□ 1.8
COL5A1-203ENST00000460264 EXOC5O00471 708 aa26.28■■□□□ 1.8
COL5A1-203ENST00000460264 AMPHP49418 695 aa26.28■■□□□ 1.8
COL5A1-203ENST00000460264 IL2RBP14784 551 aa26.27■■□□□ 1.8
COL5A1-203ENST00000460264 PSDA5PKW4 1024 aaPredicted RBP26.26■■□□□ 1.79
COL5A1-203ENST00000460264 RRS1Q15050 365 aaKnown RBP26.26■■□□□ 1.79
COL5A1-203ENST00000460264 LTV1Q96GA3 475 aaPredicted RBP26.26■■□□□ 1.79
COL5A1-203ENST00000460264 LRP5O75197 1615 aa26.25■■□□□ 1.79
COL5A1-203ENST00000460264 NHSQ6T4R5 1651 aa26.25■■□□□ 1.79
COL5A1-203ENST00000460264 ANKRD26Q9UPS8 1709 aa26.24■■□□□ 1.79
COL5A1-203ENST00000460264 PTF1AQ7RTS3 328 aa26.23■■□□□ 1.79
COL5A1-203ENST00000460264 POLR3GLQ9BT43 218 aa26.23■■□□□ 1.79
COL5A1-203ENST00000460264 BCL11BQ9C0K0 894 aaPredicted RBP26.23■■□□□ 1.79
COL5A1-203ENST00000460264 R3HDM1Q15032 1099 aaKnown RBP26.2■■□□□ 1.78
COL5A1-203ENST00000460264 SHANK3Q9BYB0 1731 aa26.19■■□□□ 1.78
COL5A1-203ENST00000460264 CGNL1Q0VF96 1302 aa26.19■■□□□ 1.78
COL5A1-203ENST00000460264 FLT4P35916 1363 aa26.19■■□□□ 1.78
COL5A1-203ENST00000460264 KIF24Q5T7B8 1368 aa26.19■■□□□ 1.78
COL5A1-203ENST00000460264 SMG6Q86US8 1419 aaKnown RBP26.18■■□□□ 1.78
COL5A1-203ENST00000460264 MAP2P11137 1827 aaKnown RBP26.17■■□□□ 1.78
COL5A1-203ENST00000460264 PLSCR1O15162 318 aa26.17■■□□□ 1.78
COL5A1-203ENST00000460264 INSRP06213 1382 aa26.17■■□□□ 1.78
COL5A1-203ENST00000460264 MEGF6O75095 1541 aa26.16■■□□□ 1.78
COL5A1-203ENST00000460264 BTAF1O14981 1849 aa26.15■■□□□ 1.78
COL5A1-203ENST00000460264 HSP90AB2PQ58FF8 381 aa26.14■■□□□ 1.78
COL5A1-203ENST00000460264 KAT6BQ8WYB5 2073 aa26.13■■□□□ 1.77
COL5A1-203ENST00000460264 KCNQ2O43526 872 aa26.12■■□□□ 1.77
COL5A1-203ENST00000460264 NBPF6Q5VWK0 638 aa26.12■■□□□ 1.77
COL5A1-203ENST00000460264 NBPF4Q96M43 638 aa26.12■■□□□ 1.77
COL5A1-203ENST00000460264 EMILIN1Q9Y6C2 1016 aa26.12■■□□□ 1.77
COL5A1-203ENST00000460264 DOT1LQ8TEK3 1739 aa26.11■■□□□ 1.77
COL5A1-203ENST00000460264 NBPF14Q5TI25 921 aa26.1■■□□□ 1.77
COL5A1-203ENST00000460264 ACSBG1Q96GR2 724 aa26.1■■□□□ 1.77
COL5A1-203ENST00000460264 PANK3Q9H999 370 aa26.1■■□□□ 1.77
COL5A1-203ENST00000460264 USHBP1Q8N6Y0 703 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms