RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 COG3Q96JB2 828 aa9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 GJD4Q96KN9 370 aaPredicted RBP9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 MAP3K19Q56UN5 1328 aa9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 SPATA31A5Q5VU36 1347 aa9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 SPATA31A7Q8IWB4 1347 aa9.78□□□□□ -0.84
GAPDHP53-201ENST00000458397 NSD2O96028 1365 aa9.77□□□□□ -0.84
GAPDHP53-201ENST00000458397 SOX12O15370 315 aa9.77□□□□□ -0.85
GAPDHP53-201ENST00000458397 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
GAPDHP53-201ENST00000458397 RXRBP28702 533 aa9.77□□□□□ -0.85
GAPDHP53-201ENST00000458397 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 LTN1O94822 1766 aa9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 LARP1Q6PKG0 1096 aaKnown RBP9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 THSD7AQ9UPZ6 1657 aa9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
GAPDHP53-201ENST00000458397 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 BLMP54132 1417 aaPredicted RBP9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 SMG6Q86US8 1419 aaKnown RBP9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 IP6K1Q92551 441 aa9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 ERBB3P21860 1342 aa9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 WDR17Q8IZU2 1322 aa9.75□□□□□ -0.85
GAPDHP53-201ENST00000458397 CRB1P82279 1406 aa9.74□□□□□ -0.85
GAPDHP53-201ENST00000458397 HOXC9P31274 260 aa9.74□□□□□ -0.85
GAPDHP53-201ENST00000458397 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
GAPDHP53-201ENST00000458397 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
GAPDHP53-201ENST00000458397 KIF24Q5T7B8 1368 aa9.74□□□□□ -0.85
GAPDHP53-201ENST00000458397 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
GAPDHP53-201ENST00000458397 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
GAPDHP53-201ENST00000458397 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
GAPDHP53-201ENST00000458397 ZBTB7CA1YPR0 619 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 INSRP06213 1382 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 FLT4P35916 1363 aa9.72□□□□□ -0.85
GAPDHP53-201ENST00000458397 FAM98CQ17RN3 349 aaKnown RBP9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 NCAPD2Q15021 1401 aa9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.86
GAPDHP53-201ENST00000458397 EVA1CP58658 441 aa9.7□□□□□ -0.86
GAPDHP53-201ENST00000458397 HSP90AB2PQ58FF8 381 aa9.7□□□□□ -0.86
GAPDHP53-201ENST00000458397 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
GAPDHP53-201ENST00000458397 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
GAPDHP53-201ENST00000458397 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
GAPDHP53-201ENST00000458397 AMPHP49418 695 aa9.69□□□□□ -0.86
GAPDHP53-201ENST00000458397 BRWD3Q6RI45 1802 aa9.69□□□□□ -0.86
GAPDHP53-201ENST00000458397 TOM1L2Q6ZVM7 507 aa9.69□□□□□ -0.86
GAPDHP53-201ENST00000458397 MORC1Q86VD1 984 aa9.69□□□□□ -0.86
GAPDHP53-201ENST00000458397 PARP4Q9UKK3 1724 aaKnown RBP9.69□□□□□ -0.86
GAPDHP53-201ENST00000458397 LRRC37A3O60309 1634 aa9.68□□□□□ -0.86
GAPDHP53-201ENST00000458397 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
GAPDHP53-201ENST00000458397 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
GAPDHP53-201ENST00000458397 COL3A1P02461 1466 aaPredicted RBP9.67□□□□□ -0.86
GAPDHP53-201ENST00000458397 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
GAPDHP53-201ENST00000458397 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
GAPDHP53-201ENST00000458397 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
GAPDHP53-201ENST00000458397 MAP2P11137 1827 aaKnown RBP9.67□□□□□ -0.86
GAPDHP53-201ENST00000458397 MEGF6O75095 1541 aa9.66□□□□□ -0.86
GAPDHP53-201ENST00000458397 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
GAPDHP53-201ENST00000458397 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
GAPDHP53-201ENST00000458397 LTV1Q96GA3 475 aaPredicted RBP9.66□□□□□ -0.86
GAPDHP53-201ENST00000458397 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
GAPDHP53-201ENST00000458397 TNS2Q63HR2 1409 aa9.65□□□□□ -0.86
GAPDHP53-201ENST00000458397 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
GAPDHP53-201ENST00000458397 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.86
GAPDHP53-201ENST00000458397 KRT27Q7Z3Y8 459 aa9.65□□□□□ -0.86
GAPDHP53-201ENST00000458397 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
GAPDHP53-201ENST00000458397 RGPD1P0DJD0 1748 aa9.65□□□□□ -0.87
GAPDHP53-201ENST00000458397 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.87
GAPDHP53-201ENST00000458397 BCL9O00512 1426 aa9.65□□□□□ -0.87
GAPDHP53-201ENST00000458397 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
GAPDHP53-201ENST00000458397 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
GAPDHP53-201ENST00000458397 IGSF1Q8N6C5 1336 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 PPM1GO15355 546 aaPredicted RBP9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 IL2RBP14784 551 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 IL13P35225 146 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 MTHFSP49914 203 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 EYA1Q99502 592 aa9.63□□□□□ -0.87
GAPDHP53-201ENST00000458397 SHANK3Q9BYB0 1731 aa9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 MARCH10Q8NA82 808 aaPredicted RBP9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 KDRP35968 1356 aa9.62□□□□□ -0.87
GAPDHP53-201ENST00000458397 A0A0G2JS52 829 aa9.61□□□□□ -0.87
GAPDHP53-201ENST00000458397 MYT1Q01538 1121 aa9.61□□□□□ -0.87
GAPDHP53-201ENST00000458397 DDB1Q16531 1140 aa9.61□□□□□ -0.87
GAPDHP53-201ENST00000458397 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
GAPDHP53-201ENST00000458397 PKD1L3Q7Z443 1732 aa9.6□□□□□ -0.87
GAPDHP53-201ENST00000458397 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.87
GAPDHP53-201ENST00000458397 PDE3BQ13370 1112 aa9.59□□□□□ -0.87
GAPDHP53-201ENST00000458397 CNGB1Q14028 1251 aaPredicted RBP9.59□□□□□ -0.87
GAPDHP53-201ENST00000458397 FAM196AQ6ZSG2 479 aa9.59□□□□□ -0.87
GAPDHP53-201ENST00000458397 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms